BLASTX nr result

ID: Cimicifuga21_contig00013123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013123
         (1914 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308141.1| predicted protein [Populus trichocarpa] gi|2...   490   e-136
ref|XP_002274545.2| PREDICTED: leucine-rich repeat extensin-like...   489   e-135
ref|XP_002331387.1| predicted protein [Populus trichocarpa] gi|2...   488   e-135
ref|XP_002514492.1| LRX2, putative [Ricinus communis] gi|2235463...   484   e-134
dbj|BAF48663.1| leucine-rich repeat/extensin [Nicotiana plumbagi...   468   e-129

>ref|XP_002308141.1| predicted protein [Populus trichocarpa] gi|222854117|gb|EEE91664.1|
            predicted protein [Populus trichocarpa]
          Length = 525

 Score =  490 bits (1262), Expect = e-136
 Identities = 237/333 (71%), Positives = 271/333 (81%), Gaps = 1/333 (0%)
 Frame = +2

Query: 131  FDNPKLQQAYIALQAWKSAIISDPFNFTANWNGPDVCSYGGVYCAPLPXXXXXXXXXXAG 310
            F+NP++++AYIALQ+WK AI SDP NFTANW G DVCSY G++CAP P          AG
Sbjct: 44   FENPRIRRAYIALQSWKQAIYSDPLNFTANWKGSDVCSYMGIFCAPSPQNKKVRVV--AG 101

Query: 311  IDLNHADIAGYLPTELGLLEDLALFHINSNRFCGVVPETFRRLKLLHELDISNNRFAGPF 490
            IDLNHADIAGYLPTELGLL DLALFHINSNRFCGVVP +F ++KLLHELD+SNNRF G F
Sbjct: 102  IDLNHADIAGYLPTELGLLTDLALFHINSNRFCGVVPNSFSKMKLLHELDLSNNRFVGKF 161

Query: 491  PKVVLDIPSLKYLDLRYNDFEGPIPTQLFDKPLDAIFLNHNRLRFGIPTNLGNSPVSVLV 670
            PKVVL +PSLKYLDLR+N+FEG +P+QLFDKPLDAIFLN NR +FGIP NLGNSPVSVLV
Sbjct: 162  PKVVLSLPSLKYLDLRFNEFEGSVPSQLFDKPLDAIFLNDNRFQFGIPENLGNSPVSVLV 221

Query: 671  LAQNNLGGCIPSSIGNMAGTLNEIILMNDNLTGCLPSEIGLLNQLTVFDVSFNHLQGPLP 850
             A NNLGGCIP SIG M  TLNEIILMNDNLTGCLP +IG+L ++TVFDVSFNHLQG LP
Sbjct: 222  FANNNLGGCIPGSIGKMGKTLNEIILMNDNLTGCLPPQIGMLKEVTVFDVSFNHLQGSLP 281

Query: 851  PSVSQMKILEQLDIAHNGLTGALPPAVCTSLPNLDNFTYSYNYFT-SGGQCASSGKLVVD 1027
             S+  MK +EQLDIAHN  TGA+P +VC  LPNL NFT+S+NYFT     CA+ G  V +
Sbjct: 282  SSIGNMKSVEQLDIAHNSFTGAIPASVC-QLPNLQNFTFSFNYFTGEAPSCAAIGG-VSN 339

Query: 1028 SRQNCIPGNPEQRSPRECSSAAAQPIDCSKFKC 1126
              QNCIPG   QRS ++CSS AA+P+DCSKFKC
Sbjct: 340  GTQNCIPGKTNQRSAKQCSSEAARPVDCSKFKC 372


>ref|XP_002274545.2| PREDICTED: leucine-rich repeat extensin-like protein 2-like [Vitis
            vinifera]
          Length = 610

 Score =  489 bits (1258), Expect = e-135
 Identities = 234/343 (68%), Positives = 274/343 (79%)
 Frame = +2

