BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015223
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi...   298   1e-78
ref|XP_002531596.1| pentatricopeptide repeat-containing protein,...   286   4e-75
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...   284   2e-74
ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   281   1e-73
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]   281   1e-73

>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 461

 Score =  298 bits (762), Expect = 1e-78
 Identities = 133/252 (52%), Positives = 192/252 (76%), Gaps = 1/252 (0%)
 Frame = +1

Query: 10  VKRDTLYSRISPIGDPRVSVVPVLQQWIQEGKTVTGDEIKSMIKQLRIFRRFKHALEISQ 189
           V +D LY RISP+GDP +SV P+L QW+ EG+ V  DE++ +IK+LR+++RFKHALEIS+
Sbjct: 26  VVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISK 85

Query: 190 WMSDRRSIVLSPGDIATRLGLISKVHGIEQAEKYFDNIPKQSKIFPVYFSLLNCYGQSKS 369
           WMSD+R   LS  DIA R+ LI +VHG+EQ E YFDN+P Q K + V+ +LLNCY   K 
Sbjct: 86  WMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKC 145

Query: 370 VEKAELLMQQVRELGFAISPLAYNIMLSLYSKVGQYQKLDALLDEMNKKGIHMDKFTFGI 549
           V+KA   MQ+++E+GFA SPL YNIM++LY ++G++++LD+LL EM ++G++ D+FT+ I
Sbjct: 146 VDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSI 205

Query: 550 RLNAYVDTSEIDDMEKLLLRMEVNPMVTMDWNCYTIAANGYTKAGLIDKALATLKKSEAL 729
           R++AY   S+   +EK++ +ME NP + +DWNCY IAAN Y K GLIDK+++ LKKSE L
Sbjct: 206 RISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKSEGL 265

Query: 730 IPGTKRR-FAYD 762
           +   K++ FA++
Sbjct: 266 LANVKKKGFAFN 277


>ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528792|gb|EEF30799.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 300

 Score =  286 bits (731), Expect = 4e-75
 Identities = 140/248 (56%), Positives = 185/248 (74%)
 Frame = +1

Query: 25  LYSRISPIGDPRVSVVPVLQQWIQEGKTVTGDEIKSMIKQLRIFRRFKHALEISQWMSDR 204
           LY RISP+GDP+VS+VP+L QWI+EGK+V  D+++  IK+LR  +R+ HALEIS WMSD+
Sbjct: 51  LYRRISPVGDPKVSIVPILDQWIEEGKSVNKDQLQVFIKELRYCKRYTHALEISMWMSDK 110

Query: 205 RSIVLSPGDIATRLGLISKVHGIEQAEKYFDNIPKQSKIFPVYFSLLNCYGQSKSVEKAE 384
           R   L+  D+A RL L+SKV GIEQAEKYF+N+P++ K+  VY +LLNCY  +KSV+KAE
Sbjct: 111 RYFALTSRDVAIRLDLMSKVLGIEQAEKYFENVPQKLKVLEVYNALLNCYAYAKSVDKAE 170

Query: 385 LLMQQVRELGFAISPLAYNIMLSLYSKVGQYQKLDALLDEMNKKGIHMDKFTFGIRLNAY 564
            +MQ +R+LGFA   L YN+ML+L+ + G ++KL+AL+ EM + GI  D+FT GI+L+AY
Sbjct: 171 AVMQNMRDLGFAGKTLTYNVMLNLHYQTGNFKKLEALMLEMEENGIAYDRFTLGIQLSAY 230

Query: 565 VDTSEIDDMEKLLLRMEVNPMVTMDWNCYTIAANGYTKAGLIDKALATLKKSEALIPGTK 744
               +I  MEK++ RME +  V  DW  Y I ANGY KAGL+DKAL  LKKSE LI G K
Sbjct: 231 AAICDIQRMEKIMSRMESDANVVTDWCNYAIVANGYRKAGLMDKALEMLKKSEGLITGKK 290

Query: 745 RRFAYDFL 768
           R  AY+FL
Sbjct: 291 RSSAYNFL 298


>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  284 bits (726), Expect = 2e-74
 Identities = 135/250 (54%), Positives = 189/250 (75%)
 Frame = +1

Query: 19  DTLYSRISPIGDPRVSVVPVLQQWIQEGKTVTGDEIKSMIKQLRIFRRFKHALEISQWMS 198
           DTLY RIS  G P +S+VP+L++W++EG  V   E++  +KQLR +RRF HAL++S+WM+
Sbjct: 39  DTLYGRISKAGKPSISIVPILEKWLEEGNDVKKPELQKFVKQLRKYRRFTHALQVSEWMT 98

