BLASTX nr result

ID: Cimicifuga21_contig00013504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013504
         (1234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275160.1| PREDICTED: WD repeat-containing protein 82-B...   591   e-166
emb|CBI34875.3| unnamed protein product [Vitis vinifera]              591   e-166
ref|XP_002298537.1| predicted protein [Populus trichocarpa] gi|2...   571   e-160
ref|XP_002521457.1| COMPASS component SWD2, putative [Ricinus co...   570   e-160
ref|XP_002324005.1| predicted protein [Populus trichocarpa] gi|2...   565   e-159

>ref|XP_002275160.1| PREDICTED: WD repeat-containing protein 82-B-like [Vitis vinifera]
          Length = 339

 Score =  591 bits (1523), Expect = e-166
 Identities = 287/333 (86%), Positives = 306/333 (91%), Gaps = 1/333 (0%)
 Frame = +3

Query: 141  SLTELTDETVRNMAIGAAFTDCGGKINSIDFHRTEDLLITTSEDDSVRLYDIANATLLKT 320
            SLTEL D+TVR+M+IGA F+D  GKINS+DFHRT+DLL+T SEDDSVRLYDIANA LLKT
Sbjct: 3    SLTELDDDTVRSMSIGALFSDFVGKINSLDFHRTDDLLVTASEDDSVRLYDIANAKLLKT 62

Query: 321  TYHKKHGADRICFTHHPSSVICSSIHNLDSTGESLR*LSMYDNRCLRYFKGHKDRVISLC 500
            TYHKKHGADRICFTHHPSSVICSS HNLDSTGESLR LSMYDNRCLRYFKGHK+RV+SLC
Sbjct: 63   TYHKKHGADRICFTHHPSSVICSSRHNLDSTGESLRYLSMYDNRCLRYFKGHKERVVSLC 122

Query: 501  MSPINDSFMSGSMDRSVRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEGGAIKLF 680
            MSPINDSFMSGS+D SVRIWDLRVN+CQGIL LRGRP VAYDQQGLVFAVAMEGGAIKLF
Sbjct: 123  MSPINDSFMSGSLDHSVRIWDLRVNSCQGILRLRGRPTVAYDQQGLVFAVAMEGGAIKLF 182

Query: 681  DSRSYDKGPFDTFFVGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSE 860
            DSRSYDKGPFDTFFVGGDTAEV DIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFS E
Sbjct: 183  DSRSYDKGPFDTFFVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLE 242

Query: 861  PSSNVITEATFTPDGQYVVSGSGDGNLHAWSISMRNEVACWNSHIGVTTCLKWAPRRVMF 1040
            PS +   EATFTPDGQYVVSGSGDG LHAWSISMR+EVACWNS+IGVT+CLKWAPRR MF
Sbjct: 243  PSPSTTIEATFTPDGQYVVSGSGDGTLHAWSISMRHEVACWNSNIGVTSCLKWAPRRAMF 302

Query: 1041 VAASSILTFWIPN-SKSNVEADNVEPEAGIQRE 1136
            VAAS++LTFWIPN SKS  +  N +PEAG Q E
Sbjct: 303  VAASTVLTFWIPNASKSTADPGNTDPEAGPQSE 335


>emb|CBI34875.3| unnamed protein product [Vitis vinifera]
          Length = 338

 Score =  591 bits (1523), Expect = e-166
 Identities = 287/333 (86%), Positives = 306/333 (91%), Gaps = 1/333 (0%)
 Frame = +3

Query: 141  SLTELTDETVRNMAIGAAFTDCGGKINSIDFHRTEDLLITTSEDDSVRLYDIANATLLKT 320
            SLTEL D+TVR+M+IGA F+D  GKINS+DFHRT+DLL+T SEDDSVRLYDIANA LLKT
Sbjct: 2    SLTELDDDTVRSMSIGALFSDFVGKINSLDFHRTDDLLVTASEDDSVRLYDIANAKLLKT 61

Query: 321  TYHKKHGADRICFTHHPSSVICSSIHNLDSTGESLR*LSMYDNRCLRYFKGHKDRVISLC 500
            TYHKKHGADRICFTHHPSSVICSS HNLDSTGESLR LSMYDNRCLRYFKGHK+RV+SLC
Sbjct: 62   TYHKKHGADRICFTHHPSSVICSSRHNLDSTGESLRYLSMYDNRCLRYFKGHKERVVSLC 121

