BLASTX nr result

ID: Cimicifuga21_contig00012323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012323
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32919.3| unnamed protein product [Vitis vinifera]               59   5e-07
dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare]     55   8e-07
emb|CBI32913.3| unnamed protein product [Vitis vinifera]               57   1e-06
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    57   1e-06
ref|XP_003625386.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    55   6e-06

>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/60 (43%), Positives = 39/60 (65%)
 Frame = +1

Query: 67  LPGSLVHDILSFLPIKDAVGDSILSTRWKYMWTSVHILEFDEGGIVDKDPVYKDEIPKFC 246
           LP +++  I+SFLP K AVG S+LS RW+Y+W S+  L+FD+  ++D+D    D     C
Sbjct: 15  LPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPIGDSERSIC 74


>dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 384

 Score = 54.7 bits (130), Expect(2) = 8e-07
 Identities = 26/70 (37%), Positives = 38/70 (54%)
 Frame = +1

Query: 1   PCGHGKM*CVPIERCGVCQCEILPGSLVHDILSFLPIKDAVGDSILSTRWKYMWTSVHIL 180
           PCG     C    R GV +   LP  L+H ++SFLP+ + V  S+LS RW+++W S   +
Sbjct: 8   PCGSKSARC---SRNGVDRLSSLPDDLLHHVMSFLPMPEVVRTSLLSPRWRFVWRSTPFI 64

Query: 181 EFDEGGIVDK 210
             D    +DK
Sbjct: 65  RIDGAEFMDK 74



 Score = 23.1 bits (48), Expect(2) = 8e-07
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 224 KMKFLNFVDRVLTLHDESVKI 286
           K K  NFVD +L LHD +  +
Sbjct: 74  KSKLENFVDCLLLLHDYTASL 94


>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +1

Query: 67  LPGSLVHDILSFLPIKDAVGDSILSTRWKYMWTSVHILEFDE 192
           LP  L+  ILSFLP K AVG SILS RW+Y+W SV IL+FD+
Sbjct: 15  LPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDD 56


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +1

Query: 67  LPGSLVHDILSFLPIKDAVGDSILSTRWKYMWTSVHILEFDE 192
           LP  L+  ILSFLP K AVG SILS RW+Y+W SV IL+FD+
Sbjct: 15  LPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDD 56


>ref|XP_003625386.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500401|gb|AES81604.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 485

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/49 (53%), Positives = 33/49 (67%)
 Frame = +1

Query: 67  LPGSLVHDILSFLPIKDAVGDSILSTRWKYMWTSVHILEFDEGGIVDKD 213
           LP S++ +IL FLP K  V  S+LS RWK++W SV  L+FD GGI   D
Sbjct: 25  LPDSILFEILYFLPTKLVVTTSVLSKRWKHVWLSVLALDFDSGGIETSD 73


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