BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012266
         (1271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   155   2e-35
ref|NP_191479.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...   141   4e-31
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...   138   3e-30
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...   135   3e-29
emb|CBI32919.3| unnamed protein product [Vitis vinifera]              132   2e-28

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  155 bits (393), Expect = 2e-35
 Identities = 133/378 (35%), Positives = 184/378 (48%), Gaps = 21/378 (5%)
 Frame = +1

Query: 178  YILGNDRISRLPNTVLHYILSFLPTKQVIATSTLSTRWRHLWTSAPNLDFKYERGNNPPS 357
            Y    D IS LP+ +L +ILSFLPTK  + TS LS RWR+LW S P LDF  E   NP +
Sbjct: 5    YEESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPST 64

Query: 358  LV-LGRR---FVNIVDRVLNIHKLSNLRKFSLECDQDCDKSRVNAWITTVTRHRVEELNL 525
            LV L  R   F N VD VL   ++S ++KF L   +D +   V +WI      RV+EL+L
Sbjct: 65   LVELEERIIMFQNFVDGVLRHSEVSCIKKFRLGY-RDNNLDSVYSWICIALERRVQELDL 123

Query: 526  AIFIKPASVLPDCLFTCESLEVLILLKTGLLELPYVIXXXXXXXXXXXXXXXXDEYLTEK 705
             + I     LP   F C++L V+ L     L++P  +                D+   +K
Sbjct: 124  HLLIDWRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQK 183

Query: 706  LFSSCPVLEELIIKTCSWVNLKEFSISVNTLKCLVIDNIDFFAETDGL--------HQCI 861
            L S CPVLEEL+I+     N    ++S  +LK L I     F  TDG             
Sbjct: 184  LLSGCPVLEELVIEREERDNQWVVNVSNPSLKILRI-----FFFTDGFAHPYEQEDQDYK 238

Query: 862  IKVDAPKLLSFFWRSEYLPKEFILPDISSLVSANITIEDCDRRREQKE----VSY--CLY 1023
            + VDAP  L +   ++YL K++ + D+ SLV A I +E      E+      +SY   +Y
Sbjct: 239  VVVDAPN-LEYLSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIY 297

Query: 1024 WLLGALSRVKVLKMSSTVFKILSEVEDIFAILPSFNNLIHLEMSTIFLSLARTS---LFH 1194
             LLG +S VK L ++      LS     +  LP+F+N+  LE    FL +   +   L +
Sbjct: 298  ELLGRISNVKCLSLTGVTLDSLSGTIGDYK-LPTFHNMTRLE----FLFIGGFNWDFLPN 352

Query: 1195 LLQISPYLEKLVFAEGCT 1248
             L  SP LE LV   G T
Sbjct: 353  FLHSSPNLEALVIETGYT 370


>ref|NP_191479.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
            gi|75264308|sp|Q9LX51.1|FBL64_ARATH RecName:
            Full=F-box/LRR-repeat protein At3g59200
            gi|7801670|emb|CAB91590.1| putative protein [Arabidopsis
            thaliana] gi|26450835|dbj|BAC42525.1| unknown protein
            [Arabidopsis thaliana] gi|29028916|gb|AAO64837.1|
            At3g59200 [Arabidopsis thaliana]
            gi|332646367|gb|AEE79888.1| F-box/LRR-repeat protein
            [Arabidopsis thaliana]
          Length = 520

 Score =  141 bits (355), Expect = 4e-31
 Identities = 122/375 (32%), Positives = 178/375 (47%), Gaps = 26/375 (6%)
 Frame = +1

Query: 184  LGNDRISRLPNTVLHYILSFLPTKQVIATSTLSTRWRHLWTSAPNLDF---KYERGNNPP 354
            +  DRIS LPN V+ +ILSFLPTK+  +TS LS +WR+L+    NLDF    Y+ G    
Sbjct: 4    VSRDRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKS 63

Query: 355  SLVLGRRFVNIVDRVLNIHKLSNLRKFSLEC-DQDCDKSRVNAWITTVTRHRVEELNLAI 531
             + L R F+  VDRVL +    ++ KFSLEC + D D +RV  WI  V    V EL+L+I
Sbjct: 64   DVELSRSFMEFVDRVLALQGNGSVNKFSLECSNYDVDLARVTGWILNVLGRGVSELDLSI 123

Query: 532  FIKPASVLPDCLFTCESLEVLILLKTG-------LLELPYVIXXXXXXXXXXXXXXXXDE 690
               P   LP  +F  ++   L+ LK G        L+   V                   
Sbjct: 124  LEYP---LPSEIFVSKT---LVRLKLGPANDLTLTLDRKDVFLPKLKTLYIDCVDVQERG 177

