BLASTX nr result
ID: Cimicifuga21_contig00015218
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00015218
(353 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_11037278.1| hypothetical protein HMPREF9241_00001 [Actino... 121 5e-26
ref|YP_002731697.1| hypothetical protein PERMA_1937 [Persephonel... 82 5e-20
ref|YP_002730924.1| hypothetical protein PERMA_1141 [Persephonel... 80 2e-19
ref|ZP_07714070.1| conserved hypothetical protein [Corynebacteri... 100 2e-19
ref|YP_003600535.1| hypothetical protein LCRIS_00063 [Lactobacil... 85 2e-18
>ref|ZP_11037278.1| hypothetical protein HMPREF9241_00001 [Actinomyces turicensis
ACS-279-V-Col4] gi|405980290|ref|ZP_11038629.1|
hypothetical protein HMPREF9241_01352 [Actinomyces
turicensis ACS-279-V-Col4]
gi|405980542|ref|ZP_11038880.1| hypothetical protein
HMPREF9241_01603 [Actinomyces turicensis ACS-279-V-Col4]
gi|404389952|gb|EJZ85023.1| hypothetical protein
HMPREF9241_01603 [Actinomyces turicensis ACS-279-V-Col4]
gi|404390283|gb|EJZ85352.1| hypothetical protein
HMPREF9241_01352 [Actinomyces turicensis ACS-279-V-Col4]
gi|404393425|gb|EJZ88479.1| hypothetical protein
HMPREF9241_00001 [Actinomyces turicensis ACS-279-V-Col4]
Length = 92
Score = 121 bits (304), Expect = 5e-26
Identities = 65/89 (73%), Positives = 72/89 (80%)
Frame = +2
Query: 86 LWRREPT*VEN*GDELWVGVKGQSNSVIAGSPRNAFRCSVAWFLLEVEHWMV*GAYRLTE 265
+WR EPT VEN GDELWVGVKGQSNSVIAGSPRNAFRCSV L+EVE A +T+
Sbjct: 1 MWRTEPTRVENLGDELWVGVKGQSNSVIAGSPRNAFRCSVVCCLVEVELLDGRWALWVTD 60
Query: 266 ISQTPNAGKCSVAVRRRGISFVVERETAQ 352
+SQTPNA + S+AVR RGISFVVERETAQ
Sbjct: 61 VSQTPNAIRLSMAVRLRGISFVVERETAQ 89
>ref|YP_002731697.1| hypothetical protein PERMA_1937 [Persephonella marina EX-H1]
gi|225645098|gb|ACO03284.1| conserved hypothetical
protein [Persephonella marina EX-H1]
Length = 159
Score = 81.6 bits (200), Expect(2) = 5e-20
Identities = 41/71 (57%), Positives = 47/71 (66%)
Frame = -1
Query: 236 SSALPPTRTTQRCT*MHFGENQLSRSLIGLSPLPTTHPLSFQPKWVRASTKSYLCFTLAM 57
S +LPP R +RCT MHFGEN+LSR+ IG SPL T HP Q + VRAS + Y FTL M
Sbjct: 47 SVSLPPGRNERRCTSMHFGENELSRNAIGFSPLSTPHPTVLQHRLVRASRRCYPSFTLGM 106
Query: 56 GRSPRFGSRTC 24
RS RF S C
Sbjct: 107 DRSFRFASAAC 117
Score = 40.8 bits (94), Expect(2) = 5e-20
Identities = 20/41 (48%), Positives = 22/41 (53%)
Frame = -2
Query: 352 LGCFPLDDEAYPPPSHCHATLASIRSLADFGKPISPLDHPV 230
LGCFPL A P +HC +T IRSL FG P L V
Sbjct: 8 LGCFPLVHGADPSWTHCRSTFPGIRSLVGFGTPFGALAQSV 48
>ref|YP_002730924.1| hypothetical protein PERMA_1141 [Persephonella marina EX-H1]
gi|225645458|gb|ACO03644.1| conserved hypothetical
protein [Persephonella marina EX-H1]
Length = 159
