BLASTX nr result

ID: Cimicifuga21_contig00013136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013136
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546856.1| PREDICTED: uncharacterized protein LOC100776...    69   6e-10
ref|XP_002512191.1| conserved hypothetical protein [Ricinus comm...    69   6e-10
ref|XP_002313466.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
gb|AFK38242.1| unknown [Medicago truncatula]                           67   2e-09
ref|XP_002297653.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_003546856.1| PREDICTED: uncharacterized protein LOC100776077 [Glycine max]
          Length = 84

 Score = 68.6 bits (166), Expect = 6e-10
 Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
 Frame = +3

Query: 120 LESGAGELLVKVGMFLLVQALVYFILSSSSNVFSNNM-RSTSFKTXXXXXXXXXXXXXXD 296
           +ES  G++L+KV +F+LVQALVY ILS+SSN+F+ NM +S SF+               D
Sbjct: 1   MESSLGDMLIKVVVFILVQALVYLILSNSSNIFNKNMKKSNSFRPARSVSIRRMLALISD 60

Query: 297 SPLGGEPSPSSRGSCQPSTEE 359
            P  GEPSPS +G   PS  +
Sbjct: 61  FPPEGEPSPSPKGPKTPSLHQ 81


>ref|XP_002512191.1| conserved hypothetical protein [Ricinus communis]
           gi|223548735|gb|EEF50225.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 88

 Score = 68.6 bits (166), Expect = 6e-10
 Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
 Frame = +3

Query: 114 MVLESGAGELLVKVGMFLLVQALVYFILSSSSNVFSNNM-RSTSFKTXXXXXXXXXXXXX 290
           M++ES  G++L+KV MF LVQALVY ILS SSN+FSN + RS+SFK              
Sbjct: 2   MIMESSLGDMLLKVAMFALVQALVYIILSKSSNIFSNTVKRSSSFKPARSVSIRRFLAAL 61

Query: 291 XDSPLGGE--PSPSSRGSCQPSTEE 359
            D P  GE  PSP +  S Q ++++
Sbjct: 62  QDLPASGELSPSPKNPASTQDTSQQ 86


>ref|XP_002313466.1| predicted protein [Populus trichocarpa] gi|222849874|gb|EEE87421.1|
           predicted protein [Populus trichocarpa]
          Length = 90

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
 Frame = +3

Query: 120 LESGAGELLVKVGMFLLVQALVYFILSSSSNVFS--NNMRSTSFKTXXXXXXXXXXXXXX 293
           +ES  G++L+KV MF++VQ LVY ILS SSN+FS  N+ RS+SFKT              
Sbjct: 1   MESSLGDVLLKVAMFVIVQGLVYLILSKSSNIFSKTNDKRSSSFKTARSVSIRRILAVLQ 60

Query: 294 DSPLGGEPSPSSRGSCQ 344
           D P GGE SP+S  S Q
Sbjct: 61  DLPPGGELSPASSKSTQ 77


>gb|AFK38242.1| unknown [Medicago truncatula]
          Length = 81

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = +3

Query: 120 LESGAGELLVKVGMFLLVQALVYFILSSSSNVFSNNM-RSTSFKTXXXXXXXXXXXXXXD 296
           ++S  G++L+KV MF+LVQALVY ILS+SSN+FS N+ RS SFK               D
Sbjct: 1   MDSSLGDMLLKVAMFVLVQALVYLILSNSSNIFSKNIKRSNSFKPARSVSIRRMLAYLSD 60

Query: 297 SPLGGEPSPSSRGSCQPSTE 356
            P  GEPSPS+      +T+
Sbjct: 61  FPPEGEPSPSTMSPQSQATQ 80


>ref|XP_002297653.1| predicted protein [Populus trichocarpa] gi|222844911|gb|EEE82458.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/77 (51%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = +3

Query: 114 MVLESGAGELLVKVGMFLLVQALVYFILSSSSNVFS-NNMRSTSFKTXXXXXXXXXXXXX 290
           M +E+   E+L+KV MF+LVQ LVY ILS+SSN+FS N  RS SFK              
Sbjct: 1   MEVEASLAEILIKVAMFVLVQVLVYAILSNSSNIFSKNKTRSFSFKPARSLSIRGFLDAI 60

Query: 291 XDSPLG-GEPSPSSRGS 338
            D PLG  EPSP SRGS
Sbjct: 61  SDMPLGSSEPSPLSRGS 77


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