BLASTX nr result

ID: Cimicifuga21_contig00013018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013018
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|2...   321   1e-85
ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1...   306   6e-81
ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max]     300   4e-79
gb|AAR15504.1| nuclear division RFT1-like protein [Arabidopsis a...   299   7e-79
gb|AAR15453.1| nuclear division RFT1-like protein [Arabidopsis a...   299   7e-79

>ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|222833933|gb|EEE72410.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  321 bits (823), Expect = 1e-85
 Identities = 158/203 (77%), Positives = 182/203 (89%)
 Frame = +1

Query: 1   ALKLVLLIGLVVMAFGPSYSYALIRVLYGSKWSDGEASTALRYYCCYVILLAMNGTSEAF 180
           ALKLVLLIG+V M FGPSYSY+LIR+LYG KWSDGEASTAL+YYC YVI+LAMNGTSEAF
Sbjct: 274 ALKLVLLIGVVFMTFGPSYSYSLIRMLYGRKWSDGEASTALQYYCFYVIVLAMNGTSEAF 333

Query: 181 LHAVATENQLKRSNDSLLIFSGIYIVLNVMLIRSAGAVGLIVANSLNMLLRIIYSAVFIQ 360
           LHAVATE+QLKRSNDSLL+FS IY+V+NV+LI+SAGAVGLI+ANSLNM+LRIIYSAVFI+
Sbjct: 334 LHAVATESQLKRSNDSLLVFSLIYVVMNVLLIKSAGAVGLILANSLNMILRIIYSAVFIK 393

Query: 361 RYFQGASSFAFRRCLPSGWAVLLFSGVATYISERIFLDRLNFWSSMSIHFSIGLIFFAIS 540
            YFQ +S+F+F  CLPSGW VLLFSGV T ISE++FLD  NFW +  IHFSIGL  F IS
Sbjct: 394 YYFQDSSAFSFTSCLPSGWTVLLFSGVITLISEKLFLDHENFWPTFLIHFSIGLTCFCIS 453

Query: 541 SIVIYRQERPFINKIIRFRDHVD 609
           S +IYR+ERPFIN+IIRFRDH+D
Sbjct: 454 SFIIYRRERPFINRIIRFRDHMD 476


>ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1 homolog [Glycine max]
          Length = 518

 Score =  306 bits (783), Expect = 6e-81
 Identities = 153/203 (75%), Positives = 175/203 (86%)
 Frame = +1

Query: 1   ALKLVLLIGLVVMAFGPSYSYALIRVLYGSKWSDGEASTALRYYCCYVILLAMNGTSEAF 180
           +LKLVLLIGLV MAFGPSYSY+LIR+LYG KWSDGEASTALR YC YVI+LAMNGTSEAF
Sbjct: 316 SLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRCYCFYVIVLAMNGTSEAF 375

Query: 181 LHAVATENQLKRSNDSLLIFSGIYIVLNVMLIRSAGAVGLIVANSLNMLLRIIYSAVFIQ 360
           +HAVATE+QLKRSNDSLL+FS IYIVLNV+LIRSAGAVGLI+ANSLNM LRI+YSA+FI+
Sbjct: 376 MHAVATESQLKRSNDSLLVFSLIYIVLNVLLIRSAGAVGLIMANSLNMTLRILYSAIFIK 435

Query: 361 RYFQGASSFAFRRCLPSGWAVLLFSGVATYISERIFLDRLNFWSSMSIHFSIGLIFFAIS 540
            YFQG+SSF+F  CLPSGW  LL SGV T ISE + LDR NF  S  +H S+GL+ F +S
Sbjct: 436 NYFQGSSSFSFYGCLPSGWIALLLSGVITLISENVLLDRDNFXPSFILHLSVGLVCFCVS 495

Query: 541 SIVIYRQERPFINKIIRFRDHVD 609
           S VIY +E+PFI +IIRF DHVD
Sbjct: 496 SYVIYCREKPFIRRIIRFNDHVD 518


>ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max]
          Length = 518

 Score =  300 bits (767), Expect = 4e-79
 Identities = 153/203 (75%), Positives = 170/203 (83%)
 Frame = +1

Query: 1   ALKLVLLIGLVVMAFGPSYSYALIRVLYGSKWSDGEASTALRYYCCYVILLAMNGTSEAF 180
           +LKLVLLIGLV MAFGPSYSY+LIR+LYG KWSDGEASTALR YC YVI+LAMNGTSEAF
Sbjct: 316 SLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRCYCFYVIVLAMNGTSEAF 375

