BLASTX nr result

ID: Cimicifuga21_contig00011551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011551
         (959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30821.3| unnamed protein product [Vitis vinifera]              268   2e-69
ref|XP_002277175.1| PREDICTED: coatomer subunit zeta-2 [Vitis vi...   267   2e-69
ref|XP_002273766.1| PREDICTED: coatomer subunit zeta-1-like isof...   266   5e-69
ref|NP_001233898.1| nonclathrin coat protein zeta1-COP [Solanum ...   266   5e-69
ref|NP_001233904.1| nonclathrin coat protein zeta2-COP [Solanum ...   262   8e-68

>emb|CBI30821.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score =  268 bits (684), Expect = 2e-69
 Identities = 136/172 (79%), Positives = 148/172 (86%)
 Frame = +3

Query: 81  STMGSCPFIKSILLLDSEGKRVAVKYYSDDWATLNAKLAFEKSVFTKTQKTNARTEAEIS 260
           S M SCP +K+ILLLDSEGKRVAVKYY DDW T NAK  FEKSVF+KTQKTNARTEAEI+
Sbjct: 22  SNMESCPSVKNILLLDSEGKRVAVKYYCDDWPTNNAKETFEKSVFSKTQKTNARTEAEIA 81

Query: 261 MFENNIVVYKFIQDLHFFVTGGDDENELILATVLQGFYDAVALLLRGNVDKREAXXXXXX 440
           MFENNIVVYKF+QDLHFFVTGG+DENELILATVLQGF+DAV LLLRGNVDK+EA      
Sbjct: 82  MFENNIVVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEALENLDL 141

Query: 441 XXXXXXXXVDGGMVLETDSNVIAGKVASHSVDSSAPLSEQTISQALATAREH 596
                   +DGG+VLETD+NVIAGKVASHS+DS APLSEQTISQALATAREH
Sbjct: 142 ILLCLDEIIDGGIVLETDANVIAGKVASHSLDSGAPLSEQTISQALATAREH 193


>ref|XP_002277175.1| PREDICTED: coatomer subunit zeta-2 [Vitis vinifera]
           gi|297743043|emb|CBI35910.3| unnamed protein product
           [Vitis vinifera]
          Length = 183

 Score =  267 bits (683), Expect = 2e-69
 Identities = 135/172 (78%), Positives = 149/172 (86%)
 Frame = +3

Query: 81  STMGSCPFIKSILLLDSEGKRVAVKYYSDDWATLNAKLAFEKSVFTKTQKTNARTEAEIS 260
           ST G+CP IK+ILLLDSEGKRVAVKYYSDDW T  AKLAFEKSVFTKTQKTNARTEAEI+
Sbjct: 5   STHGACPSIKNILLLDSEGKRVAVKYYSDDWPTNAAKLAFEKSVFTKTQKTNARTEAEIA 64

Query: 261 MFENNIVVYKFIQDLHFFVTGGDDENELILATVLQGFYDAVALLLRGNVDKREAXXXXXX 440
           MFENN+V+YKFIQDLHFFVTGGDDENELILATVLQGF DAVALLLR N+DKREA      
Sbjct: 65  MFENNVVIYKFIQDLHFFVTGGDDENELILATVLQGFSDAVALLLRNNIDKREALENLDL 124

Query: 441 XXXXXXXXVDGGMVLETDSNVIAGKVASHSVDSSAPLSEQTISQALATAREH 596
                   VDGGM+LETD++VI GKVA+HS+D+ APLSEQT++QALATAREH
Sbjct: 125 ILLCLDEIVDGGMILETDASVIEGKVAAHSIDAGAPLSEQTLTQALATAREH 176


>ref|XP_002273766.1| PREDICTED: coatomer subunit zeta-1-like isoform 1 [Vitis vinifera]
          Length = 177

 Score =  266 bits (680), Expect = 5e-69
 Identities = 135/170 (79%), Positives = 147/170 (86%)
 Frame = +3

Query: 87  MGSCPFIKSILLLDSEGKRVAVKYYSDDWATLNAKLAFEKSVFTKTQKTNARTEAEISMF 266
           M SCP +K+ILLLDSEGKRVAVKYY DDW T NAK  FEKSVF+KTQKTNARTEAEI+MF
Sbjct: 1   MESCPSVKNILLLDSEGKRVAVKYYCDDWPTNNAKETFEKSVFSKTQKTNARTEAEIAMF 60

