BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015088
         (1996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141564.1| PREDICTED: threonylcarbamoyladenosine tRNA m...   810   0.0  
ref|XP_002521816.1| radical sam protein, putative [Ricinus commu...   808   0.0  
ref|XP_004162857.1| PREDICTED: threonylcarbamoyladenosine tRNA m...   806   0.0  
ref|NP_565035.1| Methylthiotransferase [Arabidopsis thaliana] gi...   801   0.0  
ref|XP_002268292.2| PREDICTED: CDK5 regulatory subunit-associate...   801   0.0  

>ref|XP_004141564.1| PREDICTED: threonylcarbamoyladenosine tRNA methylthiotransferase-like
            [Cucumis sativus]
          Length = 635

 Score =  810 bits (2091), Expect = 0.0
 Identities = 422/632 (66%), Positives = 479/632 (75%), Gaps = 94/632 (14%)
 Frame = +1

Query: 79   MEDIEDLLVGSDGGEGGAPLGFRLPLTTVGLNPKRQNKRKQK----DAVATPSP------ 228
            MEDIEDLL+G   G GGAP G+RLP+T VG+ PK++N  K      D+   PSP      
Sbjct: 1    MEDIEDLLIG---GGGGAPPGYRLPITAVGVKPKKKNMFKSNASADDSSNEPSPIQNPLV 57

Query: 229  -QIPGTQIIYMKTFGCSHNQSDSEYMAGQLSAFGYALSDKPEEADLWLINTCTVKSPSQS 405
             +IPGTQ IY+KTFGCSHNQSDSEYMAGQLSAFGY LSD PE+ADLWLINTCTVKSPSQS
Sbjct: 58   PKIPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSDNPEDADLWLINTCTVKSPSQS 117

Query: 406  AMETLILKCRSAKKPLVVAGCVPQGSRNLKELEGVSIVGVQQIDRVVEVVEETLKGHEVR 585
            AM+TLI KC++AKKPLVVAGCVPQGSR+LKELEGVSIVGVQQIDRVVEVVEETLKGHEVR
Sbjct: 118  AMDTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVR 177

Query: 586  LLNRKTLPALNLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTIESLVERVRI 765
            LLNRKTLPAL+LPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYT++SLV RVR 
Sbjct: 178  LLNRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVRRVRS 237

Query: 766  VVADGVKEIWLSSEDTGAYGRDIGVNLPMLLNGIVEELPLDRSTMLRIGMTNPPFILEHL 945
            V+ +GV+EIWLSSEDTGAYGRDIGVNLP+LLN IV ELP D STMLRIGMTNPPFILEHL
Sbjct: 238  VINEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVSELPSDASTMLRIGMTNPPFILEHL 297

Query: 946  NEIAEVLRHPCVYSFLHVPVQSGSDSVLTGMNREYTVSQFRTVVDTLHRLVPGMQIATDI 1125
             EIA+VL HPCVYSFLHVPVQSGSD++L+ MNREYTVS+FRTVVDTL  LVPGMQIATDI
Sbjct: 298  KEIAKVLSHPCVYSFLHVPVQSGSDAILSAMNREYTVSEFRTVVDTLTELVPGMQIATDI 357

Query: 1126 ICGFPGETDEDFAQTVDLIKEYKFPHVHISQFYPRPGTPAARMKKVPSNVVKKRSRELTS 1305
            ICGFPGETDEDF +T++LIKEY  P VHISQFYPRPGTPAARMKKVPS +VKKRSRELTS
Sbjct: 358  ICGFPGETDEDFCETINLIKEYNLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTS 417

Query: 1306 VFESFTPYQGMEGQVERIWITEYATDGVHLVGHTKSYMQVLVVGPDSILGTSTQVRITSV 1485
            VFE+FTPY GMEG+VERIWITE A DG+HLVGHTK Y+QVLV+ P+++LGTS  V+ITS+
Sbjct: 418  VFEAFTPYNGMEGRVERIWITEIAADGIHLVGHTKGYIQVLVIAPETMLGTSATVKITSI 477

Query: 1486 GRWSVFGEVVKV------------------------DSNSSCSCSRE---AACG------ 1566
            GRWSVFGEV+++                        +++ +C+CS E    ACG      
Sbjct: 478  GRWSVFGEVIEIISTKHHKTTTLEDTLTQDKVSPCSNTHETCACSTEPESCACGLESCKG 537

