BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010956
         (1303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like...   185   3e-44
ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vit...   176   9e-42
ref|XP_002318658.1| predicted protein [Populus trichocarpa] gi|2...   167   5e-39
ref|XP_002526350.1| GTP binding protein, putative [Ricinus commu...   156   1e-35
ref|NP_192803.4| GTP binding protein [Arabidopsis thaliana] gi|3...   155   2e-35

>ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
            gi|449482814|ref|XP_004156412.1| PREDICTED: ribosome
            biogenesis GTPase A-like [Cucumis sativus]
          Length = 366

 Score =  185 bits (469), Expect = 3e-44
 Identities = 98/149 (65%), Positives = 115/149 (77%), Gaps = 4/149 (2%)
 Frame = +1

Query: 868  MATARLARQLGAAV--VKAGADKSSTWFTPHMAAASRAILDRIPLVDFTLEVRDARIPIS 1041
            MA A L R++G A+  + AG   SS W+  HM AASRA+ +RIPLVDF LEVRDARIP S
Sbjct: 1    MAAATLMRKIGTAINQLAAGNRISSGWYDAHMEAASRAVAERIPLVDFVLEVRDARIPTS 60

Query: 1042 SGYGHMRNFP-SSRRIIVLNKTDLASHSQTQEWSRHFQEQNCICYGINSHNKDNIKEFLN 1218
            S Y  M+N P SS+RIIVLNKTDLA  SQT+ W+RHF++ NCI YG+NSHNK+NI+EFLN
Sbjct: 61   SEYEMMKNHPPSSKRIIVLNKTDLADQSQTEVWTRHFEDHNCISYGVNSHNKENIREFLN 120

Query: 1219 FLQAQVRELNFS-QSKFTTTMMLVGIPNV 1302
            FLQA+VREL  S  S   TTMMLVGIPNV
Sbjct: 121  FLQARVRELKKSGHSSHATTMMLVGIPNV 149


>ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vitis vinifera]
            gi|297744953|emb|CBI38545.3| unnamed protein product
            [Vitis vinifera]
          Length = 369

 Score =  176 bits (447), Expect = 9e-42
 Identities = 90/147 (61%), Positives = 113/147 (76%), Gaps = 2/147 (1%)
 Frame = +1

Query: 868  MATARLARQLGAAVVKAGADKSSTWFTPHMAAASRAILDRIPLVDFTLEVRDARIPISSG 1047
            M  A L ++LG+ V +A    + TWF+PHMAAASRA+ +RIPLVD  LEVRDARIP+SS 
Sbjct: 1    MTIANLEKRLGSGVKRA----AKTWFSPHMAAASRAVSERIPLVDLVLEVRDARIPLSSE 56

Query: 1048 YGHMRNFPSS-RRIIVLNKTDLASHSQTQEWSRHFQEQNCICYGINSHNKDNIKEFLNFL 1224
            Y  +RNFPSS +RIIVLNK DLA+  + +EW R+F++QNCI +G+NSHNKDNIKE L FL
Sbjct: 57   YDQLRNFPSSSKRIIVLNKMDLANRLEIKEWMRYFEQQNCISFGVNSHNKDNIKECLKFL 116

Query: 1225 QAQVREL-NFSQSKFTTTMMLVGIPNV 1302
            QAQV+ +     S +T T+MLVGIPNV
Sbjct: 117  QAQVKGVKKIDHSSYTATIMLVGIPNV 143


>ref|XP_002318658.1| predicted protein [Populus trichocarpa] gi|222859331|gb|EEE96878.1|
            predicted protein [Populus trichocarpa]
          Length = 338

 Score =  167 bits (423), Expect = 5e-39
 Identities = 86/141 (60%), Positives = 109/141 (77%), Gaps = 3/141 (2%)
 Frame = +1

Query: 889  RQLGAAVVKAGADKSSTWFTPHMAAASRAILDRIPLVDFTLEVRDARIPISSGYGHMRNF 1068
            +++G A+ KA     S W++ HMAAAS AI  RIPL DF LEVRDARIP+SS    + NF
Sbjct: 11   KEIGEALKKA----KSGWYSLHMAAASHAIAQRIPLADFILEVRDARIPLSSHCQLLSNF 66