Query: 267 ENNIVVYKFIQDLHFFVTGGDDENELILATVLQGFYDAVALLLRGNVDKREAXXXXXXXX 446
           ENNIVVYKF+QDLHFFVTGG+DENELILATVLQGF+DAV LLLRGNVDK+EA        
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEALENLDLIL 120

Query: 447 XXXXXXVDGGMVLETDSNVIAGKVASHSVDSSAPLSEQTISQALATAREH 596
                 +DGG+VLETD+NVIAGKVASHS+DS APLSEQTISQALATAREH
Sbjct: 121 LCLDEIIDGGIVLETDANVIAGKVASHSLDSGAPLSEQTISQALATAREH 170


>ref|NP_001233898.1| nonclathrin coat protein zeta1-COP [Solanum lycopersicum]
           gi|7259352|dbj|BAA92781.1| nonclathrin coat protein
           zeta1-COP [Solanum lycopersicum]
          Length = 184

 Score =  266 bits (680), Expect = 5e-69
 Identities = 132/168 (78%), Positives = 145/168 (86%)
 Frame = +3

Query: 93  SCPFIKSILLLDSEGKRVAVKYYSDDWATLNAKLAFEKSVFTKTQKTNARTEAEISMFEN 272
           SCP +K+ILLLDSEGKRVAVKYYSDDW T NAK+AFEKS+FTKTQKTNARTEAEI+MFEN
Sbjct: 10  SCPVVKNILLLDSEGKRVAVKYYSDDWPTNNAKVAFEKSIFTKTQKTNARTEAEITMFEN 69

Query: 273 NIVVYKFIQDLHFFVTGGDDENELILATVLQGFYDAVALLLRGNVDKREAXXXXXXXXXX 452
           NI+VYKF+QDLHFFVTGGDDENEL+LATVLQGFYDAV LLLR NVD+REA          
Sbjct: 70  NIIVYKFVQDLHFFVTGGDDENELVLATVLQGFYDAVTLLLRNNVDQREALENLDLILLC 129

Query: 453 XXXXVDGGMVLETDSNVIAGKVASHSVDSSAPLSEQTISQALATAREH 596
               VDGGMVLETD N IAGKV+SH++D  APLSEQTI+QALATAREH
Sbjct: 130 LDEIVDGGMVLETDGNTIAGKVSSHNMDDGAPLSEQTITQALATAREH 177


>ref|NP_001233904.1| nonclathrin coat protein zeta2-COP [Solanum lycopersicum]
           gi|7259354|dbj|BAA92782.1| nonclathrin coat protein
           zeta2-COP [Solanum lycopersicum]
          Length = 183

 Score =  262 bits (670), Expect = 8e-68
 Identities = 130/169 (76%), Positives = 146/169 (86%)
 Frame = +3

Query: 90  GSCPFIKSILLLDSEGKRVAVKYYSDDWATLNAKLAFEKSVFTKTQKTNARTEAEISMFE 269
           GSCP +K+ILLLDSEGKRVAVKYY DDW T +AKLAFEKS+FTKTQKTNARTEAEI+MF+
Sbjct: 8   GSCPVVKNILLLDSEGKRVAVKYYCDDWPTYSAKLAFEKSIFTKTQKTNARTEAEIAMFD 67

Query: 270 NNIVVYKFIQDLHFFVTGGDDENELILATVLQGFYDAVALLLRGNVDKREAXXXXXXXXX 449
           +NIVVYKF+QDLHFFVTGGDDENELILATVLQGFYDAV LLLR NV++REA         
Sbjct: 68  SNIVVYKFVQDLHFFVTGGDDENELILATVLQGFYDAVTLLLRSNVEQREALENLDLILL 127

Query: 450 XXXXXVDGGMVLETDSNVIAGKVASHSVDSSAPLSEQTISQALATAREH 596
                VDGGM+LETD +VIAGKVASH++D  +P+SEQTISQALATAREH
Sbjct: 128 CLDEIVDGGMILETDGSVIAGKVASHNMDDGSPISEQTISQALATAREH 176


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