Query: 501  MSPINDSFMSGSMDRSVRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEGGAIKLF 680
            MSPINDSFMSGS+D SVRIWDLRVN+CQGIL LRGRP VAYDQQGLVFAVAMEGGAIKLF
Sbjct: 122  MSPINDSFMSGSLDHSVRIWDLRVNSCQGILRLRGRPTVAYDQQGLVFAVAMEGGAIKLF 181

Query: 681  DSRSYDKGPFDTFFVGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSE 860
            DSRSYDKGPFDTFFVGGDTAEV DIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFS E
Sbjct: 182  DSRSYDKGPFDTFFVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLE 241

Query: 861  PSSNVITEATFTPDGQYVVSGSGDGNLHAWSISMRNEVACWNSHIGVTTCLKWAPRRVMF 1040
            PS +   EATFTPDGQYVVSGSGDG LHAWSISMR+EVACWNS+IGVT+CLKWAPRR MF
Sbjct: 242  PSPSTTIEATFTPDGQYVVSGSGDGTLHAWSISMRHEVACWNSNIGVTSCLKWAPRRAMF 301

Query: 1041 VAASSILTFWIPN-SKSNVEADNVEPEAGIQRE 1136
            VAAS++LTFWIPN SKS  +  N +PEAG Q E
Sbjct: 302  VAASTVLTFWIPNASKSTADPGNTDPEAGPQSE 334


>ref|XP_002298537.1| predicted protein [Populus trichocarpa] gi|222845795|gb|EEE83342.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  571 bits (1472), Expect = e-160
 Identities = 274/321 (85%), Positives = 298/321 (92%), Gaps = 1/321 (0%)
 Frame = +3

Query: 138  SSLTELTDETVRNMAIGAAFTDCGGKINSIDFHRTEDLLITTSEDDSVRLYDIANATLLK 317
            +SLTEL D+TVR+M++GA F++ GGKINSIDFHR +DLL+T SEDDSVRLYDIA+A LLK
Sbjct: 4    TSLTELDDDTVRSMSVGAVFSEFGGKINSIDFHRKDDLLVTASEDDSVRLYDIASAKLLK 63

Query: 318  TTYHKKHGADRICFTHHPSSVICSSIHNLDSTGESLR*LSMYDNRCLRYFKGHKDRVISL 497
            TT+HKKHGADRICFTHHPSSVICSS +NLDSTGESLR LSMYDNRCLRYFKGHK+RV+SL
Sbjct: 64   TTFHKKHGADRICFTHHPSSVICSSTYNLDSTGESLRYLSMYDNRCLRYFKGHKERVVSL 123

Query: 498  CMSPINDSFMSGSMDRSVRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEGGAIKL 677
            CMSPINDSFMSGS+D SVRIWDLRVNACQGIL LRGRP VAYDQQGLVFAVAMEGGAIKL
Sbjct: 124  CMSPINDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAYDQQGLVFAVAMEGGAIKL 183

Query: 678  FDSRSYDKGPFDTFFVGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSS 857
            FDSRSYDKGPFDTF VGGDTAEV DIKFSNDGKSMLLTTT+NNIYVLDAYGGEKRCGFS 
Sbjct: 184  FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTSNNIYVLDAYGGEKRCGFSL 243

Query: 858  EPSSNVITEATFTPDGQYVVSGSGDGNLHAWSISMRNEVACWNSHIGVTTCLKWAPRRVM 1037
            EPS N   EATFTPDGQYVVSGSGDG LHAW+I+MRNEV+CWNSHIG+ +CLKWAPRR M
Sbjct: 244  EPSPNTKIEATFTPDGQYVVSGSGDGTLHAWNINMRNEVSCWNSHIGIASCLKWAPRRAM 303

Query: 1038 FVAASSILTFWIP-NSKSNVE 1097
            FVAAS++LTFWIP +SKS VE
Sbjct: 304  FVAASTVLTFWIPDSSKSTVE 324


>ref|XP_002521457.1| COMPASS component SWD2, putative [Ricinus communis]
            gi|223539356|gb|EEF40947.1| COMPASS component SWD2,
            putative [Ricinus communis]
          Length = 338

 Score =  570 bits (1470), Expect = e-160
 Identities = 280/333 (84%), Positives = 296/333 (88%), Gaps = 1/333 (0%)
 Frame = +3

Query: 141  SLTELTDETVRNMAIGAAFTDCGGKINSIDFHRTEDLLITTSEDDSVRLYDIANATLLKT 320
            SL  L D+TVR+M+IGA F+D GGKINS+DFHR +DLL+T SEDDSVRLYDIA A LLKT
Sbjct: 2    SLNALDDDTVRSMSIGAVFSDFGGKINSVDFHRKDDLLVTASEDDSVRLYDIATAKLLKT 61