Score = 80.1 bits (196), Expect(2) = 2e-19
Identities = 40/71 (56%), Positives = 47/71 (66%)
Frame = -1
Query: 236 SSALPPTRTTQRCT*MHFGENQLSRSLIGLSPLPTTHPLSFQPKWVRASTKSYLCFTLAM 57
S +LPP R +RCT MHFGEN+LS++ IG SPL T HP Q + VRAS + Y FTL M
Sbjct: 47 SVSLPPGRNERRCTSMHFGENELSQNAIGFSPLSTPHPTVLQHRLVRASRRCYPSFTLGM 106
Query: 56 GRSPRFGSRTC 24
RS RF S C
Sbjct: 107 DRSFRFASAAC 117
Score = 40.8 bits (94), Expect(2) = 2e-19
Identities = 20/41 (48%), Positives = 22/41 (53%)
Frame = -2
Query: 352 LGCFPLDDEAYPPPSHCHATLASIRSLADFGKPISPLDHPV 230
LGCFPL A P +HC +T IRSL FG P L V
Sbjct: 8 LGCFPLVHGADPSWTHCRSTFPGIRSLVGFGTPFGALAQSV 48
>ref|ZP_07714070.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035] gi|311740310|ref|ZP_07714141.1| conserved
hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035] gi|311304693|gb|EFQ80765.1| conserved
hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035] gi|311304793|gb|EFQ80864.1| conserved
hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 74
Score = 100 bits (248), Expect = 2e-19
Identities = 45/52 (86%), Positives = 48/52 (92%)
Frame = -3
Query: 210 HATLHLNAFRGEPAITEFDWPFTPTHNSSPQFST*VGSRLHKVLPLLHTGHG 55
+ TLHLNAFRGEPAITEFDWPFTPTH+SSPQFST VGSRLH +L LLHTGHG
Sbjct: 23 NTTLHLNAFRGEPAITEFDWPFTPTHSSSPQFSTYVGSRLHNLLQLLHTGHG 74
>ref|YP_003600535.1| hypothetical protein LCRIS_00063 [Lactobacillus crispatus ST1]
gi|295692304|ref|YP_003600914.1| hypothetical protein
LCRIS_00442 [Lactobacillus crispatus ST1]
gi|295692317|ref|YP_003600927.1| hypothetical protein
LCRIS_00455 [Lactobacillus crispatus ST1]
gi|295693512|ref|YP_003602122.1| hypothetical protein
LCRIS_01650 [Lactobacillus crispatus ST1]
gi|295030031|emb|CBL49510.1| conserved protein
[Lactobacillus crispatus ST1]
gi|295030410|emb|CBL49889.1| conserved protein
[Lactobacillus crispatus ST1]
gi|295030423|emb|CBL49902.1| conserved protein
[Lactobacillus crispatus ST1]
gi|295031618|emb|CBL51097.1| conserved protein
[Lactobacillus crispatus ST1]
Length = 156
Score = 85.1 bits (209), Expect(2) = 2e-18
Identities = 43/84 (51%), Positives = 49/84 (58%)
Frame = -2
Query: 256 PISPLDHPVLYLQQEPRNAAPKCISGRTSYHGV*LAFHPYPQLIPSVFNLSGFAPPQSLT 77
P PL LYL A+PK IS RTSY V L FH YPQLIP++FNL GF PP T
Sbjct: 35 PDGPLVQTELYLHYPLHEASPKAISERTSYLQVRLEFHRYPQLIPAIFNLRGFGPPVRFT 94
Query: 76 SASHWPWVDHPASGPGHATKHPMR 5
+ S W WV H SG H T P++
Sbjct: 95 TPSAWSWVGHLVSGLRHLTFRPIK 118
Score = 32.0 bits (71), Expect(2) = 2e-18
Identities = 19/36 (52%), Positives = 21/36 (58%)
Frame = -3
Query: 351 WAVSLSTTKLIPRRLTATLHLPAFGVWLISVSR*AP 244
WAVSLSTT LI R LT F V+L SV+ P
Sbjct: 3 WAVSLSTTDLITRSLTPVYGYLEFVVYLDSVTPDGP 38