BLASTX nr result

ID: Cimicifuga21_contig00015106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015106
         (1326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310331.1| predicted protein [Populus trichocarpa] gi|2...   447   e-123
ref|XP_002525297.1| GTP-binding protein engB, putative [Ricinus ...   443   e-122
ref|XP_002878640.1| EMB2001 [Arabidopsis lyrata subsp. lyrata] g...   418   e-114
ref|XP_003541533.1| PREDICTED: GTP-binding protein At2g22870-lik...   417   e-114
ref|NP_565543.1| GTP-binding protein [Arabidopsis thaliana] gi|2...   415   e-113

>ref|XP_002310331.1| predicted protein [Populus trichocarpa] gi|222853234|gb|EEE90781.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  447 bits (1151), Expect = e-123
 Identities = 214/271 (78%), Positives = 239/271 (88%)
 Frame = +2

Query: 176 FSQTIHQTPSTRHNISASKTRTAKPASPSDKAKFVKTALFVPPGVDPEQVTEEMILPGSN 355
           F+ +  + P+   +   S ++T+KP   SD A+FV+T LFVPPGVDP++VTEE+ILPGSN
Sbjct: 31  FNYSTREPPNRNPSGHVSASKTSKPPPLSDVARFVRTVLFVPPGVDPDKVTEEIILPGSN 90

Query: 356 IVLGPYAGHSQIKQVEFIKSSHRPKDCPTNDLPEFAILGRSNVGKSSLINALVRKKEVAL 535
           IV+GPYAGHSQIK+VEF+KSS R KDCP +D PEFAILGRSNVGKSSLIN L RKKEVAL
Sbjct: 91  IVVGPYAGHSQIKEVEFVKSSGRAKDCPRDDRPEFAILGRSNVGKSSLINVLARKKEVAL 150

Query: 536 TSKKPGKTQLINHFLVNKSWYIVDLPGYGFANAPESARMDWSSFTKGYFLNRETLVGVLL 715
           TSKKPGKTQLINHFLVNKSWY+VDLPGYGFA AP+SARMDWSSFTKGYFLNRETLV VLL
Sbjct: 151 TSKKPGKTQLINHFLVNKSWYLVDLPGYGFAKAPDSARMDWSSFTKGYFLNRETLVAVLL 210

Query: 716 LVDASIPPRKIDLDCANWLGRNNIPMTFVFTKCDKSKGCKGNRPDENIKEFQELIKENYR 895
           L+DAS+PP+KIDLDCANWLGRNNIPMT VFTKCDK KG K  RPDENIK FQEL+++NYR
Sbjct: 211 LIDASVPPQKIDLDCANWLGRNNIPMTLVFTKCDKMKGGKRTRPDENIKNFQELMRQNYR 270

Query: 896 EPPPWIMTSSVTGLGRDELLLHMSQLRNYWD 988
           E P WIMTSSVTGLGRDELLLHMSQLRNYWD
Sbjct: 271 EHPAWIMTSSVTGLGRDELLLHMSQLRNYWD 301


>ref|XP_002525297.1| GTP-binding protein engB, putative [Ricinus communis]
           gi|223535455|gb|EEF37125.1| GTP-binding protein engB,
           putative [Ricinus communis]
          Length = 296

 Score =  443 bits (1139), Expect = e-122
 Identities = 216/279 (77%), Positives = 242/279 (86%), Gaps = 2/279 (0%)
 Frame = +2

Query: 158 LSFRQPFSQTI--HQTPSTRHNISASKTRTAKPASPSDKAKFVKTALFVPPGVDPEQVTE 331
           L F +  S TI  H +  +  +   S ++TAKP S +D A+F +T LFVPPGVDP++VTE
Sbjct: 18  LPFNKSLSFTIAFHFSAQSSPHPKFSASKTAKP-STADSARFARTVLFVPPGVDPDEVTE 76

Query: 332 EMILPGSNIVLGPYAGHSQIKQVEFIKSSHRPKDCPTNDLPEFAILGRSNVGKSSLINAL 511
            M+LPGSNIV+GPYAGHSQIK+VEF+KSS R +DCP  D PEFAILGRSNVGKSSLINAL
Sbjct: 77  NMVLPGSNIVVGPYAGHSQIKEVEFVKSSSRARDCPREDRPEFAILGRSNVGKSSLINAL 136

