BLASTX nr result

ID: Cimicifuga21_contig00013128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013128
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26997.3| unnamed protein product [Vitis vinifera]              180   3e-43
ref|XP_002283623.1| PREDICTED: zinc finger protein 6 [Vitis vini...   176   7e-42
ref|XP_002527000.1| zinc finger protein, putative [Ricinus commu...   151   2e-34
ref|XP_002314851.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34
ref|XP_002312409.1| predicted protein [Populus trichocarpa] gi|2...   149   9e-34

>emb|CBI26997.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  180 bits (457), Expect = 3e-43
 Identities = 107/190 (56%), Positives = 122/190 (64%), Gaps = 3/190 (1%)
 Frame = +1

Query: 151 LSLMEDIDYQPEPKPXXXXXXXXVVRLKLFGFNVSEEEEVDSSTKTTPSGSPEESTGYPV 330
           LSLM +IDYQ +             RLK+FGFNVSE+E+V+SS   TPSGSPE S G+P 
Sbjct: 37  LSLMAEIDYQAKATSAPTNG-----RLKIFGFNVSEDEDVESSK--TPSGSPE-SGGFPA 88

Query: 331 TDGRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMAANRNSSYSSHARNPMISAF 510
           T  RKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQM A RN++ +S+ RNPMISAF
Sbjct: 89  TGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMQATRNAA-TSYIRNPMISAF 147

Query: 511 ---XXXXXXXXXXXXXXXXXXXXXXWVYMSRGGVPPFHVSHGCMFQPSSAGRMPQMLTYA 681
                                    WVY+ R G PPFHVSHGC+F PSS+GR    L+YA
Sbjct: 148 APPPHLLAPAGPVVVPAGAAPQSASWVYVPR-GPPPFHVSHGCVF-PSSSGRGAATLSYA 205

Query: 682 XXXXXERRTT 711
                   TT
Sbjct: 206 GGVGESTLTT 215


>ref|XP_002283623.1| PREDICTED: zinc finger protein 6 [Vitis vinifera]
           gi|147769067|emb|CAN72502.1| hypothetical protein
           VITISV_027276 [Vitis vinifera]
          Length = 221

 Score =  176 bits (445), Expect = 7e-42
 Identities = 104/187 (55%), Positives = 119/187 (63%), Gaps = 3/187 (1%)
 Frame = +1

Query: 160 MEDIDYQPEPKPXXXXXXXXVVRLKLFGFNVSEEEEVDSSTKTTPSGSPEESTGYPVTDG 339
           M +IDYQ +             RLK+FGFNVSE+E+V+SS   TPSGSPE S G+P T  
Sbjct: 1   MAEIDYQAKATSAPTNG-----RLKIFGFNVSEDEDVESSK--TPSGSPE-SGGFPATGD 52

Query: 340 RKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMAANRNSSYSSHARNPMISAF--- 510
           RKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQM A RN++ +S+ RNPMISAF   
Sbjct: 53  RKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMQATRNAA-TSYIRNPMISAFAPP 111

Query: 511 XXXXXXXXXXXXXXXXXXXXXXWVYMSRGGVPPFHVSHGCMFQPSSAGRMPQMLTYAXXX 690
                                 WVY+ R G PPFHVSHGC+F PSS+GR    L+YA   
Sbjct: 112 PHLLAPAGPVVVPAGAAPQSASWVYVPR-GPPPFHVSHGCVF-PSSSGRGAATLSYAGGV 169

Query: 691 XXERRTT 711
                TT
Sbjct: 170 GESTLTT 176


>ref|XP_002527000.1| zinc finger protein, putative [Ricinus communis]
           gi|223533635|gb|EEF35372.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 247

 Score =  151 bits (381), Expect = 2e-34
 Identities = 87/175 (49%), Positives = 106/175 (60%), Gaps = 10/175 (5%)
 Frame = +1

