BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013295
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516323.1| ATP binding protein, putative [Ricinus commu...   190   1e-46
ref|XP_003630305.1| DNA excision repair protein ERCC-6-like prot...   189   2e-46
ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-...   186   2e-45
ref|XP_002309928.1| chromatin remodeling complex subunit [Populu...   184   7e-45
ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-...   184   9e-45

>ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis]
           gi|223544553|gb|EEF46070.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1109

 Score =  190 bits (482), Expect = 1e-46
 Identities = 97/132 (73%), Positives = 105/132 (79%)
 Frame = +2

Query: 5   ICSFLAWLIHSRLIKKVMVVAPRTHSPIGARS*SAVGLSDKIREYFGSCAKARQYELQFI 184
           IC FLA L HSRLIK+ +VVAP+T      +  +AVGLS K REYFG+  KARQYELQ+I
Sbjct: 436 ICGFLAGLFHSRLIKRALVVAPKTLLAHWIKELAAVGLSRKTREYFGTSLKARQYELQYI 495

Query: 185 FQGTGILLTTYDIVRNNFKSLRGDSYFHDERSEDSITWDYTILDEGHIIKNPSTQRAKSL 364
            Q  GILLTTYDIVRNN KSLRGD YF DE SED  TWDY ILDEGH+IKNPSTQRAKSL
Sbjct: 496 LQDKGILLTTYDIVRNNSKSLRGDDYFADEESEDGYTWDYMILDEGHLIKNPSTQRAKSL 555

Query: 365 LEIPSGHRIIIS 400
           LEIPS HRIIIS
Sbjct: 556 LEIPSAHRIIIS 567


>ref|XP_003630305.1| DNA excision repair protein ERCC-6-like protein [Medicago
           truncatula] gi|355524327|gb|AET04781.1| DNA excision
           repair protein ERCC-6-like protein [Medicago truncatula]
          Length = 1129

 Score =  189 bits (480), Expect = 2e-46
 Identities = 93/132 (70%), Positives = 107/132 (81%)
 Frame = +2

Query: 5   ICSFLAWLIHSRLIKKVMVVAPRTHSPIGARS*SAVGLSDKIREYFGSCAKARQYELQFI 184
           IC FLA L HSRLI++V+VVAP+T  P   +  S VGLS+K +EYFG+CAK R+YELQ+I
Sbjct: 420 ICGFLAGLFHSRLIRRVLVVAPKTLLPHWIKELSVVGLSEKTKEYFGACAKLREYELQYI 479

Query: 185 FQGTGILLTTYDIVRNNFKSLRGDSYFHDERSEDSITWDYTILDEGHIIKNPSTQRAKSL 364
            Q  G+LLTTYDIVRNN KSL+G  YF DE +ED  TWDY ILDEGH+IKNPSTQRAKSL
Sbjct: 480 LQDKGVLLTTYDIVRNNTKSLKGHRYFDDEDNEDGPTWDYMILDEGHLIKNPSTQRAKSL 539

Query: 365 LEIPSGHRIIIS 400
           LEIPS HRIIIS
Sbjct: 540 LEIPSAHRIIIS 551


>ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
          Length = 1030

 Score =  186 bits (471), Expect = 2e-45
 Identities = 90/132 (68%), Positives = 108/132 (81%)
 Frame = +2

Query: 5   ICSFLAWLIHSRLIKKVMVVAPRTHSPIGARS*SAVGLSDKIREYFGSCAKARQYELQFI 184
           +C FLA L HSRLI++V++VAP+T  P   +  SAVGLS+K REYFG+  K R+YELQ+I
Sbjct: 361 MCGFLAGLFHSRLIRRVLIVAPKTLLPHWIKELSAVGLSEKTREYFGTSTKLREYELQYI 420

Query: 185 FQGTGILLTTYDIVRNNFKSLRGDSYFHDERSEDSITWDYTILDEGHIIKNPSTQRAKSL 364
            Q  G+LLTTYDIVRNN KSL+G++YF DE +E+  TWDY ILDEGH+IKNPSTQRAKSL
Sbjct: 421 LQDNGVLLTTYDIVRNNSKSLQGNNYFDDEDNEEGATWDYMILDEGHLIKNPSTQRAKSL 480

Query: 365 LEIPSGHRIIIS 400
           LEIPS HRIIIS
Sbjct: 481 LEIPSAHRIIIS 492


>ref|XP_002309928.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222852831|gb|EEE90378.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1108

 Score =  184 bits (467), Expect = 7e-45
 Identities = 94/132 (71%), Positives = 104/132 (78%)
 Frame = +2

Query: 5   ICSFLAWLIHSRLIKKVMVVAPRTHSPIGARS*SAVGLSDKIREYFGSCAKARQYELQFI 184
           ICSFLA L HS+LIK+V+VVAP+T      +  S VGLS K REYFG+  KAR YELQ+I
Sbjct: 424 ICSFLAGLFHSKLIKRVLVVAPKTLLTHWIKELSVVGLSGKTREYFGTSLKARDYELQYI 483

Query: 185 FQGTGILLTTYDIVRNNFKSLRGDSYFHDERSEDSITWDYTILDEGHIIKNPSTQRAKSL 364
            Q  GILLTTYDIVRNN KSLRGD YF DE SEDS  WDY ILDEGH+IKNPSTQRAKSL
Sbjct: 484 LQDKGILLTTYDIVRNNSKSLRGDHYFLDEESEDSYIWDYMILDEGHLIKNPSTQRAKSL 543

Query: 365 LEIPSGHRIIIS 400
           +EIPS H I+IS
Sbjct: 544 IEIPSAHCIVIS 555


>ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
           gi|296088517|emb|CBI37508.3| unnamed protein product
           [Vitis vinifera]
          Length = 1043

 Score =  184 bits (466), Expect = 9e-45
 Identities = 87/132 (65%), Positives = 105/132 (79%)
 Frame = +2

Query: 5   ICSFLAWLIHSRLIKKVMVVAPRTHSPIGARS*SAVGLSDKIREYFGSCAKARQYELQFI 184
           IC FLA L HS L+++ +VVAP+T      +  SAVGLS+K REY+G+C K RQYELQ++
Sbjct: 365 ICGFLAGLFHSCLLRRAVVVAPKTLLSHWIKELSAVGLSEKTREYYGTCTKTRQYELQYV 424

Query: 185 FQGTGILLTTYDIVRNNFKSLRGDSYFHDERSEDSITWDYTILDEGHIIKNPSTQRAKSL 364
            Q  G+LLTTYDIVRNN KSL G +YFHD+RSED  TWDY ILDEGH+IKNPSTQRAKSL
Sbjct: 425 LQDKGVLLTTYDIVRNNSKSLCGGNYFHDKRSEDDFTWDYMILDEGHLIKNPSTQRAKSL 484

Query: 365 LEIPSGHRIIIS 400
           +EIP  HRI++S
Sbjct: 485 MEIPCAHRIVVS 496