Query: 512 VRKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFANAPESARMDWSSFTKGYFLNR 691
           VRKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFA AP SA+ DWSSFTKGYFLNR
Sbjct: 137 VRKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPASAQTDWSSFTKGYFLNR 196

Query: 692 ETLVGVLLLVDASIPPRKIDLDCANWLGRNNIPMTFVFTKCDKSKGCKGNRPDENIKEFQ 871
           ETLV VLLL+DAS+PP+KIDLDCA+WLGRNNIP+TFVFTKCDK KG K  RPDENI+ FQ
Sbjct: 197 ETLVAVLLLIDASVPPQKIDLDCADWLGRNNIPLTFVFTKCDKMKGGKSTRPDENIRNFQ 256

Query: 872 ELIKENYREPPPWIMTSSVTGLGRDELLLHMSQLRNYWD 988
           ELI++NY+E PPWIMTSSVTGLGRDELLLHMSQLRNYWD
Sbjct: 257 ELIRQNYQEHPPWIMTSSVTGLGRDELLLHMSQLRNYWD 295


>ref|XP_002878640.1| EMB2001 [Arabidopsis lyrata subsp. lyrata]
           gi|297324479|gb|EFH54899.1| EMB2001 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 300

 Score =  418 bits (1075), Expect = e-114
 Identities = 198/276 (71%), Positives = 236/276 (85%)
 Frame = +2

Query: 161 SFRQPFSQTIHQTPSTRHNISASKTRTAKPASPSDKAKFVKTALFVPPGVDPEQVTEEMI 340
           SFR P   +I +  ++ +N + +  R     S SD AKF K+ LF+PPGV+ E++T++M+
Sbjct: 29  SFRNPNFISIPKISASSNNPATTTNR-----SISDAAKFAKSVLFIPPGVEIEELTDDMV 83

Query: 341 LPGSNIVLGPYAGHSQIKQVEFIKSSHRPKDCPTNDLPEFAILGRSNVGKSSLINALVRK 520
           LPGSNIV+GP+AGHSQIK+VEF+KSS R +DCP +D PE AILGRSNVGKSSLIN LVRK
Sbjct: 84  LPGSNIVIGPFAGHSQIKEVEFVKSSARARDCPKDDRPEIAILGRSNVGKSSLINCLVRK 143

Query: 521 KEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFANAPESARMDWSSFTKGYFLNRETL 700
           KEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFA   ++A+ DWS+FTKGYFLNR+TL
Sbjct: 144 KEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRDTL 203

Query: 701 VGVLLLVDASIPPRKIDLDCANWLGRNNIPMTFVFTKCDKSKGCKGNRPDENIKEFQELI 880
           V +LLL+DAS+PP+KIDLDCANWLGRNN+PMTFVFTKCDK K  KG RPDENIK FQ++I
Sbjct: 204 VCILLLIDASVPPQKIDLDCANWLGRNNVPMTFVFTKCDKMKAAKGKRPDENIKAFQQII 263

Query: 881 KENYREPPPWIMTSSVTGLGRDELLLHMSQLRNYWD 988
           +EN++  PPWI+TSSV+GLGRDELLLHMSQLRNYWD
Sbjct: 264 RENFKVHPPWILTSSVSGLGRDELLLHMSQLRNYWD 299


>ref|XP_003541533.1| PREDICTED: GTP-binding protein At2g22870-like [Glycine max]
          Length = 305

 Score =  417 bits (1073), Expect = e-114
 Identities = 197/276 (71%), Positives = 232/276 (84%)
 Frame = +2

Query: 161 SFRQPFSQTIHQTPSTRHNISASKTRTAKPASPSDKAKFVKTALFVPPGVDPEQVTEEMI 340
           SFR P S          H+ +ASKT T  P   S      ++ LF+PPG++P++V +  +
Sbjct: 43  SFRHPLS----------HSSNASKTPTTNPLPSSS----FESQLFIPPGIEPDEVDDSTV 88

Query: 341 LPGSNIVLGPYAGHSQIKQVEFIKSSHRPKDCPTNDLPEFAILGRSNVGKSSLINALVRK 520
           LPGSNI +GPYAG S+IK V+F+KSS R +DCP +DLPEFA+LGRSNVGKSSLIN+LVRK
Sbjct: 89  LPGSNIAVGPYAGDSRIKDVQFVKSSARARDCPKDDLPEFAVLGRSNVGKSSLINSLVRK 148