Query: 98   SSTAATPPVGAFDNPKLQQAYIALQAWKSAIISDPFNFTANWNGPDVCSYGGVYCAPLPX 277
            + +    P   F+NP+L+QAYIALQAWK+AI SDPFNFT+NW GP VCSY GVYCAP   
Sbjct: 28   AQSVVVDPKLKFENPRLRQAYIALQAWKTAIFSDPFNFTSNWVGPQVCSYMGVYCAP--S 85

Query: 278  XXXXXXXXXAGIDLNHADIAGYLPTELGLLEDLALFHINSNRFCGVVPETFRRLKLLHEL 457
                     AGIDLNHADIAGYLP+ELGLL DLALFH+NSNRFCG+VP + +R+KLL+EL
Sbjct: 86   LSNPSLKVVAGIDLNHADIAGYLPSELGLLSDLALFHLNSNRFCGIVPSSLKRMKLLYEL 145

Query: 458  DISNNRFAGPFPKVVLDIPSLKYLDLRYNDFEGPIPTQLFDKPLDAIFLNHNRLRFGIPT 637
            DISNNRF G FP VVL +PSLK+LDLR+N+FEGP+P+QLF+K LDA+FLN NR +FGIP 
Sbjct: 146  DISNNRFVGSFPNVVLSMPSLKFLDLRFNEFEGPVPSQLFNKDLDAVFLNDNRFQFGIPQ 205

Query: 638  NLGNSPVSVLVLAQNNLGGCIPSSIGNMAGTLNEIILMNDNLTGCLPSEIGLLNQLTVFD 817
            NLGNSPVSVLVLA NNLGGCIP SIG M  TLNEIILMNDNLT CLP +IGLL ++TVFD
Sbjct: 206  NLGNSPVSVLVLANNNLGGCIPGSIGKMGKTLNEIILMNDNLTSCLPPQIGLLKEVTVFD 265

Query: 818  VSFNHLQGPLPPSVSQMKILEQLDIAHNGLTGALPPAVCTSLPNLDNFTYSYNYFTSGGQ 997
            VSFNHLQG LPP++ +MK LEQLD+AHN  TGA+PP++C  LP L+NFTYS+NYFT  G+
Sbjct: 266  VSFNHLQGSLPPAIGKMKSLEQLDVAHNSFTGAIPPSIC-QLPRLENFTYSFNYFT--GE 322

Query: 998  CASSGKLVVDSRQNCIPGNPEQRSPRECSSAAAQPIDCSKFKC 1126
                  +  D RQNCIPG  +QRS   CSS AA+P+DCSK KC
Sbjct: 323  APVCAAITGDGRQNCIPGKTDQRSSSMCSSQAARPVDCSKSKC 365



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
 Frame = +2

Query: 1697 GTSTPPAPNGGQH---HEHTPPPAHEGKLTPPPPSNHHQHYTAPPPPSTGGQHHTHRPPP 1867
            G S PP P+         H PPP  + + + PPPS++H HY+ PPPP     H+T  PPP
Sbjct: 395  GPSPPPPPSSKSSPSTRSHPPPP--QSQHSSPPPSSNHYHYSPPPPPPQSSSHYTSPPPP 452

Query: 1868 AHEGK------VSPPPAP 1903
              E        V PPP P
Sbjct: 453  PTEKGSPNAHFVPPPPPP 470


>ref|XP_002331387.1| predicted protein [Populus trichocarpa] gi|222873601|gb|EEF10732.1|
            predicted protein [Populus trichocarpa]
          Length = 481

 Score =  488 bits (1256), Expect = e-135
 Identities = 235/332 (70%), Positives = 269/332 (81%)
 Frame = +2

Query: 131  FDNPKLQQAYIALQAWKSAIISDPFNFTANWNGPDVCSYGGVYCAPLPXXXXXXXXXXAG 310
            F+NP++++AYIALQ+WK AI SDPFNFTANWNG DVCSY GV+CAP P          AG
Sbjct: 43   FENPRIRRAYIALQSWKQAIFSDPFNFTANWNGSDVCSYMGVFCAPSPKNKKIRVV--AG 100

