BLASTX nr result

ID: Cimicifuga21_contig00013408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013408
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309969.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002307074.1| predicted protein [Populus trichocarpa] gi|2...    62   9e-08
ref|XP_002445983.1| hypothetical protein SORBIDRAFT_07g029060 [S...    60   2e-07
dbj|BAD10714.1| hypothetical protein [Oryza sativa Japonica Group]     56   5e-06
gb|EEC83762.1| hypothetical protein OsI_29654 [Oryza sativa Indi...    56   5e-06

>ref|XP_002309969.1| predicted protein [Populus trichocarpa] gi|222852872|gb|EEE90419.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
 Frame = +3

Query: 249 HFQIRVHKPSRNLESLISRQWRVRVYESNTTVERENFDKFDWDFVLSITELLCLVPSAIL 428
           HF+ +  K S NL         ++ Y+S+ T+  ++  +F+ D  LS+ ELLC+  S+I+
Sbjct: 52  HFKPQTPKSSFNLT--------LKAYQSDPTIPTQDSKQFNLDHFLSVAELLCIFSSSII 103

Query: 429 SIGCVVNWTFLNSQKS----IQLNRVLVWQLGLLVGAAVIGNLIRRRQWGRI 572
           +I   +N+T LNS++     I  N    W + ++V   VIG  IRRR W R+
Sbjct: 104 TISYALNYTVLNSKRGVLGVIGSNTGFAWGMVVMVSGVVIGAWIRRRMWWRV 155


>ref|XP_002307074.1| predicted protein [Populus trichocarpa] gi|222856523|gb|EEE94070.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
 Frame = +3

Query: 300 SRQWRVRVYESNTTVERENFDKFDWDFVLSITELLCLVPSAILSIGCVVNWTF--LNSQK 473
           S  + ++ Y+S+ T+  +  ++F+ D  LSI ELLC++ S+I++I   +N TF    +  
Sbjct: 57  SFSFTLKAYQSDPTIRTQVSNQFNLDQFLSIAELLCIISSSIITISYALNCTFSKTGALG 116

Query: 474 SIQLNRVLVWQLGLLVGAAVIGNLIRRRQWGRI 572
            I  N    W + ++V   VIG  IRRRQW RI
Sbjct: 117 VIGSNTGFAWGMVVMVSGVVIGAWIRRRQWWRI 149


>ref|XP_002445983.1| hypothetical protein SORBIDRAFT_07g029060 [Sorghum bicolor]
           gi|241942333|gb|EES15478.1| hypothetical protein
           SORBIDRAFT_07g029060 [Sorghum bicolor]
          Length = 285

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/69 (50%), Positives = 41/69 (59%)
 Frame = +3

Query: 366 FDWDFVLSITELLCLVPSAILSIGCVVNWTFLNSQKSIQLNRVLVWQLGLLVGAAVIGNL 545
           F  D +LS  ELLCL P AI S+ C     FL +  S     +LV Q  LLVGA  IG+L
Sbjct: 69  FGPDSLLSAAELLCLAPPAICSVVCAARLVFLPASASAGSPPLLVLQYVLLVGAVAIGSL 128

Query: 546 IRRRQWGRI 572
           IRRRQ GR+
Sbjct: 129 IRRRQSGRL 137


>dbj|BAD10714.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 296

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 33/72 (45%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
 Frame = +3

Query: 375 DFVLSITELLCLVPSAILSIGCVVNWTFLNSQKS------IQLNRVLVWQLGLLVGAAVI 536
           D +LS  ELLCL P AI S+ C     F     +      +   R+ V Q  LLVGA  I
Sbjct: 68  DALLSAAELLCLAPPAICSVVCAARLVFPPPTTTGAPASGLVGGRMFVVQYVLLVGAVAI 127

Query: 537 GNLIRRRQWGRI 572
           G+LIRRRQWGR+
Sbjct: 128 GSLIRRRQWGRL 139


>gb|EEC83762.1| hypothetical protein OsI_29654 [Oryza sativa Indica Group]
          Length = 269

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 33/72 (45%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
 Frame = +3

Query: 375 DFVLSITELLCLVPSAILSIGCVVNWTFLNSQKS------IQLNRVLVWQLGLLVGAAVI 536
           D +LS  ELLCL P AI S+ C     F     +      +   R+ V Q  LLVGA  I
Sbjct: 68  DALLSAAELLCLAPPAICSVVCAARLVFPPPTTTGAPASGLVGGRMFVVQYVLLVGAVAI 127

Query: 537 GNLIRRRQWGRI 572
           G+LIRRRQWGR+
Sbjct: 128 GSLIRRRQWGRL 139


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