BLASTX nr result
ID: Cimicifuga21_contig00012323
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00012323 (335 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI32919.3| unnamed protein product [Vitis vinifera] 59 5e-07 dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare] 55 8e-07 emb|CBI32913.3| unnamed protein product [Vitis vinifera] 57 1e-06 emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 57 1e-06 ref|XP_003625386.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 55 6e-06 >emb|CBI32919.3| unnamed protein product [Vitis vinifera] Length = 411 Score = 58.5 bits (140), Expect = 5e-07 Identities = 26/60 (43%), Positives = 39/60 (65%) Frame = +1 Query: 67 LPGSLVHDILSFLPIKDAVGDSILSTRWKYMWTSVHILEFDEGGIVDKDPVYKDEIPKFC 246 LP +++ I+SFLP K AVG S+LS RW+Y+W S+ L+FD+ ++D+D D C Sbjct: 15 LPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPIGDSERSIC 74 >dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 384 Score = 54.7 bits (130), Expect(2) = 8e-07 Identities = 26/70 (37%), Positives = 38/70 (54%) Frame = +1 Query: 1 PCGHGKM*CVPIERCGVCQCEILPGSLVHDILSFLPIKDAVGDSILSTRWKYMWTSVHIL 180 PCG C R GV + LP L+H ++SFLP+ + V S+LS RW+++W S + Sbjct: 8 PCGSKSARC---SRNGVDRLSSLPDDLLHHVMSFLPMPEVVRTSLLSPRWRFVWRSTPFI 64 Query: 181 EFDEGGIVDK 210 D +DK Sbjct: 65 RIDGAEFMDK 74 Score = 23.1 bits (48), Expect(2) = 8e-07 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +2 Query: 224 KMKFLNFVDRVLTLHDESVKI 286 K K NFVD +L LHD + + Sbjct: 74 KSKLENFVDCLLLLHDYTASL 94 >emb|CBI32913.3| unnamed protein product [Vitis vinifera] Length = 348 Score = 57.4 bits (137), Expect = 1e-06 Identities = 27/42 (64%), Positives = 32/42 (76%) Frame = +1 Query: 67 LPGSLVHDILSFLPIKDAVGDSILSTRWKYMWTSVHILEFDE 192 LP L+ ILSFLP K AVG SILS RW+Y+W SV IL+FD+ Sbjct: 15 LPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDD 56 >emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] Length = 607 Score = 57.4 bits (137), Expect = 1e-06 Identities = 27/42 (64%), Positives = 32/42 (76%) Frame = +1 Query: 67 LPGSLVHDILSFLPIKDAVGDSILSTRWKYMWTSVHILEFDE 192 LP L+ ILSFLP K AVG SILS RW+Y+W SV IL+FD+ Sbjct: 15 LPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDD 56 >ref|XP_003625386.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355500401|gb|AES81604.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 485 Score = 55.1 bits (131), Expect = 6e-06 Identities = 26/49 (53%), Positives = 33/49 (67%) Frame = +1 Query: 67 LPGSLVHDILSFLPIKDAVGDSILSTRWKYMWTSVHILEFDEGGIVDKD 213 LP S++ +IL FLP K V S+LS RWK++W SV L+FD GGI D Sbjct: 25 LPDSILFEILYFLPTKLVVTTSVLSKRWKHVWLSVLALDFDSGGIETSD 73