BLASTX nr result

ID: Cimicifuga21_contig00015525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015525
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR10861.1| putative transposase [Oryza sativa Japonica Group]      65   6e-09
gb|EEE59391.1| hypothetical protein OsJ_11516 [Oryza sativa Japo...    65   6e-09
ref|NP_001050533.1| Os03g0576100 [Oryza sativa Japonica Group] g...    65   6e-09
emb|CAN81957.1| hypothetical protein VITISV_043100 [Vitis vinifera]    64   1e-08
emb|CAN62918.1| hypothetical protein VITISV_029735 [Vitis vinifera]    64   1e-08

>gb|AAR10861.1| putative transposase [Oryza sativa Japonica Group]
          Length = 813

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
 Frame = -1

Query: 211 GGDTIGFDQRDCYNHLNSTRKYKTTKDGDATAALTYFKRKSVEDPQFFYNIQTDTE-GRA 35
           G D + F + DC N +   RK K  +  D    L Y + K +EDP FFY IQ D E GR 
Sbjct: 224 GADKVPFSKMDCNNEIGRERK-KYLESNDTQTLLEYLRNKQLEDPTFFYAIQVDKEDGRI 282

Query: 34  VNFFWVDGRS 5
            NFFW DG+S
Sbjct: 283 ANFFWADGQS 292


>gb|EEE59391.1| hypothetical protein OsJ_11516 [Oryza sativa Japonica Group]
          Length = 790

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
 Frame = -1

Query: 211 GGDTIGFDQRDCYNHLNSTRKYKTTKDGDATAALTYFKRKSVEDPQFFYNIQTDTE-GRA 35
           G D + F + DC N +   RK K  +  D    L Y + K +EDP FFY IQ D E GR 
Sbjct: 170 GADKVPFSKMDCNNEIGRERK-KYLESNDTQTLLEYLRNKQLEDPTFFYAIQVDKEDGRI 228

Query: 34  VNFFWVDGRS 5
            NFFW DG+S
Sbjct: 229 ANFFWADGQS 238


>ref|NP_001050533.1| Os03g0576100 [Oryza sativa Japonica Group]
           gi|108709452|gb|ABF97247.1| transposon protein,
           putative, unclassified, expressed [Oryza sativa Japonica
           Group] gi|113549004|dbj|BAF12447.1| Os03g0576100 [Oryza
           sativa Japonica Group] gi|215713603|dbj|BAG94740.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 777

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
 Frame = -1

Query: 211 GGDTIGFDQRDCYNHLNSTRKYKTTKDGDATAALTYFKRKSVEDPQFFYNIQTDTE-GRA 35
           G D + F + DC N +   RK K  +  D    L Y + K +EDP FFY IQ D E GR 
Sbjct: 224 GADKVPFSKMDCNNEIGRERK-KYLESNDTQTLLEYLRNKQLEDPTFFYAIQVDKEDGRI 282

Query: 34  VNFFWVDGRS 5
            NFFW DG+S
Sbjct: 283 ANFFWADGQS 292


>emb|CAN81957.1| hypothetical protein VITISV_043100 [Vitis vinifera]
          Length = 702

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/70 (44%), Positives = 39/70 (55%)
 Frame = -1

Query: 211 GGDTIGFDQRDCYNHLNSTRKYKTTKDGDATAALTYFKRKSVEDPQFFYNIQTDTEGRAV 32
           G + +GF Q+D YNH+++ R+ +  KDGDA AAL Y   K   D  FFY    D E R  
Sbjct: 227 GHEHVGFTQKDIYNHVDAMRRSEI-KDGDAEAALAYLCGKXEMDSSFFYKFNIDEESRLA 285

Query: 31  NFFWVDGRSR 2
           N FW D   R
Sbjct: 286 NLFWADSTXR 295


>emb|CAN62918.1| hypothetical protein VITISV_029735 [Vitis vinifera]
          Length = 742

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/66 (45%), Positives = 39/66 (59%)
 Frame = -1

Query: 199 IGFDQRDCYNHLNSTRKYKTTKDGDATAALTYFKRKSVEDPQFFYNIQTDTEGRAVNFFW 20
           +GF Q+D YNH+++ R+ +  KDGDA AAL Y   K+  D  FFY    D E R  N FW
Sbjct: 183 VGFTQKDIYNHVDAMRRSEI-KDGDAEAALAYLCGKAEMDSSFFYKFNIDEESRLANLFW 241

Query: 19  VDGRSR 2
            D  +R
Sbjct: 242 ADSTAR 247


Top