BLASTX nr result

ID: Cimicifuga21_contig00013249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013249
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309990.1| predicted protein [Populus trichocarpa] gi|2...   145   8e-33
ref|XP_002528969.1| chaperone protein DNAj, putative [Ricinus co...   140   2e-31
ref|XP_002337037.1| predicted protein [Populus trichocarpa] gi|2...   136   3e-30
ref|XP_002306321.1| predicted protein [Populus trichocarpa] gi|2...   116   4e-24
ref|NP_001241410.1| uncharacterized protein LOC100811478 [Glycin...   110   2e-22

>ref|XP_002309990.1| predicted protein [Populus trichocarpa] gi|222852893|gb|EEE90440.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  145 bits (365), Expect = 8e-33
 Identities = 84/166 (50%), Positives = 107/166 (64%), Gaps = 6/166 (3%)
 Frame = +3

Query: 54  MSISWQLNPKQVLMFPTVR---SFPKTSRINLISCRANTLE-AQRIGTNLYEILSLESEK 221
           M +S Q++P+     P +    S  K+ +   I C+  T E A R   N YE+LSL S+ 
Sbjct: 1   MEMSLQVSPRTANKLPIMMKKWSRQKSYKHRTILCKTATNEVAFRKKMNFYEVLSLGSQN 60

Query: 222 VGFDEIKKAYRSMARQYHPDVVHPSRKEESTKKFVELQKAYETLSNPISRQKYDFELGYL 401
           VGFDEIKKAYRSMA QYHPDV  PS KEESTK+FVELQKAYETLS+PI+R+ YD ELG +
Sbjct: 61  VGFDEIKKAYRSMALQYHPDVCPPSAKEESTKRFVELQKAYETLSDPIARRMYDLELGMV 120

Query: 402 SRCGTT--GIRSEEWRTDFCKEVWEDQLSGLEMMSNNKKGRKKRAY 533
           +  G    G+ SE+ ++ F +EVWE QL GL   S  +  R+   Y
Sbjct: 121 NSVGFAFEGLPSEDRKSSFPREVWERQLHGLYQRSYARVERRNNGY 166


>ref|XP_002528969.1| chaperone protein DNAj, putative [Ricinus communis]
           gi|223531559|gb|EEF33388.1| chaperone protein DNAj,
           putative [Ricinus communis]
          Length = 165

 Score =  140 bits (353), Expect = 2e-31
 Identities = 78/162 (48%), Positives = 106/162 (65%), Gaps = 6/162 (3%)
 Frame = +3

Query: 69  QLNPKQVLMFPTVRSFPKT-----SRINLISCRANTLEAQRIGTNLYEILSLESEKVGFD 233
           +L+PK   + P +R          ++   I+C    ++ ++  TN YE+LSL+S+ VGFD
Sbjct: 6   KLDPKIEKVVPFLRKIRSRQKGFHNKARTITCSYRIMQEKK--TNFYEVLSLQSKNVGFD 63

Query: 234 EIKKAYRSMARQYHPDVVHPSRKEESTKKFVELQKAYETLSNPISRQKYDFELGYLSRCG 413
           EI+KAYRSMA Q+HPDV   S KEESTK+FVELQKAYETLS+P+SR+ YD+EL  ++  G
Sbjct: 64  EIRKAYRSMALQFHPDVCRLSAKEESTKRFVELQKAYETLSDPVSRRLYDYELNLVASIG 123

Query: 414 T-TGIRSEEWRTDFCKEVWEDQLSGLEMMSNNKKGRKKRAYV 536
               IR EE +  F KEVWE QL GL   S+ +  RK + Y+
Sbjct: 124 LGLEIRMEERKNSFPKEVWEMQLYGLSQRSHIRLQRKNKKYM 165


>ref|XP_002337037.1| predicted protein [Populus trichocarpa] gi|222837896|gb|EEE76261.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  136 bits (343), Expect = 3e-30
 Identities = 82/164 (50%), Positives = 101/164 (61%), Gaps = 4/164 (2%)
 Frame = +3

Query: 54  MSISWQLNPKQVLMFPTVR---SFPKTSRINLISCRANTLE-AQRIGTNLYEILSLESEK 221
           M +S Q++P+     P +    S  K+ +   I C+  T E A R   N YE+LSL S+ 
Sbjct: 1   MEMSLQVSPRTANKLPIMMKKWSRQKSYKHRTILCKTATNEVAFRKKMNFYEVLSLGSQN 60

Query: 222 VGFDEIKKAYRSMARQYHPDVVHPSRKEESTKKFVELQKAYETLSNPISRQKYDFELGYL 401
           VGFDEIKKAYRSMA QYHPDV  PS KEESTK+FVELQKAYETLS+PI+R+ YD EL   
Sbjct: 61  VGFDEIKKAYRSMALQYHPDVCPPSAKEESTKRFVELQKAYETLSDPIARRMYDLEL--- 117

Query: 402 SRCGTTGIRSEEWRTDFCKEVWEDQLSGLEMMSNNKKGRKKRAY 533
                 G+ SE+ +  F +EVWE QL GL   S  +  R    Y
Sbjct: 118 ------GLPSEDRKNSFPREVWERQLHGLYQRSYARVERWNNGY 155


>ref|XP_002306321.1| predicted protein [Populus trichocarpa] gi|222855770|gb|EEE93317.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score =  116 bits (290), Expect = 4e-24
 Identities = 59/105 (56%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
 Frame = +3

Query: 228 FDEIKKAYRSMARQYHPDVVHPSRKEESTKKFVELQKAYETLSNPISRQKYDFELGYLSR 407
           FDEIKKAYRSMA QYHPDV  PS +EESTK+FVELQKAYETLS+P+SR+ +D+ELG ++ 
Sbjct: 14  FDEIKKAYRSMALQYHPDVCTPSAREESTKRFVELQKAYETLSDPVSRRMHDYELGLVNS 73

Query: 408 CGTT--GIRSEEWRTDFCKEVWEDQLSGLEMMSNNKKGRKKRAYV 536
            G    G+  E+ +  F +EVWE QL GL+  S  +  R+   Y+
Sbjct: 74  GGFAFEGLPLEDRKNRFPREVWERQLHGLQQRSYARMERRNNKYM 118


>ref|NP_001241410.1| uncharacterized protein LOC100811478 [Glycine max]
           gi|255639401|gb|ACU19996.1| unknown [Glycine max]
          Length = 188

 Score =  110 bits (275), Expect = 2e-22
 Identities = 66/143 (46%), Positives = 84/143 (58%), Gaps = 8/143 (5%)
 Frame = +3

Query: 117 PKTSRINLISCRANTLEAQRIGTNLYEILSLESEKVGFDEIKKAYRSMARQYHPDVVH-P 293
           P + +   +SCRA TL  +    NLY+ILS+       DEIK+AYRSMA QYHPDV H P
Sbjct: 33  PSSVKFGSVSCRATTLTQE----NLYKILSVSPGSATMDEIKRAYRSMALQYHPDVCHDP 88

Query: 294 SRKEESTKKFVELQKAYETLSNPISRQKYDFELGYLSRCGTTGIRSEEWRTDFCK---EV 464
           S KEEST+ FV+L  AYETLSNP  R++YD ELG  S   +     E WR+       E 
Sbjct: 89  SMKEESTRMFVQLNAAYETLSNPRLREQYDSELGLRSEVMSVSSDHERWRSVSVSSEHER 148

Query: 465 WE----DQLSGLEMMSNNKKGRK 521
           WE    +Q+  L+  S  + G+K
Sbjct: 149 WESRFQEQVIELKTRSRRRMGQK 171


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