BLASTX nr result

ID: Cimicifuga21_contig00013088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013088
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526121.1| WD-repeat protein, putative [Ricinus communi...    61   1e-07
ref|NP_001060197.1| Os07g0600400 [Oryza sativa Japonica Group] g...    60   2e-07
ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12...    60   2e-07
emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera]    60   2e-07
ref|XP_002463148.1| hypothetical protein SORBIDRAFT_02g038500 [S...    59   5e-07

>ref|XP_002526121.1| WD-repeat protein, putative [Ricinus communis]
           gi|223534618|gb|EEF36315.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 401

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/37 (75%), Positives = 29/37 (78%)
 Frame = +3

Query: 102 EKILEIEYIKAVVPRKQEDPCLHDDWVSVVSGEIEYF 212
           EKILEIEYIKAV PRKQE+P LHDDWVS V G    F
Sbjct: 85  EKILEIEYIKAVAPRKQEEPSLHDDWVSAVDGSCPRF 121


>ref|NP_001060197.1| Os07g0600400 [Oryza sativa Japonica Group]
           gi|22775656|dbj|BAC15510.1| putative WD-repeat protein
           12 [Oryza sativa Japonica Group]
           gi|113611733|dbj|BAF22111.1| Os07g0600400 [Oryza sativa
           Japonica Group] gi|218199967|gb|EEC82394.1| hypothetical
           protein OsI_26757 [Oryza sativa Indica Group]
           gi|222637402|gb|EEE67534.1| hypothetical protein
           OsJ_25010 [Oryza sativa Japonica Group]
          Length = 436

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = +3

Query: 102 EKILEIEYIKAVVPRKQEDPCLHDDWVSVVSG 197
           E++LE+EY+KAV PRKQEDPC HDDWVS V G
Sbjct: 88  ERVLELEYVKAVAPRKQEDPCPHDDWVSAVDG 119


>ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Vitis
           vinifera] gi|296082215|emb|CBI21220.3| unnamed protein
           product [Vitis vinifera]
          Length = 438

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/32 (84%), Positives = 28/32 (87%)
 Frame = +3

Query: 102 EKILEIEYIKAVVPRKQEDPCLHDDWVSVVSG 197
           EKILEIEYIKAV PRKQE+P LHDDWVS V G
Sbjct: 89  EKILEIEYIKAVAPRKQEEPSLHDDWVSAVDG 120


>emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera]
          Length = 427

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/32 (84%), Positives = 28/32 (87%)
 Frame = +3

Query: 102 EKILEIEYIKAVVPRKQEDPCLHDDWVSVVSG 197
           EKILEIEYIKAV PRKQE+P LHDDWVS V G
Sbjct: 89  EKILEIEYIKAVAPRKQEEPSLHDDWVSAVDG 120


>ref|XP_002463148.1| hypothetical protein SORBIDRAFT_02g038500 [Sorghum bicolor]
           gi|241926525|gb|EER99669.1| hypothetical protein
           SORBIDRAFT_02g038500 [Sorghum bicolor]
          Length = 434

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 23/32 (71%), Positives = 28/32 (87%)
 Frame = +3

Query: 102 EKILEIEYIKAVVPRKQEDPCLHDDWVSVVSG 197
           E++LE+EY+KAV PRKQE+PC HDDWVS V G
Sbjct: 84  ERVLELEYVKAVAPRKQEEPCPHDDWVSAVDG 115


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