Query: 311  IDLNHADIAGYLPTELGLLEDLALFHINSNRFCGVVPETFRRLKLLHELDISNNRFAGPF 490
            IDLNHADIAGYLPTELGL+ DLAL HINSNRFCGVVP +FR++KLLHELD+SNNR  G F
Sbjct: 101  IDLNHADIAGYLPTELGLIIDLALLHINSNRFCGVVPSSFRKMKLLHELDLSNNRLMGKF 160

Query: 491  PKVVLDIPSLKYLDLRYNDFEGPIPTQLFDKPLDAIFLNHNRLRFGIPTNLGNSPVSVLV 670
            PKVV+ +PSLKYLDLR+N+FEG +P+QLFDKPLDAIFLN NR RFGIP NLGNSP SVLV
Sbjct: 161  PKVVVSLPSLKYLDLRFNEFEGSVPSQLFDKPLDAIFLNDNRFRFGIPENLGNSPASVLV 220

Query: 671  LAQNNLGGCIPSSIGNMAGTLNEIILMNDNLTGCLPSEIGLLNQLTVFDVSFNHLQGPLP 850
            LA NNLGGCIP SIG M+ TLNEIILMNDNLTGCLP +IG+L ++TVFDVSFNHLQG LP
Sbjct: 221  LANNNLGGCIPGSIGKMSKTLNEIILMNDNLTGCLPPQIGMLKEVTVFDVSFNHLQGALP 280

Query: 851  PSVSQMKILEQLDIAHNGLTGALPPAVCTSLPNLDNFTYSYNYFTSGGQCASSGKLVVDS 1030
             S+  MK +EQLDIAHN  TG +P +V   LPNL NFTYS+NYFT      ++   V + 
Sbjct: 281  SSIGNMKSVEQLDIAHNSFTGVVPASV-YQLPNLQNFTYSFNYFTGEAPSCAAIGAVSNG 339

Query: 1031 RQNCIPGNPEQRSPRECSSAAAQPIDCSKFKC 1126
             QNCIPG   QRS ++CSS AA+PIDCSKFKC
Sbjct: 340  TQNCIPGKMNQRSAKQCSSEAARPIDCSKFKC 371


>ref|XP_002514492.1| LRX2, putative [Ricinus communis] gi|223546391|gb|EEF47892.1| LRX2,
            putative [Ricinus communis]
          Length = 766

 Score =  484 bits (1246), Expect = e-134
 Identities = 237/339 (69%), Positives = 272/339 (80%), Gaps = 3/339 (0%)
 Frame = +2

Query: 119  PVGAFDNPKLQQAYIALQAWKSAIISDPFNFTANWNGPDVCSYGGVYCAPLPXXXXXXXX 298
            P   F+NP+L QAYIALQA K +I SDPFNFT NW GP+VCSY GV+CAP P        
Sbjct: 41   PSFKFENPRLGQAYIALQALKQSIFSDPFNFTTNWKGPNVCSYMGVFCAPSPSNPKIRVV 100

Query: 299  XXAGIDLNHADIAGYLPTELGLLEDLALFHINSNRFCGVVPETFRRLKLLHELDISNNRF 478
              AGIDLNHADIAGYLP ELGLL DLALFH+NSNRFCGVVP TFR+LKLLHELD+SNNRF
Sbjct: 101  --AGIDLNHADIAGYLPPELGLLTDLALFHLNSNRFCGVVPATFRKLKLLHELDLSNNRF 158

Query: 479  AGPFPKVVLDIPSLKYLDLRYNDFEGPIPTQLFDKPLDAIFLNHNRLRFGIPTNLGNSPV 658
             G FPKV+L +PSLKYLDLR+N+FEG +P+ LFD+PLDAIFLN NR +FGIP NLGNSPV
Sbjct: 159  VGKFPKVLLSLPSLKYLDLRFNEFEGSVPSNLFDRPLDAIFLNDNRFQFGIPENLGNSPV 218

Query: 659  SVLVLAQNNLGGCIPSSIGNMAGTLNEIILMNDNLTGCLPSEIGLLNQLTVFDVSFNHLQ 838
            SVLVLA NNLGGCIP SIGNM  TLNEIILMNDNLTGCLP EIGLL +LTVFDVSFN+LQ
Sbjct: 219  SVLVLANNNLGGCIPGSIGNMGKTLNEIILMNDNLTGCLPPEIGLLKELTVFDVSFNNLQ 278