Query: 1567 ----------------------------ALQREEIPAIPKTKET---------------- 1614
                                         L+R +   +PK +ET                
Sbjct: 538  AVAVGDEVNSSRNVPSPEEPKRKNLIEWVLRRRKSHVLPKREETENPIVTERKQTLAGGR 597

Query: 1615 ------VDWILLGGMLVSILTILYLLCYYNTT 1692
                  VD IL+GG+L+S  TI  LL +  +T
Sbjct: 598  LDEWGVVDKILVGGILISTFTIFGLLFHLGST 629


>ref|XP_002521816.1| radical sam protein, putative [Ricinus communis]
            gi|223539029|gb|EEF40626.1| radical sam protein, putative
            [Ricinus communis]
          Length = 630

 Score =  808 bits (2088), Expect = 0.0
 Identities = 411/530 (77%), Positives = 447/530 (84%), Gaps = 34/530 (6%)
 Frame = +1

Query: 79   MEDIEDLLVGSDGGEGGAPLGFRLPLTTVGLNPKR---QNKRKQKDAVATP----SPQIP 237
            MEDIEDLL+GS  G GGAP GFRLPL +VG+ PK+   +NK      ++      SP+IP
Sbjct: 1    MEDIEDLLIGSGSG-GGAPPGFRLPLNSVGVYPKKIIKKNKGYLNHGISLSQSLLSPKIP 59

Query: 238  GTQIIYMKTFGCSHNQSDSEYMAGQLSAFGYALSDKPEEADLWLINTCTVKSPSQSAMET 417
            GTQ IY+KTFGCSHNQSDSEYMAGQLS+FGYAL+D PE+ DLWLINTCTVKSPSQSAM+T
Sbjct: 60   GTQTIYIKTFGCSHNQSDSEYMAGQLSSFGYALTDIPEDGDLWLINTCTVKSPSQSAMDT 119

Query: 418  LILKCRSAKKPLVVAGCVPQGSRNLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNR 597
            +I K +SAKKPLVVAGCVPQGSRNLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL R
Sbjct: 120  IIAKGKSAKKPLVVAGCVPQGSRNLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLTR 179

Query: 598  KTLPALNLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTIESLVERVRIVVAD 777
            KTLPAL+LPKVRKNKF+EILPINVGCLGACTYCKTKHARGHLGSYTI+SLV RVR VV D
Sbjct: 180  KTLPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVRTVVGD 239

Query: 778  GVKEIWLSSEDTGAYGRDIGVNLPMLLNGIVEELPLDRSTMLRIGMTNPPFILEHLNEIA 957
            GVKEIWLSSEDTGAYGRDIGVNLP LLN IV ELP D STMLRIGMTNPPFILEHL EIA
Sbjct: 240  GVKEIWLSSEDTGAYGRDIGVNLPRLLNAIVSELPADASTMLRIGMTNPPFILEHLKEIA 299

Query: 958  EVLRHPCVYSFLHVPVQSGSDSVLTGMNREYTVSQFRTVVDTLHRLVPGMQIATDIICGF 1137
            EVLRHPCVYSFLHVPVQSGSD+VL  MNREYTVS FRTVVDTL  LVPGMQIATDIICGF
Sbjct: 300  EVLRHPCVYSFLHVPVQSGSDNVLNAMNREYTVSNFRTVVDTLTELVPGMQIATDIICGF 359

Query: 1138 PGETDEDFAQTVDLIKEYKFPHVHISQFYPRPGTPAARMKKVPSNVVKKRSRELTSVFES 1317
            PGETD+DFAQTV LI EYK P VHISQFYPRPGTPAARMKKVPSN+VKKRSRELT+VFE+
Sbjct: 360  PGETDDDFAQTVSLINEYKLPQVHISQFYPRPGTPAARMKKVPSNIVKKRSRELTAVFEA 419

Query: 1318 FTPYQGMEGQVERIWITEYATDGVHLVGHTKSYMQVLVVGPDSILGTSTQVRITSVGRWS 1497
            FTPY GMEG+VERIWITE ATDG+HLVGHTK Y+QVLV+ P+++LGTS  V+ITSVGRWS
Sbjct: 420  FTPYNGMEGRVERIWITEIATDGIHLVGHTKGYVQVLVIAPETMLGTSAIVKITSVGRWS 479

Query: 1498 VFGEVVKV------------------------DSNSSCSCSRE---AACG 1566
            VFGEV++                         D   +C+CS+E    ACG
Sbjct: 480  VFGEVIQTLNQTNRGVASAEKMPSGGKYSPCSDPCETCACSKEPESCACG 529