Query: 181 LHAVATENQLKRSNDSLLIFSGIYIVLNVMLIRSAGAVGLIVANSLNMLLRIIYSAVFIQ 360
           +HAVATE QLKRSNDSLLIFS IYIVLNVMLIR AGAVGLI+ANSLNM LRI+YSA FI+
Sbjct: 376 MHAVATERQLKRSNDSLLIFSLIYIVLNVMLIRLAGAVGLILANSLNMTLRILYSATFIK 435

Query: 361 RYFQGASSFAFRRCLPSGWAVLLFSGVATYISERIFLDRLNFWSSMSIHFSIGLIFFAIS 540
            YFQG+SSF+F  CLPSGW  LL SGV T +SE + LDR NF  S   H S+GL  F +S
Sbjct: 436 NYFQGSSSFSFCGCLPSGWITLLLSGVITLVSENVLLDRDNFSLSFMFHLSVGLACFCVS 495

Query: 541 SIVIYRQERPFINKIIRFRDHVD 609
           S VIY +E+PFI +IIRF DHVD
Sbjct: 496 SYVIYCREKPFIRRIIRFNDHVD 518


>gb|AAR15504.1| nuclear division RFT1-like protein [Arabidopsis arenosa]
          Length = 478

 Score =  299 bits (765), Expect = 7e-79
 Identities = 141/201 (70%), Positives = 171/201 (85%)
 Frame = +1

Query: 1   ALKLVLLIGLVVMAFGPSYSYALIRVLYGSKWSDGEASTALRYYCCYVILLAMNGTSEAF 180
           ALKLV+LIGL+ MAFGPSYSY+LIR+LYG KWSDGEAS AL++YC Y+I+LAMNGTSEAF
Sbjct: 274 ALKLVILIGLIFMAFGPSYSYSLIRLLYGEKWSDGEASLALQFYCLYIIVLAMNGTSEAF 333

Query: 181 LHAVATENQLKRSNDSLLIFSGIYIVLNVMLIRSAGAVGLIVANSLNMLLRIIYSAVFIQ 360
           LHAV TEN+LKRSND LL+FS IY+ LN++LIRSAGA+GLI+ANSLNM+ RIIYS  FIQ
Sbjct: 334 LHAVGTENELKRSNDMLLVFSLIYVTLNILLIRSAGAIGLIMANSLNMIFRIIYSGKFIQ 393

Query: 361 RYFQGASSFAFRRCLPSGWAVLLFSGVATYISERIFLDRLNFWSSMSIHFSIGLIFFAIS 540
           RYFQG SSF+FR+C P GW +L+ S + T ISE+  LDR NFW +  +HF+IG I F +S
Sbjct: 394 RYFQGTSSFSFRKCFPLGWQILILSSIITLISEKTILDRKNFWETFPLHFAIGFICFCLS 453

Query: 541 SIVIYRQERPFINKIIRFRDH 603
           +IVIYR+ER FI +IIRFRD+
Sbjct: 454 AIVIYRRERVFIKRIIRFRDY 474


>gb|AAR15453.1| nuclear division RFT1-like protein [Arabidopsis arenosa]
          Length = 478

 Score =  299 bits (765), Expect = 7e-79
 Identities = 141/201 (70%), Positives = 171/201 (85%)
 Frame = +1

Query: 1   ALKLVLLIGLVVMAFGPSYSYALIRVLYGSKWSDGEASTALRYYCCYVILLAMNGTSEAF 180
           ALKLV+LIGL+ MAFGPSYSY+LIR+LYG KWSDGEAS AL++YC Y+I+LAMNGTSEAF
Sbjct: 274 ALKLVILIGLIFMAFGPSYSYSLIRLLYGEKWSDGEASLALQFYCLYIIVLAMNGTSEAF 333

Query: 181 LHAVATENQLKRSNDSLLIFSGIYIVLNVMLIRSAGAVGLIVANSLNMLLRIIYSAVFIQ 360
           LHAV TEN+LKRSND LL+FS IY+ LN++LIRSAGA+GLI+ANSLNM+ RIIYS  FIQ
Sbjct: 334 LHAVGTENELKRSNDMLLVFSLIYVTLNILLIRSAGAIGLIMANSLNMIFRIIYSGKFIQ 393

Query: 361 RYFQGASSFAFRRCLPSGWAVLLFSGVATYISERIFLDRLNFWSSMSIHFSIGLIFFAIS 540
           RYFQG SSF+FR+C P GW +L+ S + T ISE+  LDR NFW +  +HF+IG I F +S
Sbjct: 394 RYFQGTSSFSFRKCFPLGWQILILSSIITLISEKTILDRKNFWETFPLHFAIGFICFCLS 453

Query: 541 SIVIYRQERPFINKIIRFRDH 603
           +IVIYR+ER FI +IIRFRD+
Sbjct: 454 AIVIYRRERVFIKRIIRFRDY 474


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