Query: 691  YLTEKLFSSCPVLEELIIKTCSWVNLKEFSISVNTLKCLVIDNIDFFAETDGLHQCIIKV 870
            +   KL S CPVLEEL++    W N K  S+SV TLK      + FF E    +   +  
Sbjct: 178  FGFVKLLSGCPVLEELVLMNIGWENWKFCSVSVKTLK-----RLTFFCEETYENPKSVSF 232

Query: 871  DAPKLLSFFWRSEYLPKEFILPDISSLVSANITIE-------DCD--------RRREQKE 1005
            D P L+ +   S+ +  ++   + +SLV A+I +        D D           E+K+
Sbjct: 233  DTPNLV-YLEYSDAIASKYPKVNFNSLVEAHIGLRLTEDQSGDADFSEEDYFSEGDEKKQ 291

Query: 1006 VSYCLYWLLGALSRVKVLKMSSTVFKILSEVEDIFAILPSFNNLIHLEMSTIFLSLARTS 1185
            +       L  +S V++L +S+   ++L+   +    +P FNNLI L +      +   S
Sbjct: 292  MVGNATDFLKGISTVQILYLSAQAIEVLTFCCE---PIPVFNNLIQLTIEN-NSEIRWDS 347

Query: 1186 LFHLLQISPYLEKLV 1230
            L  LL+  P LE LV
Sbjct: 348  LPGLLKNCPNLETLV 362


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
            predicted protein [Populus trichocarpa]
          Length = 460

 Score =  138 bits (348), Expect = 3e-30
 Identities = 112/350 (32%), Positives = 167/350 (47%), Gaps = 1/350 (0%)
 Frame = +1

Query: 187  GNDRISRLPNTVLHYILSFLPTKQVIATSTLSTRWRHLWTSAPNLDFKYERGNNPPSLVL 366
            G   I  LP+ +L +ILSFL T+  + TS LS +W HLW S  NL F    G   P   L
Sbjct: 24   GEKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTF---FGLKSPKRKL 80

Query: 367  GRRFVNIVDRVLNIHKLSNLRKFSLECDQDCDKSRVNAWITTVTRHRVEELNLAIFIKPA 546
               F++ VDRVL +   SN+ +F L C+   D SRV  WI+      V++L L +    A
Sbjct: 81   ---FMDFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTWISAAVNRNVKDLYLELRDFEA 137

Query: 547  S-VLPDCLFTCESLEVLILLKTGLLELPYVIXXXXXXXXXXXXXXXXDEYLTEKLFSSCP 723
            S VLP CLF CE+L  L +    +L+LP  I                D++ T++LF S P
Sbjct: 138  SFVLPHCLFNCETLTELEINMPYILKLPSSISLSCLKILNLYEVIFTDDHSTQQLF-SLP 196

Query: 724  VLEELIIKTCSWVNLKEFSISVNTLKCLVIDNIDFFAETDGLHQCIIKVDAPKLLSFFWR 903
             L EL I  C+W+NL   SIS   L+ L I      +    L  C +++    L  F   
Sbjct: 197  NLVELEIHECNWMNLVAVSISAPKLQSLDIHE-PCQSSPASLGGCHVRIFGTHLADFTII 255

Query: 904  SEYLPKEFILPDISSLVSANITIEDCDRRREQKEVSYCLYWLLGALSRVKVLKMSSTVFK 1083
               L  ++ L + SS+V   I+I       + ++ +Y    LL  +S  + L +++ V  
Sbjct: 256  GT-LSNDYCLYE-SSVVETCISI--FSAADKPRQTAYRASKLLEGISSAQSLCLTTNVVD 311

Query: 1084 ILSEVEDIFAILPSFNNLIHLEMSTIFLSLARTSLFHLLQISPYLEKLVF 1233
            +L +  ++ A    F NL  L   +   +L     +H++  SP+L  L F
Sbjct: 312  VLDDAPELLAFPLEFRNLTSLLFESEESNLHSDGFWHIIYNSPHLIALQF 361


>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 467

 Score =  135 bits (339), Expect = 3e-29
 Identities = 109/368 (29%), Positives = 182/368 (49%), Gaps = 11/368 (2%)
 Frame = +1

Query: 193  DRISRLPNTVLHYILSFLPTKQVIATSTLSTRWRHLWTSAPNLDFK---YERGNNPPSLV 363
            D IS LP  +L+YILS L T++ + TS L+T+WR+LWT  P  DF+    +R +  P  +
Sbjct: 23   DMISDLPEGILYYILSRLSTEEAVRTSILATKWRYLWTQLPVFDFRDSSPKRNSKSPDCL 82

