BLASTX nr result

ID: Cimicifuga21_contig00011397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011397
         (1499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263423.1| PREDICTED: F-box protein At2g32560-like [Vit...   560   e-157
ref|XP_004140188.1| PREDICTED: F-box protein At2g32560-like isof...   553   e-155
ref|XP_002314008.1| predicted protein [Populus trichocarpa] gi|2...   544   e-152
ref|XP_003545428.1| PREDICTED: F-box protein At2g32560-like [Gly...   537   e-150
emb|CBI24276.3| unnamed protein product [Vitis vinifera]              535   e-149

>ref|XP_002263423.1| PREDICTED: F-box protein At2g32560-like [Vitis vinifera]
          Length = 396

 Score =  560 bits (1444), Expect = e-157
 Identities = 254/371 (68%), Positives = 300/371 (80%), Gaps = 2/371 (0%)
 Frame = +2

Query: 110  WVNEIRLLS-VWFWKELSCFSVLWLKKNNLSGSLSDIPARMSFKKRSLSAKVENVDETDE 286
            WV+EIRL S +WFWKELS F++    KN+L G    IP++MSF +++   KVENV+   E
Sbjct: 26   WVSEIRLSSSLWFWKELSFFTIYRSIKNSLFGGFWGIPSKMSFTEKTPLHKVENVEVGLE 85

Query: 287  MSVLDLPELTLECILGMLPPSSLCNMAGVCSSLRERCRSDHLWERHMKEKWGRVIGKAAY 466
            M +LDLPEL LECIL  LPP  LC++ GVCSSLR+RC SD+ W+RHMKEKWGR++G+AAY
Sbjct: 86   MGLLDLPELVLECILERLPPEGLCSLGGVCSSLRDRCMSDYFWKRHMKEKWGRILGRAAY 145

Query: 467  KEWQCHIATKKDY-AFNQSMHRGFVPTLSSVWPLSWIRSKLDNHSNPASSLPADSIKSWY 643
            +EWQ H+A++KD     Q    G +  LS   PLSWIRS+L N +   SS+P DSI SWY
Sbjct: 146  REWQWHMASRKDSDTLEQGKPNGLMRLLSRFGPLSWIRSRLSNSTPQRSSVPVDSIMSWY 205

Query: 644  LAFESGKFWFPAQVYNREHGHVGFMLSCYDAELSYDRHTDTFHARYPPHGRRTIVIEERV 823
            LA E+G+FWFPAQVYNRE GHVGFMLSCYDAELSYD HTDTF ARYPPHGRRT+ IE  V
Sbjct: 206  LALETGRFWFPAQVYNRESGHVGFMLSCYDAELSYDSHTDTFQARYPPHGRRTVAIENGV 265

Query: 824  EWDRLRPPPVDTPPHDLHLSDCLNDLRPGDHIEIQWRRNKEFPYGWWYGVVGHLESCDRN 1003
             WDRLR PPV+TPPHDLH+SDCLN+L PGDHIEIQWRRNKEFPYGWWYG+VGHLESCD N
Sbjct: 266  SWDRLRAPPVETPPHDLHMSDCLNELHPGDHIEIQWRRNKEFPYGWWYGIVGHLESCDGN 325

Query: 1004 KNFCRCHTSDTLVLEFNQYAPGSRWRETIINRNNHREEGNEADGFYGGIRKIYSTEEIAM 1183
            +++CRCH S+T+VLEFNQY PGSRWR T INR +HREEGNEADGFYGGIRK+   +EI++
Sbjct: 326  ESYCRCHNSETVVLEFNQYTPGSRWRRTSINRKDHREEGNEADGFYGGIRKLCRNDEISV 385

Query: 1184 WKRLWPKEVLE 1216
            WK+LWP EVLE
Sbjct: 386  WKQLWPAEVLE 396


>ref|XP_004140188.1| PREDICTED: F-box protein At2g32560-like isoform 1 [Cucumis sativus]
          Length = 396

 Score =  553 bits (1425), Expect = e-155
 Identities = 253/371 (68%), Positives = 301/371 (81%), Gaps = 2/371 (0%)
 Frame = +2