Query: 321  TYHKKHGADRICFTHHPSSVICSSIHNLDSTGESLR*LSMYDNRCLRYFKGHKDRVISLC 500
            TYHKKHGADRICFTHHPSSVICSS +NLDSTGESLR LSMYDNRCLRYFKGHKDRV+SLC
Sbjct: 62   TYHKKHGADRICFTHHPSSVICSSKYNLDSTGESLRYLSMYDNRCLRYFKGHKDRVVSLC 121

Query: 501  MSPINDSFMSGSMDRSVRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEGGAIKLF 680
            MSPINDSFMS S+D SVRIWDLRVNACQGILHLRGRP VAYDQQGLVFAVAMEGGAIKLF
Sbjct: 122  MSPINDSFMSASLDHSVRIWDLRVNACQGILHLRGRPTVAYDQQGLVFAVAMEGGAIKLF 181

Query: 681  DSRSYDKGPFDTFFVGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSE 860
            DSRSYDKGPFDTF VGGDTAEV DIKFSNDGKSMLLTTT+NNIYVLDAYGGEKRCGFS E
Sbjct: 182  DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTSNNIYVLDAYGGEKRCGFSLE 241

Query: 861  PSSNVITEATFTPDGQYVVSGSGDGNLHAWSISMRNEVACWNSHIGVTTCLKWAPRRVMF 1040
            PS N   EATFTPDGQYVVSGSGDG LHAW+I+MRNEVA WNSHIGV +C KWAPRR MF
Sbjct: 242  PSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINMRNEVASWNSHIGVASCFKWAPRRAMF 301

Query: 1041 VAASSILTFWIPN-SKSNVEADNVEPEAGIQRE 1136
            VAASS+LTFWIPN SKS  E   +E E   Q E
Sbjct: 302  VAASSVLTFWIPNPSKSIGEPRAMETEGVAQPE 334


>ref|XP_002324005.1| predicted protein [Populus trichocarpa] gi|222867007|gb|EEF04138.1|
            predicted protein [Populus trichocarpa]
          Length = 328

 Score =  565 bits (1457), Expect = e-159
 Identities = 265/314 (84%), Positives = 293/314 (93%)
 Frame = +3

Query: 141  SLTELTDETVRNMAIGAAFTDCGGKINSIDFHRTEDLLITTSEDDSVRLYDIANATLLKT 320
            SLTEL D+TVR+M+IGA F+D GGKINS+DFHR +DLL+T SEDDSVRLYDIA+A LLKT
Sbjct: 2    SLTELDDDTVRSMSIGAVFSDFGGKINSVDFHRKDDLLVTASEDDSVRLYDIASAKLLKT 61

Query: 321  TYHKKHGADRICFTHHPSSVICSSIHNLDSTGESLR*LSMYDNRCLRYFKGHKDRVISLC 500
            TYHKKHG DRICFTHHPSSVICSS+++LDSTGESLR LS+YDNRCLRYFKGHKD+V+SLC
Sbjct: 62   TYHKKHGTDRICFTHHPSSVICSSVYHLDSTGESLRYLSLYDNRCLRYFKGHKDKVVSLC 121

Query: 501  MSPINDSFMSGSMDRSVRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEGGAIKLF 680
            MSPINDSFMS S+D S+RIWDLRVNACQGILHLRGRP VAYDQQGLVFAVAMEGGAIKLF
Sbjct: 122  MSPINDSFMSSSLDHSIRIWDLRVNACQGILHLRGRPTVAYDQQGLVFAVAMEGGAIKLF 181

Query: 681  DSRSYDKGPFDTFFVGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSE 860
            DSRSYDKGPFDTF VGGDTAEV DIKFSNDGKSMLLTTT+NNIYVLDAYGG+KRCGFS E
Sbjct: 182  DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTSNNIYVLDAYGGDKRCGFSLE 241

Query: 861  PSSNVITEATFTPDGQYVVSGSGDGNLHAWSISMRNEVACWNSHIGVTTCLKWAPRRVMF 1040
            PS +   EATFTPDGQYVVSGSGDG LHAW+I+M+NEV+CWNSHIG+ +CLKWAPRR MF
Sbjct: 242  PSPSTTIEATFTPDGQYVVSGSGDGTLHAWNINMQNEVSCWNSHIGIASCLKWAPRRAMF 301

Query: 1041 VAASSILTFWIPNS 1082
            VAAS++LTFWIP+S
Sbjct: 302  VAASTVLTFWIPDS 315


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