BLASTX nr result

ID: Cimicifuga21_contig00013035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013035
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545299.1| PREDICTED: protein OSB1, mitochondrial-like ...   120   9e-26
gb|EAZ27771.1| hypothetical protein OsJ_11719 [Oryza sativa Japo...   119   2e-25
gb|EAY90988.1| hypothetical protein OsI_12598 [Oryza sativa Indi...   119   2e-25
ref|XP_003545297.1| PREDICTED: protein OSB1, mitochondrial-like ...   119   3e-25
ref|XP_002327104.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25

>ref|XP_003545299.1| PREDICTED: protein OSB1, mitochondrial-like [Glycine max]
          Length = 271

 Score =  120 bits (302), Expect = 9e-26
 Identities = 53/87 (60%), Positives = 67/87 (77%)
 Frame = +2

Query: 62  VQKNLDRLYLWQVFFASPHEWWDNRNQKKHPRSPDFKHKDTGECLWLNPEDPPWVRRQLQ 241
           +QKN +RL+LWQVFF++P+EWWD R  K++P+ PDFKHKDTGE LWL+  DPPWV+RQLQ
Sbjct: 188 MQKNQNRLHLWQVFFSNPNEWWDQRKSKRNPKQPDFKHKDTGEALWLSEYDPPWVKRQLQ 247

Query: 242 RHDSRIAERGYLDPEKRSRVSMWKYDE 322
             DS+IA        +RSRV+ W YDE
Sbjct: 248 LFDSKIAGG---SAGRRSRVTNWVYDE 271


>gb|EAZ27771.1| hypothetical protein OsJ_11719 [Oryza sativa Japonica Group]
          Length = 296

 Score =  119 bits (299), Expect = 2e-25
 Identities = 55/105 (52%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2   QNNKKSVPKEGAISTSGAPDVQKN-LDRLYLWQVFFASPHEWWDNRNQKKHPRSPDFKHK 178
           QN++ S  K   +ST+     +K  +DRL LWQVFFASP+EWWDNR  K +   PDFKHK
Sbjct: 166 QNDENSSDKSSMLSTTDEILTEKKYIDRLRLWQVFFASPYEWWDNRQSKPYSYYPDFKHK 225

Query: 179 DTGECLWLNPEDPPWVRRQLQRHDSRIAERGYLDPEKRSRVSMWK 313
           DTGE LWL  +DPPWVRRQL+  D ++AE G+ D  +  +   WK
Sbjct: 226 DTGEKLWLRADDPPWVRRQLELQDQQLAENGHRDGSRTLKNHTWK 270


>gb|EAY90988.1| hypothetical protein OsI_12598 [Oryza sativa Indica Group]
          Length = 296

 Score =  119 bits (299), Expect = 2e-25
 Identities = 55/105 (52%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2   QNNKKSVPKEGAISTSGAPDVQKN-LDRLYLWQVFFASPHEWWDNRNQKKHPRSPDFKHK 178
           QN++ S  K   +ST+     +K  +DRL LWQVFFASP+EWWDNR  K +   PDFKHK
Sbjct: 166 QNDENSSDKSSMLSTTDEILTEKKYIDRLRLWQVFFASPYEWWDNRQSKPYSYYPDFKHK 225

Query: 179 DTGECLWLNPEDPPWVRRQLQRHDSRIAERGYLDPEKRSRVSMWK 313
           DTGE LWL  +DPPWVRRQL+  D ++AE G+ D  +  +   WK
Sbjct: 226 DTGEKLWLRADDPPWVRRQLELQDQQLAENGHRDGSRTLKNHTWK 270


>ref|XP_003545297.1| PREDICTED: protein OSB1, mitochondrial-like [Glycine max]
          Length = 270

 Score =  119 bits (297), Expect = 3e-25
 Identities = 52/87 (59%), Positives = 66/87 (75%)
 Frame = +2

Query: 62  VQKNLDRLYLWQVFFASPHEWWDNRNQKKHPRSPDFKHKDTGECLWLNPEDPPWVRRQLQ 241
           + KN +RL+LWQVFF++P+EWWD R  K++P+ PDFKHKDTGE LWL+  DPPWV+RQLQ
Sbjct: 187 MHKNQNRLHLWQVFFSNPNEWWDQRKSKRNPKQPDFKHKDTGEALWLSEYDPPWVKRQLQ 246

Query: 242 RHDSRIAERGYLDPEKRSRVSMWKYDE 322
             DS+IA        +RSRV+ W YDE
Sbjct: 247 LFDSKIAGG---SAGRRSRVTNWVYDE 270


>ref|XP_002327104.1| predicted protein [Populus trichocarpa] gi|222835419|gb|EEE73854.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  118 bits (296), Expect = 4e-25
 Identities = 52/86 (60%), Positives = 65/86 (75%)
 Frame = +2

Query: 65  QKNLDRLYLWQVFFASPHEWWDNRNQKKHPRSPDFKHKDTGECLWLNPEDPPWVRRQLQR 244
           +++ + LYLWQVFFASPHEWWDNR  KK+  SPDFKHKDTGE LWL+P DPPWV+RQ+Q 
Sbjct: 287 ERHKNHLYLWQVFFASPHEWWDNRKNKKNSASPDFKHKDTGEALWLSPNDPPWVKRQIQL 346

Query: 245 HDSRIAERGYLDPEKRSRVSMWKYDE 322
            D  +A + + +    SRVS W YD+
Sbjct: 347 LDLNMAVQ-HQERGAGSRVSHWVYDD 371



 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 35/68 (51%), Positives = 50/68 (73%)
 Frame = +2

Query: 62  VQKNLDRLYLWQVFFASPHEWWDNRNQKKHPRSPDFKHKDTGECLWLNPEDPPWVRRQLQ 241
           ++K+ + L LW+ FF+SPHEWWDNR  KK+ + PDFKHK +G+ LWL P+DP W++ +LQ
Sbjct: 215 MEKDKNHLCLWKAFFSSPHEWWDNRKFKKNSKLPDFKHKISGDALWLRPDDPLWIKTKLQ 274

Query: 242 RHDSRIAE 265
             D +  E
Sbjct: 275 LLDWKAGE 282


Top