BLASTX nr result

ID: Cimicifuga21_contig00010959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010959
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137739.1| PREDICTED: ataxin-3 homolog [Cucumis sativus...   292   4e-77
ref|XP_003516934.1| PREDICTED: ataxin-3 homolog [Glycine max]         286   3e-75
gb|AFK38244.1| unknown [Lotus japonicus]                              284   1e-74
ref|XP_003520933.1| PREDICTED: ataxin-3 homolog [Glycine max]         281   5e-74
ref|XP_002527866.1| Ataxin-3, putative [Ricinus communis] gi|223...   281   9e-74

>ref|XP_004137739.1| PREDICTED: ataxin-3 homolog [Cucumis sativus]
           gi|449483438|ref|XP_004156591.1| PREDICTED: ataxin-3
           homolog [Cucumis sativus]
          Length = 426

 Score =  292 bits (747), Expect = 4e-77
 Identities = 142/160 (88%), Positives = 148/160 (92%)
 Frame = +3

Query: 144 EGPSNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAAVASDLDRTERQMMLEGGASD 323
           +G  NGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAA+ASDLDR ERQMML G  + 
Sbjct: 2   DGACNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLSGSTTG 61

Query: 324 DFLRFDSEGSHNVSMDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHL 503
           DFL   SE SHNVS+DGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDP+LENAFICHL
Sbjct: 62  DFL---SEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPQLENAFICHL 118

Query: 504 QDHWFSIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLK 623
           QDHWF IRKVNGEWYNFDSLYAAP+HLSKFYLSAYLDSLK
Sbjct: 119 QDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLK 158


>ref|XP_003516934.1| PREDICTED: ataxin-3 homolog [Glycine max]
          Length = 338

 Score =  286 bits (731), Expect = 3e-75
 Identities = 142/162 (87%), Positives = 147/162 (90%)
 Frame = +3

Query: 138 MEEGPSNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAAVASDLDRTERQMMLEGGA 317
           M EG SNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAA+ASDLDR ERQ+ML   A
Sbjct: 1   MMEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQVMLPALA 60

Query: 318 SDDFLRFDSEGSHNVSMDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFIC 497
           S DF       SHNVS+DGDFSIQVLQKALEVWDLQVIPL+SPVAEPAQIDPELENAFIC
Sbjct: 61  SADF------ESHNVSLDGDFSIQVLQKALEVWDLQVIPLDSPVAEPAQIDPELENAFIC 114

Query: 498 HLQDHWFSIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLK 623
           HLQDHWF IRKVNGEWYNFDSLYAAP+HLSKFYLSAYLDSLK
Sbjct: 115 HLQDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLK 156


>gb|AFK38244.1| unknown [Lotus japonicus]
          Length = 345

 Score =  284 bits (726), Expect = 1e-74
 Identities = 143/163 (87%), Positives = 148/163 (90%), Gaps = 1/163 (0%)
 Frame = +3

Query: 138 MEEGPSNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAAVASDLDRTERQMM-LEGG 314
           M EG SNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAA+ASDLD  ERQMM L   
Sbjct: 2   MMEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDCKERQMMMLPSL 61

Query: 315 ASDDFLRFDSEGSHNVSMDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFI 494
           AS DFL  DS   HNVS+DGDFSIQVLQKALEVWDLQVIPL+SPVAEPAQIDPELENAFI
Sbjct: 62  ASGDFLSHDS---HNVSLDGDFSIQVLQKALEVWDLQVIPLDSPVAEPAQIDPELENAFI 118

Query: 495 CHLQDHWFSIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLK 623
           CHLQDHWF IRKVNGEWYNFDSLYAAP+HLSKFYL+AYLDSLK
Sbjct: 119 CHLQDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLAAYLDSLK 161


>ref|XP_003520933.1| PREDICTED: ataxin-3 homolog [Glycine max]
          Length = 336

 Score =  281 bits (720), Expect = 5e-74
 Identities = 140/162 (86%), Positives = 146/162 (90%)
 Frame = +3

Query: 138 MEEGPSNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAAVASDLDRTERQMMLEGGA 317
           M EG SNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAA+ASDLDR ERQ+ML   +
Sbjct: 2   MGEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQVMLPALS 61

Query: 318 SDDFLRFDSEGSHNVSMDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFIC 497
           S DF       SHNVS+DGDFSIQVLQKALEVWDLQVIPL+SPVAEPAQIDPELENAFIC
Sbjct: 62  SADF------ESHNVSLDGDFSIQVLQKALEVWDLQVIPLDSPVAEPAQIDPELENAFIC 115

Query: 498 HLQDHWFSIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLK 623
           HLQDHWF IRKVN EWYNFDSLYAAP+HLSKFYLSAYLDSLK
Sbjct: 116 HLQDHWFCIRKVNREWYNFDSLYAAPQHLSKFYLSAYLDSLK 157


>ref|XP_002527866.1| Ataxin-3, putative [Ricinus communis] gi|223532717|gb|EEF34497.1|
           Ataxin-3, putative [Ricinus communis]
          Length = 266

 Score =  281 bits (718), Expect = 9e-74
 Identities = 139/161 (86%), Positives = 147/161 (91%), Gaps = 1/161 (0%)
 Frame = +3

Query: 144 EGPSNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAAVASDLDRTERQMMLEGGASD 323
           EG SNGGMLYHEVQE+KLCAVHCVNTVLQGPFFSEFDLAA+ASDLD  ERQMM  GG+S 
Sbjct: 2   EGVSNGGMLYHEVQEAKLCAVHCVNTVLQGPFFSEFDLAALASDLDCKERQMMQMGGSST 61

Query: 324 -DFLRFDSEGSHNVSMDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICH 500
            DFL  +S   HNVS+DGDFSIQVL+KALEVWDLQVIPLNSPVAEPAQIDP+LENAFICH
Sbjct: 62  GDFLSVES---HNVSLDGDFSIQVLEKALEVWDLQVIPLNSPVAEPAQIDPDLENAFICH 118

Query: 501 LQDHWFSIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLK 623
           L DHWF IRKVNGEWYNFDSLYAAPEHLSKFYL+AYLDSLK
Sbjct: 119 LHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLAAYLDSLK 159


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