Query: 199 DRRSIVLSPGDIATRLGLISKVHGIEQAEKYFDNIPKQSKIFPVYFSLLNCYGQSKSVEK 378
           D++   L PGD+A RL LISKVHG+ +AE+YF++IP  S+   VY +LLNC   SK + K
Sbjct: 99  DKKGCSLLPGDVAVRLDLISKVHGLVKAEEYFNSIPDTSRDRQVYGALLNCCAHSKLLGK 158

Query: 379 AELLMQQVRELGFAISPLAYNIMLSLYSKVGQYQKLDALLDEMNKKGIHMDKFTFGIRLN 558
           AE  MQ++++LGF  + L+YN+MLSLYS +G Y+KLD L+ EM + GI  D+ T+ IRLN
Sbjct: 159 AEATMQKMKDLGFVKNSLSYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRLN 218

Query: 559 AYVDTSEIDDMEKLLLRMEVNPMVTMDWNCYTIAANGYTKAGLIDKALATLKKSEALIPG 738
           A V++S+I+ MEKLL++MEV+P +++ ++ Y IAANGY KAGL+DK L  LK+SE LI G
Sbjct: 219 ACVNSSDIEGMEKLLMKMEVDPNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLISG 278

Query: 739 TKRRFAYDFL 768
             RRFAY+FL
Sbjct: 279 NTRRFAYEFL 288


>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score =  281 bits (718), Expect = 1e-73
 Identities = 133/256 (51%), Positives = 188/256 (73%)
 Frame = +1

Query: 1   TPKVKRDTLYSRISPIGDPRVSVVPVLQQWIQEGKTVTGDEIKSMIKQLRIFRRFKHALE 180
           T    +++L SRISP  D RVS+VP L+QW +EG+++   ++  +I++LR F+R+ HALE
Sbjct: 29  TSNAPKESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALE 88

Query: 181 ISQWMSDRRSIVLSPGDIATRLGLISKVHGIEQAEKYFDNIPKQSKIFPVYFSLLNCYGQ 360
           I +W+ D+    +SPGD+A +L LISKVHG+EQAEKYF+  P   + F VY +LLNCY Q
Sbjct: 89  IYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQ 148

Query: 361 SKSVEKAELLMQQVRELGFAISPLAYNIMLSLYSKVGQYQKLDALLDEMNKKGIHMDKFT 540
            KS+EKAE +MQ++R++GF +  L+YN+ML LYS++G+++KLD L+ EM + GI +D FT
Sbjct: 149 KKSLEKAEAIMQEMRDMGF-VKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFT 207

Query: 541 FGIRLNAYVDTSEIDDMEKLLLRMEVNPMVTMDWNCYTIAANGYTKAGLIDKALATLKKS 720
           + IRLNAY  TS+++ MEKLL+++E +P V  DWN Y +AANGY KA L +KA+  LKKS
Sbjct: 208 YCIRLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKS 267

Query: 721 EALIPGTKRRFAYDFL 768
           E  I G  RRF Y+ L
Sbjct: 268 EQFISGRSRRFGYEIL 283


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score =  281 bits (718), Expect = 1e-73
 Identities = 133/256 (51%), Positives = 188/256 (73%)
 Frame = +1

Query: 1   TPKVKRDTLYSRISPIGDPRVSVVPVLQQWIQEGKTVTGDEIKSMIKQLRIFRRFKHALE 180
           T    +++L SRISP  D RVS+VP L+QW +EG+++   ++  +I++LR F+R+ HALE
Sbjct: 29  TSNAPKESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALE 88

Query: 181 ISQWMSDRRSIVLSPGDIATRLGLISKVHGIEQAEKYFDNIPKQSKIFPVYFSLLNCYGQ 360
           I +W+ D+    +SPGD+A +L LISKVHG+EQAEKYF+  P   + F VY +LLNCY Q
Sbjct: 89  IYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQ 148

Query: 361 SKSVEKAELLMQQVRELGFAISPLAYNIMLSLYSKVGQYQKLDALLDEMNKKGIHMDKFT 540
            KS+EKAE +MQ++R++GF +  L+YN+ML LYS++G+++KLD L+ EM + GI +D FT
Sbjct: 149 KKSLEKAEAIMQEMRDMGF-VKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFT 207

Query: 541 FGIRLNAYVDTSEIDDMEKLLLRMEVNPMVTMDWNCYTIAANGYTKAGLIDKALATLKKS 720
           + IRLNAY  TS+++ MEKLL+++E +P V  DWN Y +AANGY KA L +KA+  LKKS
Sbjct: 208 YCIRLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKS 267

Query: 721 EALIPGTKRRFAYDFL 768
           E  I G  RRF Y+ L
Sbjct: 268 EQFISGRSRRFGYEIL 283