BLASTX nr result

ID: Cimicifuga21_contig00013116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013116
         (1634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containin...   335   2e-89
gb|AAO14624.2|AF467900_1 hypothetical protein [Prunus persica]        304   4e-80
ref|XP_004167632.1| PREDICTED: zinc finger CCCH domain-containin...   282   2e-73
ref|XP_004152656.1| PREDICTED: zinc finger CCCH domain-containin...   281   5e-73
gb|AFK47452.1| unknown [Lotus japonicus]                              263   8e-68

>ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like [Vitis
            vinifera]
          Length = 457

 Score =  335 bits (860), Expect = 2e-89
 Identities = 203/456 (44%), Positives = 252/456 (55%), Gaps = 26/456 (5%)
 Frame = +2

Query: 191  QKSKRVTWPSDLNLCQIRLFVSEDPPSQVG---LGAQDNLQVKASWLLHSTGVGVDDQLP 361
            QKSKRV+WPSD+NLCQ+RLF+SED PSQVG   LGAQD+LQ K SWLLHS G+G DD LP
Sbjct: 5    QKSKRVSWPSDVNLCQVRLFLSEDSPSQVGQVGLGAQDHLQAKTSWLLHSNGMGSDDNLP 64

Query: 362  PGFEGAHSTDQLKEEVSQMPLVKWQCPPRFVPNPHWQVVDGEESKEAEIQNQREMRVLEA 541
            PGFEGAH  +QLK ++SQ+PL+ W+CPP+FV N  WQVV GEES E E+Q QREMRVLEA
Sbjct: 65   PGFEGAHPANQLKNKLSQIPLITWRCPPKFVLNFTWQVVAGEESNEVEVQKQREMRVLEA 124

Query: 542  IYPRTSAIXXXXXXXXXXXNSHFEDHQVPLIPITPIEDEDATHXXXXXXXXXXXXXXXXQ 721
            +YPR SAI           +   +D ++ LIPI P+EDE+A                  Q
Sbjct: 125  VYPRPSAIPPNPSVSIDGEDMDNDDQKILLIPIVPVEDEEAALEMSADTVAPINIPMSSQ 184

Query: 722  QHTSPHSWGPPKPQSNILAAPKNASANEVSXXXXXXXXXXXXXXXXXXXXXXIMRSNEEG 901
                P   G P   S+      N  ANE                        +MRSNE+G
Sbjct: 185  SLLLPP--GIPSASSSNAPNIPNPPANENVAAGMVPGVEPDVVAAASAAFTAVMRSNEQG 242

Query: 902  SLIDQXXXXXXXXXXXXXXXXVTDYGTSANNP------RTMXXXXXXXXXXXVFHHATNA 1063
            +LID                 VTD   S++NP      R             V    TN 
Sbjct: 243  NLIDHDLLIKILSNPKIIERIVTDQVVSSSNPQAVPNQRLPPIALSDQPPGHVSRVETNI 302

Query: 1064 ATPSLHPTLXXXXXXXXXXXGFV-------NMPGPAMKPPPV----KDISYYKSLIQQHG 1210
               +  P+            G V       +M GP+   PPV    KDI+YYKSLIQQHG
Sbjct: 303  PLSAAIPS--GPFYSQSNGPGPVPAPRPPPSMVGPSSSSPPVRPVTKDINYYKSLIQQHG 360

Query: 1211 GEKPESHEQAQ--PQFG---NHQYSGTKTEQIQS-SKLRESKTKNKRPCLYFNSSRGCKN 1372
            GE+ E  +Q+Q   QF    NH   G   E + +  K R+SK K  +PC+YF+SSRGC++
Sbjct: 361  GERQEPQDQSQSHSQFANRPNHHVLGMNPETVVTHPKPRDSKPKIMKPCIYFHSSRGCRH 420

Query: 1373 GASCTFHHDMSAQQRIGSMPEVQSAKRMKVDREITG 1480
            GA+C++ HD S QQR+ SMPEVQ+AKRMK+DREITG
Sbjct: 421  GANCSYQHDASLQQRVSSMPEVQNAKRMKMDREITG 456


>gb|AAO14624.2|AF467900_1 hypothetical protein [Prunus persica]
          Length = 441

 Score =  304 bits (779), Expect = 4e-80
 Identities = 186/451 (41%), Positives = 233/451 (51%), Gaps = 21/451 (4%)
 Frame = +2