Query: 110  WVNEIRLLSVWFWKELSCFSVLWLKKNNLSGSLSDIPARMSFKKRSLSAKVENVDETDEM 289
            W +E+R LS WFWKELS F +  + KN+L      I ++MSFKK+ LS KVENV+E+ EM
Sbjct: 27   WADEMRFLSHWFWKELSFFPIYKVIKNSLCTYTFCISSKMSFKKKYLS-KVENVEESGEM 85

Query: 290  SVLDLPELTLECILGMLPPSSLCNMAGVCSSLRERCRSDHLWERHMKEKWGRVIGKAAYK 469
            SVLDLPEL LECIL  LPP +LC+MAGVCSSLRERC SDHLWE+HMK KWG+VIG+AAY+
Sbjct: 86   SVLDLPELALECILEKLPPDALCSMAGVCSSLRERCISDHLWEKHMKRKWGKVIGQAAYR 145

Query: 470  EWQCHIATKKDYA-FNQSMHRGFVPTLSSVWPLSWIRSKLDNHSN-PASSLPADSIKSWY 643
            EWQ H+A++   +   Q+  +  +   S  W LSWIRSK++ +SN P + LP DSI +WY
Sbjct: 146  EWQWHLASRAGESNLKQNKQKSLIRLFSFGWSLSWIRSKVNENSNTPRTFLPVDSIMAWY 205

Query: 644  LAFESGKFWFPAQVYNREHGHVGFMLSCYDAELSYDRHTDTFHARYPPHGRRTIVIEERV 823
            LA E+G+FWFPAQVYNRE+GHVGFMLSCYDAEL YD  TDTF ARYPPHGRR I IE  V
Sbjct: 206  LALETGRFWFPAQVYNRENGHVGFMLSCYDAELCYDLRTDTFQARYPPHGRRAIAIENGV 265

Query: 824  EWDRLRPPPVDTPPHDLHLSDCLNDLRPGDHIEIQWRRNKEFPYGWWYGVVGHLESCDRN 1003
            +W+RLR PP+DTPPHDLH+SDCLN+L PGDHIEIQWR+NK+FPYGWWYGVVGHLE+CD +
Sbjct: 266  QWERLRSPPIDTPPHDLHVSDCLNELWPGDHIEIQWRKNKDFPYGWWYGVVGHLETCDGD 325

Query: 1004 KNFCRCHTSDTLVLEFNQYAPGSRWRETIINRNNHREEGNEADGFYGGIRKIYSTEEIAM 1183
             N C CH SDT+VLEFNQY PGSRWR  II+R +HREEGNE DGFYGGIRK+YS EEI+M
Sbjct: 326  ANHCSCHYSDTVVLEFNQYTPGSRWRLAIIDRKDHREEGNEVDGFYGGIRKLYSNEEISM 385

Query: 1184 WKRLWPKEVLE 1216
            WK+LWP ++LE
Sbjct: 386  WKQLWPTDILE 396


>ref|XP_002314008.1| predicted protein [Populus trichocarpa] gi|222850416|gb|EEE87963.1|
            predicted protein [Populus trichocarpa]
          Length = 405

 Score =  544 bits (1401), Expect = e-152
 Identities = 260/380 (68%), Positives = 295/380 (77%), Gaps = 10/380 (2%)
 Frame = +2

Query: 107  PWVNEIRLLSVWFWKELSCFSVLWLKKNNLSGS--LSDIPARMSFKKRSLS--AKVENV- 271
            PW +EIRLLSVWF K+L  FS L   +N L     ++ IP + S KK SLS  A+ E   
Sbjct: 26   PWASEIRLLSVWFLKDLFLFSYLGSLRNTLLEVFYINIIPLKTSIKKMSLSSSARAEKSA 85

Query: 272  --DETDEMSVLDLPELTLECILGMLPPSSLCNMAGVCSSLRERCRSDHLWERHMKEKWGR 445
              DET  MSVLDLPEL LEC+L  LPP+ LC+MAGVC+SLRERC SDHLWE+HMK KWGR
Sbjct: 86   LDDETGGMSVLDLPELALECVLERLPPAGLCSMAGVCTSLRERCVSDHLWEKHMKHKWGR 145

