BLASTX nr result

ID: Cimicifuga21_contig00013384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013384
         (1416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524742.1| 5-methyltetrahydrofolate:homocysteine methyl...   517   e-144
ref|XP_002307602.1| homocysteine s-methyltransferase [Populus tr...   515   e-144
ref|XP_002300824.1| homocysteine s-methyltransferase [Populus tr...   514   e-143
ref|XP_002283044.1| PREDICTED: homocysteine S-methyltransferase ...   508   e-141
ref|XP_003632324.1| PREDICTED: homocysteine S-methyltransferase ...   501   e-139

>ref|XP_002524742.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
            [Ricinus communis] gi|223535926|gb|EEF37585.1|
            5-methyltetrahydrofolate:homocysteine methyltransferase,
            putative [Ricinus communis]
          Length = 343

 Score =  517 bits (1332), Expect = e-144
 Identities = 258/332 (77%), Positives = 287/332 (86%)
 Frame = -1

Query: 1293 SQPSSAMLDFLKKSNGYAVIDGGLATELERHGANLNDPLWSAKCLIHSPQLIRRVHLDYL 1114
            + PSS M DFLK+S G AVIDGGLATELERHGA+LNDPLWSAKCL+ SP LIR VHLDYL
Sbjct: 7    ANPSSLMTDFLKQSGGVAVIDGGLATELERHGADLNDPLWSAKCLLTSPHLIRMVHLDYL 66

Query: 1113 EAGADIIITASYQATIQGFEAKGLSREESEVLLKKSVEIALEARDIYYGSHTECSYDDIG 934
            EAGADIIITASYQATIQGFEAKG S  ESE LLKKSVEIA EAR++Y+      + DD  
Sbjct: 67   EAGADIIITASYQATIQGFEAKGFSSAESEALLKKSVEIACEAREVYHDKCLAGACDDNN 126

Query: 933  NGRTHKQRSILVAASIGSYGAYLADGSEYSGDYGDTVTLSTLKDFHRRRVQVLAESGADL 754
            +GR  K+R ILVAAS+GSYGAYLADGSEYSGDYG+ VTL TLKDFHRRRVQVLAE+GADL
Sbjct: 127  DGRVLKKRPILVAASVGSYGAYLADGSEYSGDYGEAVTLGTLKDFHRRRVQVLAEAGADL 186

Query: 753  IAFETIPNKLEAQAYSELLEEEDITVQAWFSFNSKDGVNVVSGDSLFECASIADKSEKVV 574
            IAFET+PN++EAQAY+ELLEEEDI V AWFSFNSKDG+NVVSGDSL ECASIA+   KV+
Sbjct: 187  IAFETVPNRVEAQAYAELLEEEDIKVPAWFSFNSKDGINVVSGDSLLECASIAESCRKVI 246

Query: 573  AVGINCTSPRFIQGLILSIKKVTTKPILVYPNSGETYDPVRKEWVQSSGACEEDFISHVN 394
            AVGINCT P FI GLILSIKKVT+KPIL+YPNSGE+YD  RKEWVQ++G  +EDF+S+VN
Sbjct: 247  AVGINCTPPSFIHGLILSIKKVTSKPILIYPNSGESYDADRKEWVQNTGVTDEDFVSYVN 306

Query: 393  KWREVGASLFGGCCRTTPNTIRAISKTLSKGS 298
            KW EVGASL GGCCRTTPNTIRAI +TLS  S
Sbjct: 307  KWCEVGASLVGGCCRTTPNTIRAIYRTLSNRS 338


>ref|XP_002307602.1| homocysteine s-methyltransferase [Populus trichocarpa]
            gi|222857051|gb|EEE94598.1| homocysteine
            s-methyltransferase [Populus trichocarpa]
          Length = 341

 Score =  515 bits (1327), Expect = e-144
 Identities = 258/337 (76%), Positives = 290/337 (86%)
 Frame = -1

Query: 1308 MGFTTSQPSSAMLDFLKKSNGYAVIDGGLATELERHGANLNDPLWSAKCLIHSPQLIRRV 1129
            MG   ++ SS M DFL++S G A+IDGGLATELERHGA+LNDPLWSAKCL+ SP L+R V
Sbjct: 1    MGHPAAETSSFMTDFLRQSGGVAIIDGGLATELERHGADLNDPLWSAKCLLTSPHLVREV 60

Query: 1128 HLDYLEAGADIIITASYQATIQGFEAKGLSREESEVLLKKSVEIALEARDIYYGSHTECS 949
            HLDYLEAGADIIITASYQATIQGFEAKG S EESE LL+KSV+IA EARDIYY    + S
Sbjct: 61   HLDYLEAGADIIITASYQATIQGFEAKGFSGEESESLLRKSVKIACEARDIYYDRCQKGS 120

Query: 948  YDDIGNGRTHKQRSILVAASIGSYGAYLADGSEYSGDYGDTVTLSTLKDFHRRRVQVLAE 769
             D   NGR  KQR ILVAASIGSYGAYLADGSEYSG+YGD +TL TLKDFHRRRVQ+LAE
Sbjct: 121  PDS-NNGRVLKQRPILVAASIGSYGAYLADGSEYSGNYGDAITLETLKDFHRRRVQILAE 179