Query: 188  SQKSKRVTWPSDLNLCQIRLFVSEDPPSQVGLGAQDNLQVKASWLLHSTGVGVDDQLPPG 367
            S K KRV+W SD+NLCQ++LF+ E+ PSQVGL AQD+LQ KASWL HS+G G DD LPPG
Sbjct: 4    SHKLKRVSWASDVNLCQVKLFLLEESPSQVGLSAQDHLQAKASWLSHSSGTGSDDILPPG 63

Query: 368  FEGAHSTDQLKEEVSQMPLVKWQCPPRFVPNPHWQVVDGEESKEAEIQNQREMRVLEAIY 547
            FEGA+S +QL+  VSQ+PL+KW+CPPR V N  WQVV GEESKE EIQNQRE+RVLEA+Y
Sbjct: 64   FEGAYSANQLQINVSQIPLIKWRCPPRVVLNFTWQVVCGEESKEVEIQNQREIRVLEAVY 123

Query: 548  PRTSAIXXXXXXXXXXXNSHFEDHQVPLIPITPIEDEDATHXXXXXXXXXXXXXXXXQQH 727
            PR SAI           +S   D Q P+IPIT IEDED                     H
Sbjct: 124  PRPSAIPLNPSVLADVEDSGHNDVQPPVIPITSIEDEDV------GVDTSSASMAPFNIH 177

Query: 728  TSPHSW----GPPKPQSNILAAPKNASANEVSXXXXXXXXXXXXXXXXXXXXXXIMRSNE 895
            TS  S+    G   P  +++   +N   +                         I+ SNE
Sbjct: 178  TSTQSFLSVQGIAAPSQSVVPNNRNHPTSNKPVAGIPVGVEPDVVAAASAAFGAIVNSNE 237

Query: 896  EGSLIDQXXXXXXXXXXXXXXXXVTDYGTSANNPRTMXXXXXXXXXXXVFHHATNAATPS 1075
             G++ID                 V D       P+               +   +++TPS
Sbjct: 238  HGNMIDHELLIKILSNPKMIEKLVKDPQPMTRPPQMSIADPPPVH----INRTESSSTPS 293

Query: 1076 LHPTLXXXXXXXXXXXGFVNMPG--------------PAMKPPPVKDISYYKSLIQQHGG 1213
                            G    P               PA+ PPP KDI+YYKSLIQQHGG
Sbjct: 294  STALSSGHFYPQPNVAGMGRFPDARPPPHAAISVPSPPAVGPPPAKDINYYKSLIQQHGG 353

Query: 1214 EKPESHEQAQPQFGNH--QYSGTKTEQIQSSKLRESKTKNKRPCLYFNSSRGCKNGASCT 1387
            ++ +S     P FGN    +S    E     K R+SK K  +PC+YFNSSRGC++GA+C 
Sbjct: 354  DRHDSF----PPFGNRHSDHSAINQESNNGYKSRDSKPKIMKPCIYFNSSRGCRHGANCA 409

Query: 1388 FHHDMSAQQR-IGSMPEVQSAKRMKVDREIT 1477
            + HD S Q R   S PEV S KRMK+DREI+
Sbjct: 410  YQHDASFQPRGSSSAPEVHSTKRMKMDREIS 440


>ref|XP_004167632.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
            [Cucumis sativus]
          Length = 444

 Score =  282 bits (721), Expect = 2e-73
 Identities = 172/442 (38%), Positives = 238/442 (53%), Gaps = 14/442 (3%)
 Frame = +2

Query: 194  KSKRVTWPSDLNLCQIRLFVSEDPPSQVGLGAQDNLQVKASWLLHSTGVGV--DDQLPPG 367
            K KRV+W SDLNL Q+RLF SED PSQVGLGAQD+LQ KASWLLHSTG+G+  DD LPPG
Sbjct: 6    KGKRVSWASDLNLRQVRLFSSEDCPSQVGLGAQDHLQAKASWLLHSTGLGLGSDDTLPPG 65

Query: 368  FEGAHSTDQLKEEVSQMPLVKWQCPPRFVPNPHWQVVDGEESKEAEIQNQREMRVLEAIY 547
            FE AH  +Q + ++SQ+P+ +W+CPP+FV N  W+VV GEES+E +++NQREMRV EA+Y
Sbjct: 66   FEVAHPENQWQIKLSQIPVNQWRCPPKFVLNLTWRVVVGEESQEVDVENQREMRVFEAVY 125

Query: 548  PRTSAIXXXXXXXXXXXNSHFEDHQVPLIPITPIEDEDATHXXXXXXXXXXXXXXXXQQH 727
            PR SAI            ++ +D + PLIPITP+EDED                   Q  
Sbjct: 126  PRASAIPPNPSVVPDSERANVDDSRTPLIPITPVEDEDGATESSSDYAIPASGLTSAQPS 185

