BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014905
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricin...   367   1e-99
emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]   362   4e-98
ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a...   360   2e-97
ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabid...   360   2e-97
emb|CBI23583.3| unnamed protein product [Vitis vinifera]              360   2e-97

>ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis]
            gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16,
            putative [Ricinus communis]
          Length = 1051

 Score =  367 bits (942), Expect = 1e-99
 Identities = 178/228 (78%), Positives = 196/228 (85%)
 Frame = +3

Query: 3    AFVEEVVEDIRKGENTECPICLESADDPVLTPCAHRMCRECXXXXXXXXXXXXCPICRQQ 182
            A++EEVVEDIRKGEN ECPIC+E ADDPVLTPCAHRMCREC            CPICR  
Sbjct: 797  AYIEEVVEDIRKGENNECPICMEYADDPVLTPCAHRMCRECLLSSWRTPTTGLCPICRTL 856

Query: 183  LLKNELITCPTDNQFRVDVENDWKESSKVSKLLDCLEKLARKGSGEKSIVFSQWTSFFDL 362
            L K +L+TCPT+N+FRV+VE +WKESSKVSKLL+CLE++ R   GEKSI+FSQWTSF DL
Sbjct: 857  LKKADLLTCPTENKFRVNVEENWKESSKVSKLLECLERIRRSDCGEKSIIFSQWTSFLDL 916

Query: 363  LQIPLNRRGIRFLRFDGKLSQKNREYVLKEFSDSKEKMVLLMSLKAGGVGLNLTAASNVF 542
            L+IPL RR I FLRFDGKL QK RE  LKEF+++KEKMVLLMSLKAGGVGLNLTAASNVF
Sbjct: 917  LEIPLRRRAIGFLRFDGKLVQKQRERTLKEFNETKEKMVLLMSLKAGGVGLNLTAASNVF 976

Query: 543  LMDPWWNPAVEEQAIMRIHRIGQKRTVCVRRFIVKDTVEERMQQVQAR 686
            LMDPWWNPAVEEQAIMRIHRIGQKRTV VRRFIVKDT+EERMQQVQAR
Sbjct: 977  LMDPWWNPAVEEQAIMRIHRIGQKRTVTVRRFIVKDTLEERMQQVQAR 1024


>emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]
          Length = 1249

 Score =  362 bits (929), Expect = 4e-98
 Identities = 176/228 (77%), Positives = 198/228 (86%)
 Frame = +3

Query: 3    AFVEEVVEDIRKGENTECPICLESADDPVLTPCAHRMCRECXXXXXXXXXXXXCPICRQQ 182
            AFVEEVV  IR+GENTECPICLESADDPVLTPCAH MCREC            CPICR+ 
Sbjct: 995  AFVEEVVGGIRRGENTECPICLESADDPVLTPCAHLMCRECLLSSWRTPLSGLCPICRKL 1054

Query: 183  LLKNELITCPTDNQFRVDVENDWKESSKVSKLLDCLEKLARKGSGEKSIVFSQWTSFFDL 362
            L K +LITCP++N+FR+DVE +WKESSK+S+LL CLE++++   GEKSIVFSQWTSF DL
Sbjct: 1055 LKKTDLITCPSENRFRIDVEKNWKESSKISELLHCLERISQSRIGEKSIVFSQWTSFLDL 1114

Query: 363  LQIPLNRRGIRFLRFDGKLSQKNREYVLKEFSDSKEKMVLLMSLKAGGVGLNLTAASNVF 542
            L+IPL RRGI FLR+DGK+ QK RE +LKEFS+++EKMVLLMSLKAGGVGLNLTAASNVF
Sbjct: 1115 LEIPLRRRGIGFLRYDGKVVQKQRERILKEFSETEEKMVLLMSLKAGGVGLNLTAASNVF 1174

Query: 543  LMDPWWNPAVEEQAIMRIHRIGQKRTVCVRRFIVKDTVEERMQQVQAR 686
            LMDPWWNPAVEEQAIMRIHRIGQ+RTV VRRFIVKDTVEERMQQVQAR
Sbjct: 1175 LMDPWWNPAVEEQAIMRIHRIGQERTVRVRRFIVKDTVEERMQQVQAR 1222


>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Cucumis sativus] gi|449523563|ref|XP_004168793.1|
            PREDICTED: putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 3-like [Cucumis sativus]
          Length = 1113

 Score =  360 bits (923), Expect = 2e-97
 Identities = 178/228 (78%), Positives = 196/228 (85%)
 Frame = +3

Query: 3    AFVEEVVEDIRKGENTECPICLESADDPVLTPCAHRMCRECXXXXXXXXXXXXCPICRQQ 182
            A+VE+VVE IR+GENTECPICLE ADD VLTPCAHRMCREC            CPICRQ 
Sbjct: 859  AYVEDVVECIRRGENTECPICLEFADDAVLTPCAHRMCRECLLSSWRTPTCGFCPICRQM 918