Query: 160 MEDIDYQPEPKPXXXXXXXXVVRLKLFGFNVSEEEE------VDSSTKTTPSGSPEESTG 321
           ME++DYQ +P            RLKLFGF+VS++++      +DSS K++ S SPE ++ 
Sbjct: 1   MEELDYQTKPNST-------TTRLKLFGFSVSDDDQDQLLTPIDSSIKSSSSTSPEAAS- 52

Query: 322 YPVTDGRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMAANRNSSYS----SHAR 489
                 RKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQM A RN++ +    S  R
Sbjct: 53  --TDSNRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMQATRNAAAAAAAVSFGR 110

Query: 490 NPMISAFXXXXXXXXXXXXXXXXXXXXXXWVYMSRGGVPPFHVSHGCMFQPSSAG 654
           NPMISAF                      WVY+ R   PPFHV+HGC+F    AG
Sbjct: 111 NPMISAF-APPPHLLAPPGPVVLPAAASSWVYLPR-PAPPFHVTHGCVFPTGPAG 163


>ref|XP_002314851.1| predicted protein [Populus trichocarpa] gi|222863891|gb|EEF01022.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  150 bits (380), Expect = 2e-34
 Identities = 86/158 (54%), Positives = 99/158 (62%), Gaps = 14/158 (8%)
 Frame = +1

Query: 226 RLKLFGFNVSEEEEVDSST---KTTPSGSPEES------TGYPVT---DGRKYECQYCCR 369
           RLKLFGFNVSE+EE  ++T   K++   SP++S      T  P T   D RKYECQYCCR
Sbjct: 16  RLKLFGFNVSEDEEQITTTDSLKSSSCNSPDDSSFATATTTVPATASGDSRKYECQYCCR 75

Query: 370 EFANSQALGGHQNAHKKERQQLKRAQMAANRNSSYS--SHARNPMISAFXXXXXXXXXXX 543
           EFANSQALGGHQNAHKKERQQLKRAQM A RN++ +  S  RNPMISAF           
Sbjct: 76  EFANSQALGGHQNAHKKERQQLKRAQMQATRNAAAAAVSFGRNPMISAFAPPPHLLAQAA 135

Query: 544 XXXXXXXXXXXWVYMSRGGVPPFHVSHGCMFQPSSAGR 657
                      WVY+ R    PFHVSHGC+F    +GR
Sbjct: 136 GQVMVPAASPSWVYLPRAAT-PFHVSHGCVFPSGVSGR 172


>ref|XP_002312409.1| predicted protein [Populus trichocarpa] gi|222852229|gb|EEE89776.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  149 bits (375), Expect = 9e-34
 Identities = 86/161 (53%), Positives = 97/161 (60%), Gaps = 10/161 (6%)
 Frame = +1

Query: 226 RLKLFGFNVSEEEEV-----DSSTKTTPSGSPEES---TGYPVTDGRKYECQYCCREFAN 381
           RLKLFGFNVSE+EE+      SS K++   +P+ S   T     D RKYECQYC REFAN
Sbjct: 18  RLKLFGFNVSEDEELIATTYSSSLKSSSCNTPDSSSFGTATATGDSRKYECQYCSREFAN 77

Query: 382 SQALGGHQNAHKKERQQLKRAQMAANRNSSYS--SHARNPMISAFXXXXXXXXXXXXXXX 555
           SQALGGHQNAHKKERQQLKRAQM A RN++ +  S  RNPMISAF               
Sbjct: 78  SQALGGHQNAHKKERQQLKRAQMQATRNAAAAAVSFGRNPMISAFAPPPHLLAQAAGQVV 137

Query: 556 XXXXXXXWVYMSRGGVPPFHVSHGCMFQPSSAGRMPQMLTY 678
                  WVY+ R   PPFHVSHG +F     GR    LTY
Sbjct: 138 VPEASQSWVYLPR-AAPPFHVSHGSVFPRGVGGRGVGSLTY 177


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