>ref|XP_004162857.1| PREDICTED: threonylcarbamoyladenosine tRNA methylthiotransferase-like
            [Cucumis sativus]
          Length = 635

 Score =  806 bits (2082), Expect = 0.0
 Identities = 422/632 (66%), Positives = 477/632 (75%), Gaps = 94/632 (14%)
 Frame = +1

Query: 79   MEDIEDLLVGSDGGEGGAPLGFRLPLTTVGLNPKRQNKRKQK----DAVATPSP------ 228
            MEDIEDLL+G   G GGAP G+RLPLT VG+ PK++N  K      D+   PSP      
Sbjct: 1    MEDIEDLLIG---GGGGAPPGYRLPLTAVGVKPKKKNMFKSNASADDSSNEPSPIQNPLV 57

Query: 229  -QIPGTQIIYMKTFGCSHNQSDSEYMAGQLSAFGYALSDKPEEADLWLINTCTVKSPSQS 405
             +IPGTQ IY+KTFGCSHNQSDSEYMAGQLSAFGY LSD PE+ADLWLINTCTVKSPSQS
Sbjct: 58   PKIPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSDNPEDADLWLINTCTVKSPSQS 117

Query: 406  AMETLILKCRSAKKPLVVAGCVPQGSRNLKELEGVSIVGVQQIDRVVEVVEETLKGHEVR 585
            AM+TLI KC++AKKPLVVAGCVPQGSR+LKELEGVSIVGVQQIDRVVEVVEETLKGHEVR
Sbjct: 118  AMDTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVR 177

Query: 586  LLNRKTLPALNLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTIESLVERVRI 765
            LLNRKTLPAL+LPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYT++SLV RVR 
Sbjct: 178  LLNRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTLDSLVRRVRS 237

Query: 766  VVADGVKEIWLSSEDTGAYGRDIGVNLPMLLNGIVEELPLDRSTMLRIGMTNPPFILEHL 945
            V+ +GV+EIWLSSEDTGAYGRDIGV LP+LLN IV ELP D STMLRIGMTNPPFILEHL
Sbjct: 238  VINEGVREIWLSSEDTGAYGRDIGVTLPILLNAIVSELPSDASTMLRIGMTNPPFILEHL 297

Query: 946  NEIAEVLRHPCVYSFLHVPVQSGSDSVLTGMNREYTVSQFRTVVDTLHRLVPGMQIATDI 1125
             EIA+VL HPCVYSFLHVPVQSGSD++L+ MNREYTVS+FRTVVDTL  LVPGMQIATDI
Sbjct: 298  KEIAKVLSHPCVYSFLHVPVQSGSDAILSAMNREYTVSEFRTVVDTLTELVPGMQIATDI 357

Query: 1126 ICGFPGETDEDFAQTVDLIKEYKFPHVHISQFYPRPGTPAARMKKVPSNVVKKRSRELTS 1305
            ICGFPGETDEDF +T++LIKEY  P VHISQFYPRPGTPAARMKKVPS +VKKRSRELTS
Sbjct: 358  ICGFPGETDEDFCETINLIKEYNLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTS 417

Query: 1306 VFESFTPYQGMEGQVERIWITEYATDGVHLVGHTKSYMQVLVVGPDSILGTSTQVRITSV 1485
            VFE+FTPY GMEG+VERIWITE A DG+HLVGHTK Y+QVLV+  +++LGTS  V+ITS+
Sbjct: 418  VFEAFTPYNGMEGRVERIWITEIAADGIHLVGHTKGYIQVLVIASETMLGTSATVKITSI 477

Query: 1486 GRWSVFGEVVKV------------------------DSNSSCSCSRE---AACG------ 1566
            GRWSVFGEV+K+                        +++ +C+CS E    ACG      
Sbjct: 478  GRWSVFGEVIKIISTKHHKTTTLEDTLTQDKVSPCSNTHETCACSTEPESCACGLESCKG 537

Query: 1567 ----------------------------ALQREEIPAIPKTKET---------------- 1614
                                         L+R +   +PK +ET                
Sbjct: 538  AVAVGDKVNSSRNIPSPEEPKRKNLIEWVLRRRKSHVLPKREETENPIVTERKQTLAGGR 597