Query: 446  VIGKAAYKEWQCHIATKKDY-AFNQSMHRGFVPTLSSVWPLSWIRSKLD--NHSNPASSL 616
            VIG AAY+EWQ H+A++KD  +  Q   +G +  LS  WP SW   K+D  N+S   SSL
Sbjct: 146  VIGPAAYREWQWHLASRKDLGSCKQGKPKGLMRLLSIFWPSSWSTPKVDPVNNSRQRSSL 205

Query: 617  PADSIKSWYLAFESGKFWFPAQVYNREHGHVGFMLSCYDAELSYDRHTDTFHARYPPHGR 796
            P  SI SWYLA E+GKFWFPAQV+NRE+GHVGFMLSCYDAEL+YD  TDTF ARYPPHGR
Sbjct: 206  PVHSIMSWYLALETGKFWFPAQVFNRENGHVGFMLSCYDAELNYDPRTDTFQARYPPHGR 265

Query: 797  RTIVIEERVEWDRLRPPPVDTPPHDLHLSDCLNDLRPGDHIEIQWRRNKEFPYGWWYGVV 976
            R I IE  V W+RLR P VDT PHDLH+SDCL+DL PGDHIEIQWRRNKEFPYGWWYGVV
Sbjct: 266  RAISIESGVPWERLRAPSVDTSPHDLHISDCLHDLLPGDHIEIQWRRNKEFPYGWWYGVV 325

Query: 977  GHLESCDRNKNFCRCHTSDTLVLEFNQYAPGSRWRETIINRNNHREEGNEADGFYGGIRK 1156
            GHLESCD N+N+CRCH SDT+VLEF+QY PGSRWR T +NR  HREEGNEADGFYGGIRK
Sbjct: 326  GHLESCDGNENYCRCHNSDTVVLEFHQYTPGSRWRSTTVNRKEHREEGNEADGFYGGIRK 385

Query: 1157 IYSTEEIAMWKRLWPKEVLE 1216
            +Y  EEI+ WKRLWP EVLE
Sbjct: 386  LYKNEEISRWKRLWPTEVLE 405


>ref|XP_003545428.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 397

 Score =  537 bits (1383), Expect = e-150
 Identities = 246/373 (65%), Positives = 295/373 (79%), Gaps = 4/373 (1%)
 Frame = +2

Query: 110  WVNEIRLLSVWFWKELSCFSVLWLKKNNL-SGSLSDIPARMSFKKRSLSAKVENVDETDE 286
            W +E+RL+S  F+K+LS  S+  L +N L  G L  IP RMS  K+S  +KVEN++++ +
Sbjct: 27   WASELRLISPLFYKDLSVKSISKLFRNRLWLGFLCQIPTRMSLMKKS--SKVENIEDSQD 84

Query: 287  MSVLDLPELTLECILGMLPPSSLCNMAGVCSSLRERCRSDHLWERHMKEKWGRVIGKAAY 466
            MSVLDLPEL LECIL  LPP+SLC MAGVC SLRE C SDHLWERHMK+KWGR+IG+AAY
Sbjct: 85   MSVLDLPELVLECILEKLPPASLCQMAGVCRSLRESCVSDHLWERHMKQKWGRIIGQAAY 144

Query: 467  KEWQCHIATKKDYA-FNQSMHRGFVPTLSSVWPLSWIRSKLD--NHSNPASSLPADSIKS 637
            +EW+ H+A+K +         R  +  +S  WP SW+R+K+D  N     S LP DS+ +
Sbjct: 145  REWKWHVASKGNVGTLRHGKQRSLLRLVSLSWPFSWMRTKVDANNSIKQQSYLPPDSLMT 204

Query: 638  WYLAFESGKFWFPAQVYNREHGHVGFMLSCYDAELSYDRHTDTFHARYPPHGRRTIVIEE 817
            WYLA E+G FWFPAQVYNRE+GHVGFMLSCYDAELSYD H DTF ARYPPHGRRT+ +E 
Sbjct: 205  WYLALETGNFWFPAQVYNRENGHVGFMLSCYDAELSYDPHNDTFQARYPPHGRRTVAVEH 264

