BLASTX nr result

ID: Cimicifuga21_contig00013850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013850
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267558.1| PREDICTED: elongation factor P [Vitis vinife...   356   6e-96
ref|NP_001236933.1| uncharacterized protein LOC100500109 [Glycin...   335   1e-89
ref|NP_001236791.1| uncharacterized protein LOC100306051 [Glycin...   334   2e-89
ref|XP_004137675.1| PREDICTED: elongation factor P-like [Cucumis...   330   3e-88
gb|AFK47180.1| unknown [Lotus japonicus]                              330   4e-88

>ref|XP_002267558.1| PREDICTED: elongation factor P [Vitis vinifera]
           gi|297735541|emb|CBI18035.3| unnamed protein product
           [Vitis vinifera]
          Length = 236

 Score =  356 bits (913), Expect = 6e-96
 Identities = 171/203 (84%), Positives = 188/203 (92%)
 Frame = -3

Query: 932 PMRAFPKTPSRSRFPRIFAFTSNDIKVGSSIVVDGAPWRVLEFLHVKPGKGAAFVRTKMR 753
           PMR  P  P RSRF +I AFTSNDIKVGSSI VDGAPW+VLEFLHVKPGKGAAFVRTKMR
Sbjct: 34  PMRCAPPRPYRSRFSKILAFTSNDIKVGSSIEVDGAPWKVLEFLHVKPGKGAAFVRTKMR 93

Query: 752 NYVTGNTVEKTFRAGSSIVEADIVKETKQYTYKDGAQFVFMDLSTYEEIRLNASDVGDKT 573
           NYVTGNTV+KTFRAG SI EA++ KETKQYTYKDGAQFVFMDLST+EEIRLN SDVG++T
Sbjct: 94  NYVTGNTVDKTFRAGCSIDEANVYKETKQYTYKDGAQFVFMDLSTFEEIRLNESDVGERT 153

Query: 572 KWLKEGMDCNLLFWNGKVIDFDLPITVKLSVVAVDPGLKGDTAQGGSKPATVDTGAVVNV 393
           KWLKEGMDCN+LFWNGK+IDF+LPIT+KL+VV VDPG+KGDTAQGGSKPAT+DTGAVVNV
Sbjct: 154 KWLKEGMDCNVLFWNGKIIDFELPITIKLTVVDVDPGIKGDTAQGGSKPATLDTGAVVNV 213

Query: 392 PLFVNTGDQILVDTRTGQYMNRA 324
           PLFVN GDQILVDTRTG+Y +RA
Sbjct: 214 PLFVNIGDQILVDTRTGEYRSRA 236


>ref|NP_001236933.1| uncharacterized protein LOC100500109 [Glycine max]
           gi|255629257|gb|ACU14973.1| unknown [Glycine max]
          Length = 233

 Score =  335 bits (859), Expect = 1e-89
 Identities = 162/205 (79%), Positives = 184/205 (89%), Gaps = 2/205 (0%)
 Frame = -3

Query: 932 PMRAFPKTPSRS--RFPRIFAFTSNDIKVGSSIVVDGAPWRVLEFLHVKPGKGAAFVRTK 759
           P R   +TPS S  RF RI+A TSNDIKVG+++ VDGAPWRVLEFLHVKPGK AAFVRTK
Sbjct: 29  PSRLPMRTPSSSKPRFLRIYALTSNDIKVGTNLEVDGAPWRVLEFLHVKPGKDAAFVRTK 88

Query: 758 MRNYVTGNTVEKTFRAGSSIVEADIVKETKQYTYKDGAQFVFMDLSTYEEIRLNASDVGD 579
           M+NY+TGNTVEKTFRAGSSI +AD+ KETKQ+TYKDGAQFVFMDL+TYEE RL   ++GD
Sbjct: 89  MKNYITGNTVEKTFRAGSSIEQADVFKETKQFTYKDGAQFVFMDLNTYEEFRLGEKEIGD 148

Query: 578 KTKWLKEGMDCNLLFWNGKVIDFDLPITVKLSVVAVDPGLKGDTAQGGSKPATVDTGAVV 399
           +TKWLKEGMDCNLL WNGKVID +LPIT+KL+VV VDPGLKGDTAQGG+KPAT+DTGAVV
Sbjct: 149 RTKWLKEGMDCNLLLWNGKVIDVELPITIKLAVVDVDPGLKGDTAQGGTKPATLDTGAVV 208

Query: 398 NVPLFVNTGDQILVDTRTGQYMNRA 324
           NVPLFVN GD+ILVD+RTGQYM+RA
Sbjct: 209 NVPLFVNVGDEILVDSRTGQYMSRA 233


>ref|NP_001236791.1| uncharacterized protein LOC100306051 [Glycine max]
           gi|255627395|gb|ACU14042.1| unknown [Glycine max]
          Length = 237

 Score =  334 bits (856), Expect = 2e-89
 Identities = 157/198 (79%), Positives = 180/198 (90%)
 Frame = -3