Query: 1615 ------VDWILLGGMLVSILTILYLLCYYNTT 1692
                  VD IL+GG+L+S  TI  LL +  +T
Sbjct: 598  LDEWGVVDKILVGGILISTFTIFGLLFHLGST 629


>ref|NP_565035.1| Methylthiotransferase [Arabidopsis thaliana]
            gi|12322201|gb|AAG51137.1|AC069273_8 unknown protein
            [Arabidopsis thaliana]
            gi|14194137|gb|AAK56263.1|AF367274_1 At1g72090/F28P5_4
            [Arabidopsis thaliana] gi|27363418|gb|AAO11628.1|
            At1g72090/F28P5_4 [Arabidopsis thaliana]
            gi|332197151|gb|AEE35272.1| Methylthiotransferase
            [Arabidopsis thaliana]
          Length = 601

 Score =  801 bits (2069), Expect = 0.0
 Identities = 395/497 (79%), Positives = 439/497 (88%), Gaps = 11/497 (2%)
 Frame = +1

Query: 79   MEDIEDLLVGSDGGEGGAPLGFRLPLTTVGLNPKRQNKRK-----------QKDAVATPS 225
            MEDIEDLL G   G GGAP GFRLPL  VG+NPK    ++            +D++A PS
Sbjct: 1    MEDIEDLLAG---GVGGAPPGFRLPLNAVGINPKTNKSKRISSKPDQITASNRDSLAPPS 57

Query: 226  PQIPGTQIIYMKTFGCSHNQSDSEYMAGQLSAFGYALSDKPEEADLWLINTCTVKSPSQS 405
             +IPGTQ IY+KTFGCSHNQSDSEYMAGQLSAFGYAL++ PEEADLWLINTCTVKSPSQS
Sbjct: 58   MKIPGTQTIYIKTFGCSHNQSDSEYMAGQLSAFGYALTEVPEEADLWLINTCTVKSPSQS 117

Query: 406  AMETLILKCRSAKKPLVVAGCVPQGSRNLKELEGVSIVGVQQIDRVVEVVEETLKGHEVR 585
            AM TLI + RS KKPLV+AGCVPQGSR+LKELEGVS+VGVQQIDRVVE+VEETLKGHEVR
Sbjct: 118  AMSTLITRGRSGKKPLVIAGCVPQGSRDLKELEGVSVVGVQQIDRVVEIVEETLKGHEVR 177

Query: 586  LLNRKTLPALNLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTIESLVERVRI 765
            LL RKTLPAL+LPKVR+N FIEILPINVGCLGACTYCKTKHARGHLGSYT++SLVERVR 
Sbjct: 178  LLTRKTLPALDLPKVRRNNFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVERVRT 237

Query: 766  VVADGVKEIWLSSEDTGAYGRDIGVNLPMLLNGIVEELPLDRSTMLRIGMTNPPFILEHL 945
            V+++GVKEIWLSSEDTGAYGRDIGVNLP+LLN IV+ELP D+STMLRIGMTNPPFILEHL
Sbjct: 238  VISEGVKEIWLSSEDTGAYGRDIGVNLPILLNAIVKELPSDQSTMLRIGMTNPPFILEHL 297

Query: 946  NEIAEVLRHPCVYSFLHVPVQSGSDSVLTGMNREYTVSQFRTVVDTLHRLVPGMQIATDI 1125
             EIA VLRHPCVY+FLHVPVQSGSDSVLT MNREYT S+FRTVVDTL  LVPGMQIATDI
Sbjct: 298  KEIAAVLRHPCVYTFLHVPVQSGSDSVLTAMNREYTASEFRTVVDTLTELVPGMQIATDI 357

Query: 1126 ICGFPGETDEDFAQTVDLIKEYKFPHVHISQFYPRPGTPAARMKKVPSNVVKKRSRELTS 1305
            ICGFPGETDEDF+QTV+LIK+YKFP VHISQFYPRPGTPAA+MKKV S +VK+RSRELTS
Sbjct: 358  ICGFPGETDEDFSQTVELIKDYKFPQVHISQFYPRPGTPAAKMKKVQSKIVKQRSRELTS 417

Query: 1306 VFESFTPYQGMEGQVERIWITEYATDGVHLVGHTKSYMQVLVVGPDSILGTSTQVRITSV 1485
            VFE+F PY GME + ERIWITE ATDG+HLVGHTK Y+QVLV GP+S+LGTS   RITSV
Sbjct: 418  VFEAFAPYTGMECREERIWITEVATDGIHLVGHTKGYVQVLVTGPESMLGTSAMARITSV 477