Query: 521 KEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFANAPESARMDWSSFTKGYFLNRETL 700
           KE+ALTSKKPGKTQLINHFLVNKSWY+VDLPGYGFA APE+A+ DWSSFTKGYFLNR TL
Sbjct: 149 KEIALTSKKPGKTQLINHFLVNKSWYLVDLPGYGFAKAPEAAKTDWSSFTKGYFLNRSTL 208

Query: 701 VGVLLLVDASIPPRKIDLDCANWLGRNNIPMTFVFTKCDKSKGCKGNRPDENIKEFQELI 880
           V VLLL+DAS+PP+K+DLDCANWLGRNNIP+TFVFTKCDK K  KG RPDENI++FQELI
Sbjct: 209 VAVLLLIDASVPPQKVDLDCANWLGRNNIPITFVFTKCDKMKVAKGKRPDENIRDFQELI 268

Query: 881 KENYREPPPWIMTSSVTGLGRDELLLHMSQLRNYWD 988
           ++NY++ PPWIMTSSVTG+GRDELLLHMSQLRNYWD
Sbjct: 269 RQNYKQHPPWIMTSSVTGMGRDELLLHMSQLRNYWD 304


>ref|NP_565543.1| GTP-binding protein [Arabidopsis thaliana]
           gi|21903474|sp|O81004.2|Y2287_ARATH RecName:
           Full=GTP-binding protein At2g22870; AltName:
           Full=Protein EMBRYO DEFECTIVE 2001
           gi|20197273|gb|AAC32434.2| putative nucleotide-binding
           protein [Arabidopsis thaliana]
           gi|21592880|gb|AAM64830.1| putative nucleotide-binding
           protein [Arabidopsis thaliana]
           gi|52354269|gb|AAU44455.1| hypothetical protein
           AT2G22870 [Arabidopsis thaliana]
           gi|55740571|gb|AAV63878.1| hypothetical protein
           At2g22870 [Arabidopsis thaliana]
           gi|330252273|gb|AEC07367.1| GTP-binding protein
           [Arabidopsis thaliana]
          Length = 300

 Score =  415 bits (1067), Expect = e-113
 Identities = 197/276 (71%), Positives = 235/276 (85%)
 Frame = +2

Query: 161 SFRQPFSQTIHQTPSTRHNISASKTRTAKPASPSDKAKFVKTALFVPPGVDPEQVTEEMI 340
           SFR P   +I +  ++ +N + +  R     S SD  KF K+ LF+PPGV+ E++T++M+
Sbjct: 29  SFRNPNFISIPKISASTNNPTTTTNR-----SISDATKFAKSVLFIPPGVEIEELTDDMV 83

Query: 341 LPGSNIVLGPYAGHSQIKQVEFIKSSHRPKDCPTNDLPEFAILGRSNVGKSSLINALVRK 520
           LPGSNIV+GP+AGHSQIK+VEF+KSS R +DCP +D PE AILGRSNVGKSSLIN LVRK
Sbjct: 84  LPGSNIVIGPFAGHSQIKEVEFVKSSARARDCPKDDRPEIAILGRSNVGKSSLINCLVRK 143

Query: 521 KEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFANAPESARMDWSSFTKGYFLNRETL 700
           KEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFA   ++A+ DWS+FTKGYFLNR++L
Sbjct: 144 KEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRDSL 203

Query: 701 VGVLLLVDASIPPRKIDLDCANWLGRNNIPMTFVFTKCDKSKGCKGNRPDENIKEFQELI 880
           V VLLL+DAS+PP+KIDLDCANWLGRNN+PMTFVFTKCDK K  KG RPDENIK FQ++I
Sbjct: 204 VCVLLLIDASVPPQKIDLDCANWLGRNNVPMTFVFTKCDKMKATKGKRPDENIKAFQQII 263

Query: 881 KENYREPPPWIMTSSVTGLGRDELLLHMSQLRNYWD 988
           +EN++  PPWI+TSSV+GLGRDELLLHMSQLRNYWD
Sbjct: 264 RENFKVHPPWILTSSVSGLGRDELLLHMSQLRNYWD 299


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