Query: 728  TSPHSWGPPKPQSNILAAPKNASANEVSXXXXXXXXXXXXXXXXXXXXXXIMRSNEEGSL 907
                + G    Q  +L A  + S N  S                      ++++NE G+ 
Sbjct: 186  LFVPA-GTSTSQHALLNAMCSTS-NVSSMVGVDFGNERDVVAAASAALSALVKTNEVGNS 243

Query: 908  IDQXXXXXXXXXXXXXXXXVTDYGTSANNPRTMXXXXXXXXXXXVFHHATNAATPSLHP- 1084
            ID+                V D G   +  + +           +    TNA   ++ P 
Sbjct: 244  IDRELLVNILNNPKMIEQLVVDSGALTSTQKPISSPDPPLVHMHM--SDTNATNATITPI 301

Query: 1085 -TLXXXXXXXXXXXGFVNMPGPAMKPPPV----------KDISYYKSLIQQHGGEKPESH 1231
             +            G V+   P+ +  PV          +D++YYKSLIQQHGGE+ +  
Sbjct: 302  SSSSFYSQPNGGSVGPVSNAHPSSRGIPVSSLPSTGAPMRDLNYYKSLIQQHGGERQDDP 361

Query: 1232 EQAQPQFGNHQYSGTKTEQIQSSKLRESKTKNKRPCLYFNSSRGCKNGASCTFHHDMSAQ 1411
             + Q    ++Q  GT  E +Q+   R++K K  +PC+YFNSSRGC++GA+C + HD   Q
Sbjct: 362  SRQQFVNRHNQPMGTNQEFLQNQPSRDAKFKIMKPCIYFNSSRGCRHGANCAYQHDPMFQ 421

Query: 1412 QRIGSMPEVQSAKRMKVDREIT 1477
            QR  S+ E+ S+KR KVDREI+
Sbjct: 422  QRSSSVSEMPSSKRTKVDREIS 443


>ref|XP_004152656.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like [Cucumis
            sativus]
          Length = 441

 Score =  281 bits (718), Expect = 5e-73
 Identities = 174/442 (39%), Positives = 237/442 (53%), Gaps = 14/442 (3%)
 Frame = +2

Query: 194  KSKRVTWPSDLNLCQIRLFVSEDPPSQVGLGAQDNLQVKASWLLHSTGVGV--DDQLPPG 367
            K KRV+W SDLNL Q+RLF SED PSQVGLGAQD+LQ KASWLLHSTG+G+  DD LPPG
Sbjct: 6    KGKRVSWASDLNLRQVRLFSSEDCPSQVGLGAQDHLQAKASWLLHSTGLGLGSDDTLPPG 65

Query: 368  FEGAHSTDQLKEEVSQMPLVKWQCPPRFVPNPHWQVVDGEESKEAEIQNQREMRVLEAIY 547
            FE AH  +Q + ++SQ+P+ +W+CPP+FV N  W+VV GEES+E +++NQREMRV EA+Y
Sbjct: 66   FEVAHPENQWQIKLSQIPVNQWRCPPKFVLNLTWRVVVGEESQEVDVENQREMRVFEAVY 125

Query: 548  PRTSAIXXXXXXXXXXXNSHFEDHQVPLIPITPIEDEDATHXXXXXXXXXXXXXXXXQQH 727
            PR SAI            ++ +D + PLIPITP+EDED                   Q  
Sbjct: 126  PRASAIPPNPSVVPDSERANVDDSRTPLIPITPVEDEDGATESSSDYAIPASGLTSAQPS 185

Query: 728  TSPHSWGPPKPQSNILAAPKNASANEVSXXXXXXXXXXXXXXXXXXXXXXIMRSNEEGSL 907
                + G    Q  +L A  + S N  S                      ++++NE G+ 
Sbjct: 186  LFVPA-GTSTSQHALLNAMCSTS-NVSSMVGVDFGNERDVVAAASAALSALVKTNEVGNS 243

Query: 908  IDQXXXXXXXXXXXXXXXXVTDYG--TSANNPRTMXXXXXXXXXXXVFHHATNAATPSLH 1081
            ID+                V D G  TS   P +              H +   AT +  
Sbjct: 244  IDRELLVNILNNPKMIEQLVVDSGALTSTQKPISSPDPPLVH-----MHMSDTNATITPI 298