Query: 839  GPLPPSVSQMKILEQLDIAHNGLTGALPPAVCTSLPNLDNFTYSYNYFT-SGGQCASSG- 1012
            G LP S+  MK +EQLDIAHN  TG +P ++C  LP+L NFTYS+NYFT     CA+ G 
Sbjct: 279  GSLPSSIGNMKKVEQLDIAHNSFTGVVPASIC-QLPSLQNFTYSFNYFTGEAPSCAAIGG 337

Query: 1013 -KLVVDSRQNCIPGNPEQRSPRECSSAAAQPIDCSKFKC 1126
             +++    +NCIPG  +QRS +ECSS  A+P++CSKFKC
Sbjct: 338  SRVLTKGTKNCIPGKMDQRSAKECSSEKARPVNCSKFKC 376


>dbj|BAF48663.1| leucine-rich repeat/extensin [Nicotiana plumbaginifolia]
            gi|127058167|dbj|BAF48664.1| leucine-rich repeat/extensin
            [Nicotiana plumbaginifolia]
          Length = 725

 Score =  468 bits (1205), Expect = e-129
 Identities = 228/336 (67%), Positives = 270/336 (80%), Gaps = 3/336 (0%)
 Frame = +2

Query: 128  AFDNPKLQQAYIALQAWKSAIISDPFNFTANWNGPDVCSYGGVYCAPLPXXXXXXXXXXA 307
            +F+NPKL+ AYIALQ WK+A+ SDPFNFTANW GP+VCSYGGV+CA             A
Sbjct: 44   SFENPKLRVAYIALQTWKAAMFSDPFNFTANWTGPNVCSYGGVFCAQ--SLTNDSIRVVA 101

Query: 308  GIDLNHADIAGYLPTELGLLEDLALFHINSNRFCGVVPETFRRLKLLHELDISNNRFAGP 487
            GIDLNHADIAGYL  ELGLL DL LFH+NSNRFCG+VP+TF  LKLL ELD+SNNRF G 
Sbjct: 102  GIDLNHADIAGYLVPELGLLTDLVLFHLNSNRFCGIVPKTFSHLKLLRELDLSNNRFVGG 161

Query: 488  FPKVVLDIPSLKYLDLRYNDFEGPIPTQLFDKPLDAIFLNHNRLRFGIPTNLGNSPVSVL 667
            FPKVVL +PSLK+LDLR+NDFEGP+P++LFDK LDA+FLN NR RFGIP NLGNSPVSVL
Sbjct: 162  FPKVVLSLPSLKFLDLRFNDFEGPVPSKLFDKDLDALFLNDNRFRFGIPENLGNSPVSVL 221

Query: 668  VLAQNNLGGCIPSSIGNMAGTLNEIILMNDNLTGCLPSEIGLLNQLTVFDVSFNHLQGPL 847
            V A NNLGGCIP+SIG M+ TLNE+ILMNDNLTGCLP EIG+L +LTVFDVSFN +QGPL
Sbjct: 222  VFANNNLGGCIPASIGKMSNTLNELILMNDNLTGCLPMEIGMLKKLTVFDVSFNKIQGPL 281

Query: 848  PPSVSQMKILEQLDIAHNGLTGALPPAVCTSLPNLDNFTYSYNYFTSGGQ-CAS--SGKL 1018
            P +VS+M+ +EQL++AHN LTG +P ++C  LP L NFTYS+NYFT     CA+  SG+ 
Sbjct: 282  PSTVSRMRSVEQLNVAHNKLTGVIPASIC-QLPRLQNFTYSFNYFTGEAPVCAATRSGR- 339

Query: 1019 VVDSRQNCIPGNPEQRSPRECSSAAAQPIDCSKFKC 1126
            +VD  +NCI G  +QRS +ECSS  A+P DC K +C
Sbjct: 340  IVDGEENCIAGKEDQRSAKECSSDDAKPYDCRKSQC 375


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