Query: 768  SGADLIAFETIPNKLEAQAYSELLEEEDITVQAWFSFNSKDGVNVVSGDSLFECASIADK 589
            SGADLIAFET+PNK+EAQAY ELL+EEDI + AWFSFNSKDGVNVVSGDSL +CASIA+ 
Sbjct: 180  SGADLIAFETVPNKVEAQAYVELLKEEDIKIPAWFSFNSKDGVNVVSGDSLLDCASIAES 239

Query: 588  SEKVVAVGINCTSPRFIQGLILSIKKVTTKPILVYPNSGETYDPVRKEWVQSSGACEEDF 409
             + VVAVGINCT PRFI GLILSIKKVTTKPIL+YPNSGE+YD  RKEWVQ++G  ++DF
Sbjct: 240  CQNVVAVGINCTPPRFIHGLILSIKKVTTKPILIYPNSGESYDGKRKEWVQNTGISDQDF 299

Query: 408  ISHVNKWREVGASLFGGCCRTTPNTIRAISKTLSKGS 298
            +S+VNKW E+GA+L GGCCRTTPNTIRAI +TLS  S
Sbjct: 300  VSYVNKWCEIGAALVGGCCRTTPNTIRAIYRTLSSRS 336


>ref|XP_002300824.1| homocysteine s-methyltransferase [Populus trichocarpa]
            gi|222842550|gb|EEE80097.1| homocysteine
            s-methyltransferase [Populus trichocarpa]
          Length = 332

 Score =  514 bits (1323), Expect = e-143
 Identities = 254/330 (76%), Positives = 285/330 (86%)
 Frame = -1

Query: 1275 MLDFLKKSNGYAVIDGGLATELERHGANLNDPLWSAKCLIHSPQLIRRVHLDYLEAGADI 1096
            M DFL++S G A+IDGGLATELERHGA+LNDPLWSAKCL+ SP L+R VHLDYLEAGADI
Sbjct: 1    MTDFLRQSGGVAIIDGGLATELERHGADLNDPLWSAKCLLTSPHLVRAVHLDYLEAGADI 60

Query: 1095 IITASYQATIQGFEAKGLSREESEVLLKKSVEIALEARDIYYGSHTECSYDDIGNGRTHK 916
            IITASYQATIQGFEAKG SRE+SE LL+KSVEIA EARDIYYG   E S D   +GR  K
Sbjct: 61   IITASYQATIQGFEAKGFSREDSEALLRKSVEIACEARDIYYGRCREGSPDGSDDGRVLK 120

Query: 915  QRSILVAASIGSYGAYLADGSEYSGDYGDTVTLSTLKDFHRRRVQVLAESGADLIAFETI 736
             R ILVAAS+GSYGAYLADGSEYSG+YGD +TL TLKDFHRRRVQ+LAESGADLIAFET+
Sbjct: 121  HRPILVAASVGSYGAYLADGSEYSGNYGDAITLETLKDFHRRRVQILAESGADLIAFETV 180

Query: 735  PNKLEAQAYSELLEEEDITVQAWFSFNSKDGVNVVSGDSLFECASIADKSEKVVAVGINC 556
            PNK+EAQAY+ELLEEEDI + AWFSFNSKDG+NVVSGDSL ECASIA+  +  VAVGINC
Sbjct: 181  PNKVEAQAYAELLEEEDIKIPAWFSFNSKDGINVVSGDSLLECASIAESCKNAVAVGINC 240

Query: 555  TSPRFIQGLILSIKKVTTKPILVYPNSGETYDPVRKEWVQSSGACEEDFISHVNKWREVG 376
            T PRFI  LILSIKKVTTKPIL+YPNSGE+YD  RKEWVQ++G  ++DF+S+VNKW E+G
Sbjct: 241  TPPRFIHELILSIKKVTTKPILIYPNSGESYDGDRKEWVQNTGISDQDFVSYVNKWCEIG 300

Query: 375  ASLFGGCCRTTPNTIRAISKTLSKGSCVLS 286
            A+L GGCCRTTP+TIRAI KTL   S  LS
Sbjct: 301  AALVGGCCRTTPHTIRAIYKTLPNRSAALS 330


>ref|XP_002283044.1| PREDICTED: homocysteine S-methyltransferase 3 isoform 1 [Vitis
            vinifera] gi|297737089|emb|CBI26290.3| unnamed protein
            product [Vitis vinifera]
          Length = 330

 Score =  508 bits (1309), Expect = e-141
 Identities = 257/334 (76%), Positives = 287/334 (85%)
 Frame = -1

Query: 1308 MGFTTSQPSSAMLDFLKKSNGYAVIDGGLATELERHGANLNDPLWSAKCLIHSPQLIRRV 1129
            MGF T    + M DF+++S GYAVIDGGLATELERHGA+LNDPLWSA CLIHSP LIRRV
Sbjct: 1    MGFATLHSPTFMADFIRQSGGYAVIDGGLATELERHGADLNDPLWSATCLIHSPDLIRRV 60

