BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013321
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]            72   5e-11
ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [S...    69   3e-10
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...    69   4e-10
ref|NP_001061315.2| Os08g0236200 [Oryza sativa Japonica Group] g...    67   1e-09
gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc...    67   1e-09

>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
          Length = 1453

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/48 (64%), Positives = 40/48 (83%)
 Frame = -2

Query: 438 KMLPRSVECVFVGYSGQHKGYRFLHIETGRLYISRHVRFDEDTFPYAQ 295
           K  PRS++CVF+GY+ Q+KGYR L+  TGR+YISRHV FDE+TFP+ Q
Sbjct: 700 KFEPRSLQCVFLGYNSQYKGYRCLYPPTGRVYISRHVIFDEETFPFKQ 747


>ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [Sorghum bicolor]
           gi|241937618|gb|EES10763.1| hypothetical protein
           SORBIDRAFT_06g016046 [Sorghum bicolor]
          Length = 856

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/60 (58%), Positives = 40/60 (66%)
 Frame = -2

Query: 438 KMLPRSVECVFVGYSGQHKGYRFLHIETGRLYISRHVRFDEDTFPYAQHSSASPSVPPTE 259
           K+ PRS  CVF+GYS  HKGYR L + T R+ ISRHV FDE TFP+   S   PS PP E
Sbjct: 86  KLAPRSSLCVFIGYSPDHKGYRCLDLTTNRVIISRHVVFDETTFPF---SLRRPSPPPHE 142


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/59 (52%), Positives = 42/59 (71%)
 Frame = -2

Query: 438 KMLPRSVECVFVGYSGQHKGYRFLHIETGRLYISRHVRFDEDTFPYAQHSSASPSVPPT 262
           K  PRS++CVF+GY+ ++KGYR L+  TGR+YISRHV FDE  +P++ H     S P T
Sbjct: 708 KFDPRSLKCVFLGYNDKYKGYRCLYPPTGRVYISRHVIFDETAYPFSHHYKHLHSQPTT 766


>ref|NP_001061315.2| Os08g0236200 [Oryza sativa Japonica Group]
           gi|255678262|dbj|BAF23229.2| Os08g0236200 [Oryza sativa
           Japonica Group]
          Length = 624

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = -2

Query: 438 KMLPRSVECVFVGYSGQHKGYRFLHIETGRLYISRHVRFDEDTFPYA 298
           K+ PRS  CVF+GY   HKG+R L I T RLYISRHV FD+ TFP+A
Sbjct: 301 KLSPRSAPCVFLGYPASHKGFRCLDISTRRLYISRHVVFDDKTFPFA 347


>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 978

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 30/47 (63%), Positives = 34/47 (72%)
 Frame = -2

Query: 438 KMLPRSVECVFVGYSGQHKGYRFLHIETGRLYISRHVRFDEDTFPYA 298
           K+ PRS  CVF+GY   HKG+R L I T  LYISRHV FDE TFP+A
Sbjct: 273 KLSPRSAACVFLGYPASHKGFRCLDISTRHLYISRHVVFDEQTFPFA 319