Query: 183  LLKNELITCPTDNQFRVDVENDWKESSKVSKLLDCLEKLARKGSGEKSIVFSQWTSFFDL 362
            L K ELITCP+++ FRVDVE +WKESSKVSKLL+CLE++   GSGEKSIVFSQWT+FFDL
Sbjct: 919  LRKTELITCPSESPFRVDVEKNWKESSKVSKLLECLERINLLGSGEKSIVFSQWTTFFDL 978

Query: 363  LQIPLNRRGIRFLRFDGKLSQKNREYVLKEFSDSKEKMVLLMSLKAGGVGLNLTAASNVF 542
            L+IPL R+ I F RFDGKLSQK+RE VLKEFS+SKE  V+L+SLKAGGVGLNLTAASNVF
Sbjct: 979  LEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLNLTAASNVF 1038

Query: 543  LMDPWWNPAVEEQAIMRIHRIGQKRTVCVRRFIVKDTVEERMQQVQAR 686
            +MDPWWNPAVEEQAIMRIHRIGQKR V VRRFIVKDTVEERMQQVQAR
Sbjct: 1039 IMDPWWNPAVEEQAIMRIHRIGQKRRVRVRRFIVKDTVEERMQQVQAR 1086


>ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
            gi|60390960|sp|Q9FIY7.1|SM3L3_ARATH RecName:
            Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 3; Short=SMARCA3-like protein 3
            gi|10178192|dbj|BAB11616.1| DNA repair protein-like
            [Arabidopsis thaliana] gi|332007595|gb|AED94978.1|
            Helicase protein with RING/U-box domain [Arabidopsis
            thaliana]
          Length = 1277

 Score =  360 bits (923), Expect = 2e-97
 Identities = 174/228 (76%), Positives = 195/228 (85%)
 Frame = +3

Query: 3    AFVEEVVEDIRKGENTECPICLESADDPVLTPCAHRMCRECXXXXXXXXXXXXCPICRQQ 182
            A++EEV++D+R G + ECPICLESADDPVLTPCAHRMCREC            CPICR  
Sbjct: 1023 AYIEEVIQDLRDGNSKECPICLESADDPVLTPCAHRMCRECLLTSWRSPSCGLCPICRTI 1082

Query: 183  LLKNELITCPTDNQFRVDVENDWKESSKVSKLLDCLEKLARKGSGEKSIVFSQWTSFFDL 362
            L + ELI+CPTD+ FRVDV  +WKESSKVS+LL CLEK+ + GSGEKSIVFSQWTSF DL
Sbjct: 1083 LKRTELISCPTDSIFRVDVVKNWKESSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDL 1142

Query: 363  LQIPLNRRGIRFLRFDGKLSQKNREYVLKEFSDSKEKMVLLMSLKAGGVGLNLTAASNVF 542
            L+IPL RRG  FLRFDGKL+QK RE VLKEF+++K+K +LLMSLKAGGVGLNLTAAS+VF
Sbjct: 1143 LEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMSLKAGGVGLNLTAASSVF 1202

Query: 543  LMDPWWNPAVEEQAIMRIHRIGQKRTVCVRRFIVKDTVEERMQQVQAR 686
            LMDPWWNPAVEEQAIMRIHRIGQKRTV VRRFIVKDTVEERMQQVQAR
Sbjct: 1203 LMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQVQAR 1250


>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
          Length = 1287

 Score =  360 bits (923), Expect = 2e-97
 Identities = 175/228 (76%), Positives = 197/228 (86%)
 Frame = +3

Query: 3    AFVEEVVEDIRKGENTECPICLESADDPVLTPCAHRMCRECXXXXXXXXXXXXCPICRQQ 182
            AFVEEVV  IR+GENTECPICLESADDPVLTPCAH MCREC            CPICR+ 
Sbjct: 939  AFVEEVVGGIRRGENTECPICLESADDPVLTPCAHLMCRECLLSSWRTPLSGLCPICRKL 998

Query: 183  LLKNELITCPTDNQFRVDVENDWKESSKVSKLLDCLEKLARKGSGEKSIVFSQWTSFFDL 362
            L K +LITCP++N+FR+DVE +WKESSK+S+LL CLE++++   GEKSIVFSQWTSF DL
Sbjct: 999  LKKTDLITCPSENRFRIDVEKNWKESSKISELLHCLERISQSRIGEKSIVFSQWTSFLDL 1058

Query: 363  LQIPLNRRGIRFLRFDGKLSQKNREYVLKEFSDSKEKMVLLMSLKAGGVGLNLTAASNVF 542
            L+IPL RRGI FLR+DGK+ QK RE +LKEFS+++EK VLLMSLKAGGVGLNLTAASNVF
Sbjct: 1059 LEIPLRRRGIGFLRYDGKVVQKQRERILKEFSETEEKTVLLMSLKAGGVGLNLTAASNVF 1118

Query: 543  LMDPWWNPAVEEQAIMRIHRIGQKRTVCVRRFIVKDTVEERMQQVQAR 686
            LMDPWWNPAVEEQAIMRIHRIGQ+RTV VRRFIVKDTVEERMQQVQAR
Sbjct: 1119 LMDPWWNPAVEEQAIMRIHRIGQERTVRVRRFIVKDTVEERMQQVQAR 1166