Query: 818  RVEWDRLRPPPVDTPPHDLHLSDCLNDLRPGDHIEIQWRRNKEFPYGWWYGVVGHLESCD 997
             + W+RLR PPVDTPPHDLH+SDC+ DL PGDHIEIQWRRNKEFPYGWWYGVVGHLE CD
Sbjct: 265  GIPWERLRAPPVDTPPHDLHISDCVYDLHPGDHIEIQWRRNKEFPYGWWYGVVGHLELCD 324

Query: 998  RNKNFCRCHTSDTLVLEFNQYAPGSRWRETIINRNNHREEGNEADGFYGGIRKIYSTEEI 1177
             N+N+CRCH+SDT+VLEFNQY P SRWR+T I+R +HREEGNEADGFYGGIRKI S  EI
Sbjct: 325  GNENYCRCHSSDTVVLEFNQYTPDSRWRKTTISRKDHREEGNEADGFYGGIRKIKSETEI 384

Query: 1178 AMWKRLWPKEVLE 1216
            ++WK +WP EVL+
Sbjct: 385  SIWKSIWPSEVLD 397


>emb|CBI24276.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  535 bits (1377), Expect = e-149
 Identities = 246/371 (66%), Positives = 287/371 (77%), Gaps = 2/371 (0%)
 Frame = +2

Query: 110  WVNEIRLLS-VWFWKELSCFSVLWLKKNNLSGSLSDIPARMSFKKRSLSAKVENVDETDE 286
            WV+EIRL S +WFWKELS F++    KN+L                      ENV+   E
Sbjct: 26   WVSEIRLSSSLWFWKELSFFTIYRSIKNSL---------------------FENVEVGLE 64

Query: 287  MSVLDLPELTLECILGMLPPSSLCNMAGVCSSLRERCRSDHLWERHMKEKWGRVIGKAAY 466
            M +LDLPEL LECIL  LPP  LC++ GVCSSLR+RC SD+ W+RHMKEKWGR++G+AAY
Sbjct: 65   MGLLDLPELVLECILERLPPEGLCSLGGVCSSLRDRCMSDYFWKRHMKEKWGRILGRAAY 124

Query: 467  KEWQCHIATKKDY-AFNQSMHRGFVPTLSSVWPLSWIRSKLDNHSNPASSLPADSIKSWY 643
            +EWQ H+A++KD     Q    G +  LS   PLSWIRS+L N +   SS+P DSI SWY
Sbjct: 125  REWQWHMASRKDSDTLEQGKPNGLMRLLSRFGPLSWIRSRLSNSTPQRSSVPVDSIMSWY 184

Query: 644  LAFESGKFWFPAQVYNREHGHVGFMLSCYDAELSYDRHTDTFHARYPPHGRRTIVIEERV 823
            LA E+G+FWFPAQVYNRE GHVGFMLSCYDAELSYD HTDTF ARYPPHGRRT+ IE  V
Sbjct: 185  LALETGRFWFPAQVYNRESGHVGFMLSCYDAELSYDSHTDTFQARYPPHGRRTVAIENGV 244

Query: 824  EWDRLRPPPVDTPPHDLHLSDCLNDLRPGDHIEIQWRRNKEFPYGWWYGVVGHLESCDRN 1003
             WDRLR PPV+TPPHDLH+SDCLN+L PGDHIEIQWRRNKEFPYGWWYG+VGHLESCD N
Sbjct: 245  SWDRLRAPPVETPPHDLHMSDCLNELHPGDHIEIQWRRNKEFPYGWWYGIVGHLESCDGN 304

Query: 1004 KNFCRCHTSDTLVLEFNQYAPGSRWRETIINRNNHREEGNEADGFYGGIRKIYSTEEIAM 1183
            +++CRCH S+T+VLEFNQY PGSRWR T INR +HREEGNEADGFYGGIRK+   +EI++
Sbjct: 305  ESYCRCHNSETVVLEFNQYTPGSRWRRTSINRKDHREEGNEADGFYGGIRKLCRNDEISV 364

Query: 1184 WKRLWPKEVLE 1216
            WK+LWP EVLE
Sbjct: 365  WKQLWPAEVLE 375


Top