Query: 917 PKTPSRSRFPRIFAFTSNDIKVGSSIVVDGAPWRVLEFLHVKPGKGAAFVRTKMRNYVTG 738
           P + S+ RF RI+A TSNDIKVG+++ VDGAPWRVLEFLHVKPGKGAAFVRTKM+NY+TG
Sbjct: 40  PSSSSKPRFLRIYALTSNDIKVGTNLEVDGAPWRVLEFLHVKPGKGAAFVRTKMKNYITG 99

Query: 737 NTVEKTFRAGSSIVEADIVKETKQYTYKDGAQFVFMDLSTYEEIRLNASDVGDKTKWLKE 558
           NTVEKTFRAGSSI +AD+ KETKQ+TYKDG QFVFMDL+TYEE RL   ++GD+TKWLKE
Sbjct: 100 NTVEKTFRAGSSIEQADVFKETKQFTYKDGVQFVFMDLNTYEEFRLGEKEIGDRTKWLKE 159

Query: 557 GMDCNLLFWNGKVIDFDLPITVKLSVVAVDPGLKGDTAQGGSKPATVDTGAVVNVPLFVN 378
           GMDCNLL WNGKVID +LPIT+KL+VV VDPGLKGDTAQGG+KPAT+DT AVVNVPLFVN
Sbjct: 160 GMDCNLLLWNGKVIDVELPITIKLTVVDVDPGLKGDTAQGGTKPATLDTNAVVNVPLFVN 219

Query: 377 TGDQILVDTRTGQYMNRA 324
            GD+ILVD+RTGQYM+RA
Sbjct: 220 VGDEILVDSRTGQYMSRA 237


>ref|XP_004137675.1| PREDICTED: elongation factor P-like [Cucumis sativus]
           gi|449523916|ref|XP_004168969.1| PREDICTED: elongation
           factor P-like [Cucumis sativus]
          Length = 235

 Score =  330 bits (847), Expect = 3e-88
 Identities = 158/202 (78%), Positives = 187/202 (92%)
 Frame = -3

Query: 929 MRAFPKTPSRSRFPRIFAFTSNDIKVGSSIVVDGAPWRVLEFLHVKPGKGAAFVRTKMRN 750
           +R+F  + SR+ F RI+A TSNDIKVG++I VDGAPWRVLEFLHVKPGKGAAFVRTK+RN
Sbjct: 35  LRSFSPS-SRTGFFRIYALTSNDIKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRN 93

Query: 749 YVTGNTVEKTFRAGSSIVEADIVKETKQYTYKDGAQFVFMDLSTYEEIRLNASDVGDKTK 570
           YVTGNTVEKTFRAGSS+ EA++ KE KQ+TYKDG+QFVFMDL+TYEEIRLNA+DVGD+TK
Sbjct: 94  YVTGNTVEKTFRAGSSLEEANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTK 153

Query: 569 WLKEGMDCNLLFWNGKVIDFDLPITVKLSVVAVDPGLKGDTAQGGSKPATVDTGAVVNVP 390
           WLKEGMDC +LFWNGKVIDF++PIT++L+VV VDPGLKGDTAQGGSKPAT++TGAVV+VP
Sbjct: 154 WLKEGMDCIVLFWNGKVIDFEVPITIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVSVP 213

Query: 389 LFVNTGDQILVDTRTGQYMNRA 324
           LF+N GD I++DTRTGQY +RA
Sbjct: 214 LFINVGDSIVIDTRTGQYTSRA 235


>gb|AFK47180.1| unknown [Lotus japonicus]
          Length = 229

 Score =  330 bits (846), Expect = 4e-88
 Identities = 158/209 (75%), Positives = 184/209 (88%), Gaps = 9/209 (4%)
 Frame = -3

Query: 923 AFPKTPS---------RSRFPRIFAFTSNDIKVGSSIVVDGAPWRVLEFLHVKPGKGAAF 771
           +FP  PS         + RF +I+A TSNDIKVGS++ VDGAPWRVLEFLHVKPGKGAAF
Sbjct: 21  SFPSNPSLLPMRNPSSKPRFFKIYALTSNDIKVGSNVEVDGAPWRVLEFLHVKPGKGAAF 80

Query: 770 VRTKMRNYVTGNTVEKTFRAGSSIVEADIVKETKQYTYKDGAQFVFMDLSTYEEIRLNAS 591
           VRTK++NY+TGNTV+KTFRAGSSI +ADI+KETKQ+TYKDG+QFVFMDL++YEE+RL+  
Sbjct: 81  VRTKLKNYLTGNTVDKTFRAGSSIEQADILKETKQFTYKDGSQFVFMDLNSYEEVRLDEK 140

Query: 590 DVGDKTKWLKEGMDCNLLFWNGKVIDFDLPITVKLSVVAVDPGLKGDTAQGGSKPATVDT 411
           D+GD+TKWLKEGMDC++L WNGKVID DLPITVKL+VV VDPGLKGDTAQGGSKP T+DT
Sbjct: 141 DIGDRTKWLKEGMDCSILLWNGKVIDIDLPITVKLTVVDVDPGLKGDTAQGGSKPTTLDT 200

Query: 410 GAVVNVPLFVNTGDQILVDTRTGQYMNRA 324
           GAVVNVPLFVN GD+ILVDTR G YM+RA
Sbjct: 201 GAVVNVPLFVNVGDEILVDTRNGVYMSRA 229


Top