BLASTX nr result

ID: Cimicifuga21_contig00014705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014705
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35630.1| unknown [Lotus japonicus]                              270   2e-70
ref|XP_002514188.1| AP-4 complex subunit sigma-1, putative [Rici...   270   2e-70
ref|NP_001236735.1| uncharacterized protein LOC100306047 [Glycin...   270   3e-70
ref|XP_002308286.1| predicted protein [Populus trichocarpa] gi|2...   270   3e-70
ref|XP_004135683.1| PREDICTED: AP-4 complex subunit sigma-like [...   270   4e-70

>gb|AFK35630.1| unknown [Lotus japonicus]
          Length = 143

 Score =  270 bits (691), Expect = 2e-70
 Identities = 132/143 (92%), Positives = 139/143 (97%)
 Frame = +3

Query: 54  MGIRFILLVNKQGQTRLAQYYEYLTIEQRRALEGEIVRKCLARNEQQCSFVEHRNYKIVY 233
           MGIRF+L+VNKQGQTRLAQYYEYLTIE+RRALEGEIVRKCLARNE QCSFVEHRNYKIVY
Sbjct: 1   MGIRFVLMVNKQGQTRLAQYYEYLTIEERRALEGEIVRKCLARNEHQCSFVEHRNYKIVY 60

Query: 234 RRYASLFFLVGVDNDENELATLEFIHLLVETMDRLFGNVCELDIMFHLEKVHFMLEEMIM 413
           RRYASLFFLVGVD DENELA LEFIHLLVETMDR FGNVCELDIMFHLEKVHFMLEEM+M
Sbjct: 61  RRYASLFFLVGVDADENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVM 120

Query: 414 NGCIVETNKANILSPIQLMDKSS 482
           NGCIVET+KANIL+PIQLMDK+S
Sbjct: 121 NGCIVETSKANILAPIQLMDKAS 143


>ref|XP_002514188.1| AP-4 complex subunit sigma-1, putative [Ricinus communis]
           gi|223546644|gb|EEF48142.1| AP-4 complex subunit
           sigma-1, putative [Ricinus communis]
          Length = 143

 Score =  270 bits (691), Expect = 2e-70
 Identities = 131/143 (91%), Positives = 140/143 (97%)
 Frame = +3

Query: 54  MGIRFILLVNKQGQTRLAQYYEYLTIEQRRALEGEIVRKCLARNEQQCSFVEHRNYKIVY 233
           MGIRFIL+VNKQGQTRLAQYYE+LT+E+RRALEGEIVRKCLARN+QQCSFVEHRNYKIVY
Sbjct: 1   MGIRFILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFVEHRNYKIVY 60

Query: 234 RRYASLFFLVGVDNDENELATLEFIHLLVETMDRLFGNVCELDIMFHLEKVHFMLEEMIM 413
           RRYASLFFLVGVDNDENELA LEFIHLLVETMDR FGNVCELDIMFHLEK HFMLEEM+M
Sbjct: 61  RRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVM 120

Query: 414 NGCIVETNKANILSPIQLMDKSS 482
           NGCIVET+KANIL+PIQLMDK+S
Sbjct: 121 NGCIVETSKANILAPIQLMDKTS 143


>ref|NP_001236735.1| uncharacterized protein LOC100306047 [Glycine max]
           gi|356494887|ref|XP_003516313.1| PREDICTED: AP-4 complex
           subunit sigma-like [Glycine max]
           gi|255627383|gb|ACU14036.1| unknown [Glycine max]
          Length = 143

 Score =  270 bits (690), Expect = 3e-70
 Identities = 130/143 (90%), Positives = 140/143 (97%)
 Frame = +3

Query: 54  MGIRFILLVNKQGQTRLAQYYEYLTIEQRRALEGEIVRKCLARNEQQCSFVEHRNYKIVY 233
           MGIRF+L+VNKQGQTRLAQYYEYLT+E+RRALEGEIVRKCLARNEQQCSFVEHRNYKIVY
Sbjct: 1   MGIRFVLMVNKQGQTRLAQYYEYLTLEERRALEGEIVRKCLARNEQQCSFVEHRNYKIVY 60

Query: 234 RRYASLFFLVGVDNDENELATLEFIHLLVETMDRLFGNVCELDIMFHLEKVHFMLEEMIM 413
           RRYASLFFLVGVD+DENELA LEFIHLLVETMDR FGNVCELDIMFHLEK HFMLEEM+M
Sbjct: 61  RRYASLFFLVGVDDDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVM 120

Query: 414 NGCIVETNKANILSPIQLMDKSS 482
           NGCIVET+K+NIL+PIQLMDK+S
Sbjct: 121 NGCIVETSKSNILTPIQLMDKTS 143


>ref|XP_002308286.1| predicted protein [Populus trichocarpa] gi|222854262|gb|EEE91809.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  270 bits (690), Expect = 3e-70
 Identities = 130/143 (90%), Positives = 140/143 (97%)
 Frame = +3

Query: 54  MGIRFILLVNKQGQTRLAQYYEYLTIEQRRALEGEIVRKCLARNEQQCSFVEHRNYKIVY 233
           MGIRFIL+VNKQGQTRLAQYYE+LT+E+RRALEGEIVRKCLARN+QQCSFVEHRNYKI+Y
Sbjct: 1   MGIRFILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFVEHRNYKIIY 60

Query: 234 RRYASLFFLVGVDNDENELATLEFIHLLVETMDRLFGNVCELDIMFHLEKVHFMLEEMIM 413
           RRYASLFFLVGVDNDENELA LEFIHLLVETMDR FGNVCELDIMFHLEK HFMLEEM+M
Sbjct: 61  RRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVM 120

Query: 414 NGCIVETNKANILSPIQLMDKSS 482
           NGCIVET+K+NILSPIQLMDK+S
Sbjct: 121 NGCIVETSKSNILSPIQLMDKTS 143


>ref|XP_004135683.1| PREDICTED: AP-4 complex subunit sigma-like [Cucumis sativus]
           gi|449489825|ref|XP_004158427.1| PREDICTED: AP-4 complex
           subunit sigma-like [Cucumis sativus]
          Length = 143

 Score =  270 bits (689), Expect = 4e-70
 Identities = 132/143 (92%), Positives = 139/143 (97%)
 Frame = +3

Query: 54  MGIRFILLVNKQGQTRLAQYYEYLTIEQRRALEGEIVRKCLARNEQQCSFVEHRNYKIVY 233
           MGIRFIL+VNKQGQTRLAQYYE LT+E+RRALEGEIVRKCLARNEQQCSFVEHRNYKIVY
Sbjct: 1   MGIRFILMVNKQGQTRLAQYYENLTLEERRALEGEIVRKCLARNEQQCSFVEHRNYKIVY 60

Query: 234 RRYASLFFLVGVDNDENELATLEFIHLLVETMDRLFGNVCELDIMFHLEKVHFMLEEMIM 413
           RRYASLFFLVGVDNDENELA LEFIHLLVETMDR FGNVCELDIMFHLEK HFMLEEM+M
Sbjct: 61  RRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVM 120

Query: 414 NGCIVETNKANILSPIQLMDKSS 482
           NGCIVET+K+NILSPIQLM+KSS
Sbjct: 121 NGCIVETSKSNILSPIQLMEKSS 143


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