Query: 1128 HLDYLEAGADIIITASYQATIQGFEAKGLSREESEVLLKKSVEIALEARDIYYGSHTECS 949
            HLDYLEAGA IIITASYQATIQGFEAKGLSREE+EVLL++SVEIA EARDIY   H  C+
Sbjct: 61   HLDYLEAGASIIITASYQATIQGFEAKGLSREEAEVLLRRSVEIACEARDIY---HERCA 117

Query: 948  YDDIGNGRTHKQRSILVAASIGSYGAYLADGSEYSGDYGDTVTLSTLKDFHRRRVQVLAE 769
                  G   +QR ILVAAS+GSYGAYLADGSEYSG YG  VTL TLKDFHRRRVQVLAE
Sbjct: 118  -----KGTCLEQRPILVAASVGSYGAYLADGSEYSGHYGAAVTLETLKDFHRRRVQVLAE 172

Query: 768  SGADLIAFETIPNKLEAQAYSELLEEEDITVQAWFSFNSKDGVNVVSGDSLFECASIADK 589
            SGADLIAFETIPNKLEA+AY+ELL+EE+I + AWFSF S DG+NVVSGDSL ECASIAD 
Sbjct: 173  SGADLIAFETIPNKLEAKAYAELLDEENIKIPAWFSFTSLDGINVVSGDSLIECASIADS 232

Query: 588  SEKVVAVGINCTSPRFIQGLILSIKKVTTKPILVYPNSGETYDPVRKEWVQSSGACEEDF 409
             ++VVAVGINCT PRFI GLIL I+KVTTKP+++YPNSGETYD VRKEWV+SSG  + DF
Sbjct: 233  CKQVVAVGINCTPPRFIHGLILLIQKVTTKPVVIYPNSGETYDGVRKEWVKSSGVQDGDF 292

Query: 408  ISHVNKWREVGASLFGGCCRTTPNTIRAISKTLS 307
            +S+V+KWRE GASLFGGCCRT+P+TIRAIS TLS
Sbjct: 293  VSYVSKWREAGASLFGGCCRTSPHTIRAISMTLS 326


>ref|XP_003632324.1| PREDICTED: homocysteine S-methyltransferase 2-like [Vitis vinifera]
          Length = 335

 Score =  501 bits (1289), Expect = e-139
 Identities = 252/334 (75%), Positives = 282/334 (84%)
 Frame = -1

Query: 1308 MGFTTSQPSSAMLDFLKKSNGYAVIDGGLATELERHGANLNDPLWSAKCLIHSPQLIRRV 1129
            MG    QPSS + DFL ++ G AVIDGGLATELERHGA+LNDPLWSAKCL+ SP LIR V
Sbjct: 1    MGHVDLQPSSFISDFLLQTGGVAVIDGGLATELERHGADLNDPLWSAKCLLSSPHLIRTV 60

Query: 1128 HLDYLEAGADIIITASYQATIQGFEAKGLSREESEVLLKKSVEIALEARDIYYGSHTECS 949
            HLDYLEAGADIIITASYQATIQGFEA+G SR ESE LL+KSVEIA EAR +YY  +    
Sbjct: 61   HLDYLEAGADIIITASYQATIQGFEARGFSRGESEALLRKSVEIACEARKMYYDRY---- 116

Query: 948  YDDIGNGRTHKQRSILVAASIGSYGAYLADGSEYSGDYGDTVTLSTLKDFHRRRVQVLAE 769
                  GR  K R ILVAAS+GSYGAYLADGSEYSG YGD +T+ TLKDFHRRRVQ+LA+
Sbjct: 117  ------GRILKHRPILVAASVGSYGAYLADGSEYSGIYGDEITVETLKDFHRRRVQILAD 170

Query: 768  SGADLIAFETIPNKLEAQAYSELLEEEDITVQAWFSFNSKDGVNVVSGDSLFECASIADK 589
            +GADLIAFET+PNKLEAQAY+ELLEEE+I + AWFSFNSKDGV+VVSGDSL EC SIA+ 
Sbjct: 171  AGADLIAFETVPNKLEAQAYAELLEEENIKIPAWFSFNSKDGVHVVSGDSLLECVSIAES 230

Query: 588  SEKVVAVGINCTSPRFIQGLILSIKKVTTKPILVYPNSGETYDPVRKEWVQSSGACEEDF 409
             +KVV+VGINCT PRFI GLILSIKKVTTKPIL+YPNSGE+YDP +KEWVQ +G   EDF
Sbjct: 231  CKKVVSVGINCTPPRFIHGLILSIKKVTTKPILIYPNSGESYDPEQKEWVQKTGVSVEDF 290

Query: 408  ISHVNKWREVGASLFGGCCRTTPNTIRAISKTLS 307
            +S+VNKW EVGASL GGCCRTTPNTIRAI +TLS
Sbjct: 291  VSYVNKWCEVGASLVGGCCRTTPNTIRAIYRTLS 324


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