Query: 364  LGRRFVNIVDRVLNIHKLSNLRKFSLECDQD-CDKSRVNAWITTVTRHRVEELNLAIFIK 540
                 V++VD++L  HK + ++K  +E      D  +V++ +++   H V +L L +  +
Sbjct: 83   -----VDLVDQLL--HKSNRIKKLFIELPVTIVDAGKVSSMLSSALMHDVHDLTLNLESE 135

Query: 541  PAS-VLPDCLFTCESLEVLILLKTGLLELPYVIXXXXXXXXXXXXXXXXDEYLTEKLFSS 717
             +  VLP+      SL  L ++   L  +P  I                +E   ++LFS 
Sbjct: 136  NSRFVLPNSFSASRSLTKLDIVFGFLDSVPDGICFPSLKILSFAHVTFTNEKSAQRLFSG 195

Query: 718  CPVLEELIIKTCSWVNLKEFSISVNTLKCLVIDNIDFFAETDGL--HQCIIKVDAPKLLS 891
            CPVL++L  + C WVN+   S+++ TLK      +D F  +  L  + C+ K+DA  LLS
Sbjct: 196  CPVLQDLSFEKCYWVNI-NISVAIPTLK-----KLDIFFRSSSLDRNSCMFKIDAVNLLS 249

Query: 892  FFWRSEYLPKEFILPDISSLVSANITIEDCDRRREQKEVSYCLYWLLGALSRVKVLKMSS 1071
              ++S      F++ + +S+V ANI +     +  +  V+     L   L  V+ L++S 
Sbjct: 250  LSYKSNPTINCFLV-NSTSIVDANIDLGFFCVQNNELHVAVFAIELFSRLGSVESLRLSD 308

Query: 1072 TVFKILSEVEDIFAILPSFNNLIHLEMSTIFLSLARTSLFHLLQISPYLEKL----VFAE 1239
               + L+  +    +LPSF NL  LE+   F   +   L  +L+ SP LE L    V   
Sbjct: 309  QTIQCLNYAKSALHLLPSFKNLTRLEVH--FDDPSCEVLADILRKSPKLEFLHIYGVHLV 366

Query: 1240 GCTPYGDG 1263
             C+ +  G
Sbjct: 367  SCSRFSSG 374


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score =  132 bits (331), Expect = 2e-28
 Identities = 114/362 (31%), Positives = 170/362 (46%), Gaps = 10/362 (2%)
 Frame = +1

Query: 175  TYILGNDRISRLPNTVLHYILSFLPTKQVIATSTLSTRWRHLWTSAPNLDFKYER----- 339
            TY    DRIS LP+ VL +I+SFLPTK  + TS LS RWR+LW S PNLDF  +      
Sbjct: 4    TYGKSRDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRD 63

Query: 340  ---GNNPPSLVLGRRFVNIVDRVLNIHKLSNLRKFSLECDQDCDKSRVNAWITTVTRHRV 510
               G++  S+     F N VD+VL    +S +RKF L+C      S VN+WI T     V
Sbjct: 64   KPIGDSERSIC----FKNFVDKVLLHGSISCIRKFRLKCSDHELDSAVNSWICTALERNV 119

Query: 511  EELNLAIFIKPASVLPDCLFTCESLEVLILLKTGLLELPYVIXXXXXXXXXXXXXXXXDE 690
            +EL+L    +    LP   F C++L VL L                              
Sbjct: 120  QELDLYFDTEYPIELPPKFFFCKTLVVLKL------------------------------ 149

Query: 691  YLTEKLFSSCPVLEELIIKTCSWVNLKEFSISVNTLKCLVIDNIDFFAETDGLHQCIIKV 870
                     CPVLEEL+I+         F++S  TLK L I    +F++        + V
Sbjct: 150  ---------CPVLEELVIERWRLDEQWVFNVSAPTLKSLAI----YFSKYK------LVV 190

Query: 871  DAPKLLSFFWRSEYLPKEFILPDISSLVSANITIEDCDRRREQKEVSY--CLYWLLGALS 1044
            DAP  L +   ++++ +++++ ++SSLV A + +    R  +  ++ Y   +Y LL  +S
Sbjct: 191  DAPN-LEYLSITDFVSEDYLMSNLSSLVKAYVNVGPTIRGIDD-QILYRGRIYELLRGIS 248

Query: 1045 RVKVLKMSSTVFKILSEVEDIFAILPSFNNLIHLEMSTIFLSLARTSLFHLLQISPYLEK 1224
             VK L +S      LS +   +  LP+F+++  LE+   +       L   L  SP LE 
Sbjct: 249  NVKHLSLSGETLHSLSGMFCGYE-LPAFHSVTRLELEVDY-GYGLEFLKEFLDTSPNLEI 306

Query: 1225 LV 1230
            L+
Sbjct: 307  LI 308