BLASTX nr result

ID: Cimicifuga21_contig00013390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013390
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162193.1| PREDICTED: guanylate-binding protein 4-like ...    76   5e-12
ref|XP_004146960.1| PREDICTED: guanylate-binding protein 4-like ...    76   5e-12
emb|CBI17922.3| unnamed protein product [Vitis vinifera]               75   1e-11
ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like ...    75   1e-11
ref|XP_002520972.1| interferon-induced guanylate-binding protein...    74   2e-11

>ref|XP_004162193.1| PREDICTED: guanylate-binding protein 4-like [Cucumis sativus]
          Length = 619

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 36/51 (70%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
 Frame = +3

Query: 3   LDLDRWAIPICVIIVALVLYWRCC-VRKHGSNWVLPLYNSQKGGS-RPRSD 149
           LDLDRWAIPI V+   LV+YWRCC  RK+GS+W+LPLYN+ K GS RPRSD
Sbjct: 569 LDLDRWAIPIGVLAAVLVVYWRCCGRRKYGSHWLLPLYNNPKNGSQRPRSD 619


>ref|XP_004146960.1| PREDICTED: guanylate-binding protein 4-like [Cucumis sativus]
          Length = 626

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 36/51 (70%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
 Frame = +3

Query: 3   LDLDRWAIPICVIIVALVLYWRCC-VRKHGSNWVLPLYNSQKGGS-RPRSD 149
           LDLDRWAIPI V+   LV+YWRCC  RK+GS+W+LPLYN+ K GS RPRSD
Sbjct: 576 LDLDRWAIPIGVLAAVLVVYWRCCGRRKYGSHWLLPLYNNPKNGSQRPRSD 626


>emb|CBI17922.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 37/51 (72%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
 Frame = +3

Query: 3   LDLDRWAIPICVIIVALVLYWRCC-VRKHGSNWVLPLYNSQKGGS-RPRSD 149
           LDLDRWAIPICV++  LVLYWRC   RKHGS  +LPLYN+ KGGS R RSD
Sbjct: 552 LDLDRWAIPICVLVAILVLYWRCYGRRKHGSRGLLPLYNNHKGGSNRRRSD 602


>ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like [Vitis vinifera]
          Length = 674

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 37/51 (72%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
 Frame = +3

Query: 3   LDLDRWAIPICVIIVALVLYWRCC-VRKHGSNWVLPLYNSQKGGS-RPRSD 149
           LDLDRWAIPICV++  LVLYWRC   RKHGS  +LPLYN+ KGGS R RSD
Sbjct: 624 LDLDRWAIPICVLVAILVLYWRCYGRRKHGSRGLLPLYNNHKGGSNRRRSD 674


>ref|XP_002520972.1| interferon-induced guanylate-binding protein, putative [Ricinus
           communis] gi|223539809|gb|EEF41389.1| interferon-induced
           guanylate-binding protein, putative [Ricinus communis]
          Length = 631

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/51 (66%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
 Frame = +3

Query: 3   LDLDRWAIPICVIIVALVLYWRCC-VRKHGSNWVLPLYNSQKGG-SRPRSD 149
           LDLDRWA+PI  +   LV+YWRC   RKHGS W+LPLY++QKGG +RPRSD
Sbjct: 581 LDLDRWAVPIGFVAAVLVIYWRCYGRRKHGSQWLLPLYSNQKGGPNRPRSD 631


Top