Query: 1069 PSS--RRIIVLNKTDLASHSQTQEWSRHFQEQNCICYGINSHNKDNIKEFLNFLQAQVRE 1242
            P S  RRIIV+NKTDLA+ SQ +EW+++F++QNCI YG+NSHNK+++K+FLNFLQAQVRE
Sbjct: 67   PPSSLRRIIVMNKTDLANRSQLKEWTKYFEQQNCISYGVNSHNKEDVKKFLNFLQAQVRE 126

Query: 1243 L-NFSQSKFTTTMMLVGIPNV 1302
            L     S  TTTMM++GIPNV
Sbjct: 127  LKRIDHSGHTTTMMIIGIPNV 147


>ref|XP_002526350.1| GTP binding protein, putative [Ricinus communis]
            gi|223534309|gb|EEF36021.1| GTP binding protein, putative
            [Ricinus communis]
          Length = 373

 Score =  156 bits (395), Expect = 1e-35
 Identities = 81/142 (57%), Positives = 103/142 (72%), Gaps = 2/142 (1%)
 Frame = +1

Query: 883  LARQLGAAVVKAGADKSSTWFTPHMAAASRAILDRIPLVDFTLEVRDARIPISSGYGHMR 1062
            LA ++G  V+KA  ++   W+ PHMAAAS AI +RI LVDF +EVRDARIP+SS    + 
Sbjct: 2    LASEIGKRVMKASRNREQRWYNPHMAAASSAIAERISLVDFVIEVRDARIPLSSECQLLT 61

Query: 1063 NFP-SSRRIIVLNKTDLASHSQTQEWSRHFQEQNCICYGINSHNKDNIKEFLNFLQAQVR 1239
            N   SSRRIIV+NK DLA+  Q ++W ++F+++  + Y INSHNKDN+KEFLNFLQ QVR
Sbjct: 62   NHSDSSRRIIVMNKMDLANRLQLKDWIKYFKQRGFVSYAINSHNKDNVKEFLNFLQGQVR 121

Query: 1240 EL-NFSQSKFTTTMMLVGIPNV 1302
             L N   S  T TMM+VGIPNV
Sbjct: 122  GLKNIDHSGCTITMMMVGIPNV 143


>ref|NP_192803.4| GTP binding protein [Arabidopsis thaliana] gi|3600035|gb|AAC35523.1|
            contains similarity to GTP-binding proteins [Arabidopsis
            thaliana] gi|332657513|gb|AEE82913.1| GTP binding protein
            [Arabidopsis thaliana]
          Length = 377

 Score =  155 bits (392), Expect = 2e-35
 Identities = 84/151 (55%), Positives = 111/151 (73%), Gaps = 6/151 (3%)
 Frame = +1

Query: 868  MATAR---LARQLGAAVVKAGADKSSTWFTPHMAAASRAILDRIPLVDFTLEVRDARIPI 1038
            MATA+   +AR++G AV+KA  + +  W+ PHMAAA RAI +RIPLVDF LE+RDARIP+
Sbjct: 1    MATAKTWKIAREIGDAVIKASRNPNRRWYGPHMAAAVRAISERIPLVDFVLEIRDARIPL 60

Query: 1039 SSGYGHMRNFP--SSRRIIVLNKTDLASHSQTQEWSRHFQEQNCICYGINSHNKDNIKEF 1212
            SS Y  +R F    S+RIIVLNK +LA   + ++   +F+E+N + Y +NSHNKD +K+ 
Sbjct: 61   SSEYELLRKFSPLPSKRIIVLNKMELADPLELKKCIDYFEERNYLSYAVNSHNKDCVKQL 120

Query: 1213 LNFLQAQVRELN-FSQSKFTTTMMLVGIPNV 1302
            LNFLQ+QVREL+    S  TTTMML+GIPNV
Sbjct: 121  LNFLQSQVRELHKAGHSGHTTTMMLLGIPNV 151