Query: 1082 PTLXXXXXXXXXXXGFVNMPGPAMKPPPV----------KDISYYKSLIQQHGGEKPESH 1231
             +            G V+   P+ +  PV          +D++YYKSLIQQHGGE+ +  
Sbjct: 299  SSSSFYSQPNGGSVGPVSNAHPSSRGIPVSSLPSTGAPMRDLNYYKSLIQQHGGERQDDP 358

Query: 1232 EQAQPQFGNHQYSGTKTEQIQSSKLRESKTKNKRPCLYFNSSRGCKNGASCTFHHDMSAQ 1411
             + Q    ++Q  GT  E +Q+   R++K K  +PC+YFNSSRGC++GA+C + HD   Q
Sbjct: 359  PRQQFVNRHNQPMGTNQEFLQNQPSRDAKFKIMKPCIYFNSSRGCRHGANCAYQHDPMFQ 418

Query: 1412 QRIGSMPEVQSAKRMKVDREIT 1477
            QR  S+ E+ S+KR KVDREI+
Sbjct: 419  QRSSSVSEMPSSKRTKVDREIS 440


>gb|AFK47452.1| unknown [Lotus japonicus]
          Length = 418

 Score =  263 bits (673), Expect = 8e-68
 Identities = 164/439 (37%), Positives = 229/439 (52%), Gaps = 13/439 (2%)
 Frame = +2

Query: 200  KRVTWPSDLNLCQIRLFVSEDPPSQVGLGAQDNLQVKASWLLHSTGVGVDDQLPPGFEGA 379
            +RV+W SD NLCQ+RLF+S++ PSQVGL +QD+LQ K S LLH  G G DD LPPGFEG 
Sbjct: 6    RRVSWASDFNLCQVRLFLSDESPSQVGLNSQDHLQAKTSLLLHPGGAGSDDSLPPGFEGT 65

Query: 380  HSTDQLKEEVSQMPLVKWQCPPRFVPNPHWQVVDGEESKEAEIQNQREMRVLEAIYPRTS 559
            H++ Q +  +S++P++ W  PP+ V N  WQVV GEESKE E Q++RE+RVLEAIYPR S
Sbjct: 66   HASSQFEINLSRIPVISWTRPPKIVLNLTWQVVAGEESKEVEDQHKRELRVLEAIYPRIS 125

Query: 560  AIXXXXXXXXXXXNSHFEDHQVPLIPITPIEDEDATHXXXXXXXXXXXXXXXXQQHTSPH 739
            +I           NSH  D Q+PLIPITPIED+DA                      S  
Sbjct: 126  SIPSNPAVSVDVENSHHIDGQIPLIPITPIEDDDAV-----------------ADTVSNV 168

Query: 740  SWGPPKPQSNILAAPKNASANEVSXXXXXXXXXXXXXXXXXXXXXXIMRSNEEGSLIDQX 919
            S    +P + IL    +A+   ++                      I++SNE G+LID  
Sbjct: 169  SQSLEQP-TGILKVSSSATNMHLA------GGLGSDVAAAAAALTNIVKSNERGNLIDHE 221

Query: 920  XXXXXXXXXXXXXXXVTDYGTSANN-------PRTMXXXXXXXXXXXVFHHATNAATPS- 1075
                           V DYG + N+       P +              +   ++ T S 
Sbjct: 222  LLKNILRSPEVIEKLVRDYGVTNNSQYVHNVGPSSAAFSRPPIATNQGENALLSSVTSSY 281

Query: 1076 LHPT-----LXXXXXXXXXXXGFVNMPGPAMKPPPVKDISYYKSLIQQHGGEKPESHEQA 1240
            +HPT                   V++  P ++ P  KD +YYKSLIQQHGG+K E+   +
Sbjct: 282  IHPTGGQAASVSTQWVPRPVVNSVSVASP-VEVPSKKDANYYKSLIQQHGGDKQETFPYS 340

Query: 1241 QPQFGNHQYSGTKTEQIQSSKLRESKTKNKRPCLYFNSSRGCKNGASCTFHHDMSAQQRI 1420
                   Q    + E   + + +  + K  +PC++FNSSRGC+NGA+C++ HD S QQR 
Sbjct: 341  SS--NQIQQPVNQYETAYNPRAKALRPKIMKPCIFFNSSRGCRNGANCSYQHDASFQQRG 398

Query: 1421 GSMPEVQSAKRMKVDREIT 1477
             ++  +QS+KRMK+D EI+
Sbjct: 399  STVSGIQSSKRMKLDNEIS 417


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