Query: 1486 GRWSVFGEVVKVDSNSS 1536
            GRWSVFGEV++  S+++
Sbjct: 478  GRWSVFGEVIETFSSAN 494


>ref|XP_002268292.2| PREDICTED: CDK5 regulatory subunit-associated protein 1-like 1-like
            [Vitis vinifera]
          Length = 622

 Score =  801 bits (2069), Expect = 0.0
 Identities = 413/558 (74%), Positives = 460/558 (82%), Gaps = 41/558 (7%)
 Frame = +1

Query: 79   MEDIEDLLVGSDGGEGGAPLGFRLPLTTVGLNPKR-QNKRKQKDAVATPSPQIPGTQIIY 255
            MEDIEDLLVG+  G GGAP GFRLPL +VG  PK+ +NK   +         IPGTQ IY
Sbjct: 1    MEDIEDLLVGN--GVGGAPPGFRLPLASVGFKPKQNKNKPNLEKKSHIQDYIIPGTQTIY 58

Query: 256  MKTFGCSHNQSDSEYMAGQLSAFGYALSDKPEEADLWLINTCTVKSPSQSAMETLILKCR 435
            MKTFGCSHNQSDSEYMAGQL+AFGY LSD PEEADLWLINTCTVKSPSQSAM+TLI K R
Sbjct: 59   MKTFGCSHNQSDSEYMAGQLAAFGYVLSDNPEEADLWLINTCTVKSPSQSAMDTLITKGR 118

Query: 436  SAKKPLVVAGCVPQGSRNLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPAL 615
            S+KKPLVVAGCVPQGSR+LKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPAL
Sbjct: 119  SSKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPAL 178

Query: 616  NLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTIESLVERVRIVVADGVKEIW 795
            +LPKVRKNKF+EILPINVGCLGACTYCKTKHARGHLGSYT++SLV RVR V+ADGVKEIW
Sbjct: 179  DLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVGRVRTVIADGVKEIW 238

Query: 796  LSSEDTGAYGRDIGVNLPMLLNGIVEELPLDRSTMLRIGMTNPPFILEHLNEIAEVLRHP 975
            LSSEDTGAYGRDIGV LP+LLN IV ELP D  TMLRIGMTNPP+ILEHL E+A VLRHP
Sbjct: 239  LSSEDTGAYGRDIGVTLPILLNAIVSELPPDGGTMLRIGMTNPPYILEHLKEMAVVLRHP 298

Query: 976  CVYSFLHVPVQSGSDSVLTGMNREYTVSQFRTVVDTLHRLVPGMQIATDIICGFPGETDE 1155
            CVYSFLHVPVQSGSD++L+ MNREYTV++FRTVVDTL  LVPGMQIATDIICGFPGETDE
Sbjct: 299  CVYSFLHVPVQSGSDAILSAMNREYTVTEFRTVVDTLTELVPGMQIATDIICGFPGETDE 358

Query: 1156 DFAQTVDLIKEYKFPHVHISQFYPRPGTPAARMKKVPSNVVKKRSRELTSVFESFTPYQG 1335
            +FAQTV LI+EY+FP VHISQFYPRPGTPAARMKKVPS VVKKRSRELTS+FE+FTPY G
Sbjct: 359  EFAQTVSLIQEYRFPQVHISQFYPRPGTPAARMKKVPSAVVKKRSRELTSIFEAFTPYNG 418

Query: 1336 MEGQVERIWITEYATDGVHLVGHTKSYMQVLVVGPDSILGTSTQVRITSVGRWSVFGEVV 1515
            MEG+VERIWI+E ATDG+HLVGHTK YMQVLVV P S++GTS  V+ITSVGRWSVFGE++
Sbjct: 419  MEGRVERIWISEIATDGIHLVGHTKGYMQVLVVAPRSLMGTSAIVKITSVGRWSVFGELI 478

Query: 1516 ----KVDSNSS--------------------CSCSREA---AC-------------GALQ 1575
                +V+ N S                    C+CSREA   AC             G++ 
Sbjct: 479  ETLNQVNDNISLNEEKFSLGKCSPCSVPGEICACSREAEPCACEPQSCEGKISMEEGSVS 538

Query: 1576 REEIPAIPKTKETVDWIL 1629
            R+++  +P+ +    W+L
Sbjct: 539  RKDM--LPENQNLFKWLL 554