BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010912
         (1320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis v...   194   8e-99
gb|AFK37481.1| unknown [Medicago truncatula]                          187   4e-92
sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; A...   191   8e-92
ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thalia...   190   8e-92
ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [...   187   1e-91

>ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis vinifera]
           gi|297736218|emb|CBI24856.3| unnamed protein product
           [Vitis vinifera]
          Length = 226

 Score =  194 bits (492), Expect(3) = 8e-99
 Identities = 97/106 (91%), Positives = 103/106 (97%)
 Frame = -2

Query: 728 SAYYRGAVGAMLVYDMTKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLTTLQTVPTE 549
           SAYYRGAVGAMLVYD+TKRQSFDHVARWL+ELRGHADKNIVIML+GNKSDL TLQ VPTE
Sbjct: 83  SAYYRGAVGAMLVYDITKRQSFDHVARWLQELRGHADKNIVIMLVGNKSDLGTLQAVPTE 142

Query: 548 DAKEFAQMENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLVA 411
           DAKEFA+ ENLFFMETSALEATNVETAFL+VLTEIYRIISKK+LVA
Sbjct: 143 DAKEFAERENLFFMETSALEATNVETAFLSVLTEIYRIISKKTLVA 188



 Score =  168 bits (425), Expect(3) = 8e-99
 Identities = 83/89 (93%), Positives = 87/89 (97%)
 Frame = -1

Query: 1056 MSNLYGGDFNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVI 877
            MSN Y GD++QKIDYVFKVVLIGDSAVGKSQLLARFARNEF+LDSKATIGVEFQT+TLVI
Sbjct: 1    MSNFYKGDYSQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTLVI 60

Query: 876  DHKTVKAQIWDTAGQERYRAVTSAYYRGA 790
            DHKTVKAQIWDTAGQERYRAVTSAYYRGA
Sbjct: 61   DHKTVKAQIWDTAGQERYRAVTSAYYRGA 89



 Score = 48.1 bits (113), Expect(3) = 8e-99
 Identities = 23/34 (67%), Positives = 26/34 (76%)
 Frame = -3

Query: 319 ESGGNSSLLKGTKIVVPGQEADPVRKKPICCVSS 218
           ESGGNSSLLKGTKI+VPG+E      K  CC+SS
Sbjct: 193 ESGGNSSLLKGTKIIVPGKEPKSEGSKYNCCLSS 226


>gb|AFK37481.1| unknown [Medicago truncatula]
          Length = 223

 Score =  187 bits (475), Expect(3) = 4e-92
 Identities = 93/106 (87%), Positives = 100/106 (94%)
 Frame = -2

Query: 728 SAYYRGAVGAMLVYDMTKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLTTLQTVPTE 549
           SAYYRGAVGAMLVYDMTKRQSFDH+ARWLEELRGHAD NIVIMLIGNK DL TL+ VPTE
Sbjct: 82  SAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADTNIVIMLIGNKCDLGTLKAVPTE 141

Query: 548 DAKEFAQMENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLVA 411
           DA+EFAQ ENLFFMETSALE+TNVETAFLT+LTEIYR+ISKK+L A
Sbjct: 142 DAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTA 187



 Score =  160 bits (405), Expect(3) = 4e-92
 Identities = 80/89 (89%), Positives = 88/89 (98%)
 Frame = -1

Query: 1056 MSNLYGGDFNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVI 877
            MSNLYG D+NQKIDYVFKVVLIGDSAVGK+QLLARF+RN+F++DSKATIGVEFQT+TLVI
Sbjct: 1    MSNLYG-DYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVI 59

Query: 876  DHKTVKAQIWDTAGQERYRAVTSAYYRGA 790
            D+KTVKAQIWDTAGQERYRAVTSAYYRGA
Sbjct: 60   DNKTVKAQIWDTAGQERYRAVTSAYYRGA 88



 Score = 40.0 bits (92), Expect(3) = 4e-92
 Identities = 17/31 (54%), Positives = 21/31 (67%)
 Frame = -3

Query: 319 ESGGNSSLLKGTKIVVPGQEADPVRKKPICC 227
           + GG S LLKGT+I+VP Q+A    KK  CC
Sbjct: 192 DPGGGSGLLKGTRIIVPNQDASAYEKKGGCC 222


>sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
           regulatory protein RGP1 gi|50251643|dbj|BAD29646.1|
           putative ras-related GTP-binding protein [Oryza sativa
           Japonica Group] gi|222641214|gb|EEE69346.1| hypothetical
           protein OsJ_28668 [Oryza sativa Japonica Group]
          Length = 226

 Score =  191 bits (485), Expect(3) = 8e-92
 Identities = 95/106 (89%), Positives = 102/106 (96%)
 Frame = -2

Query: 728 SAYYRGAVGAMLVYDMTKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLTTLQTVPTE 549
           SAYYRGAVGAMLVYD+TKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDL TL+ VPTE
Sbjct: 85  SAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTE 144

Query: 548 DAKEFAQMENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLVA 411
           DAKEFA+ ENLFFMETSALE+TNVE AF+TVLTEIYRI+SKK+LVA
Sbjct: 145 DAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVA 190



 Score =  150 bits (379), Expect(3) = 8e-92
 Identities = 76/83 (91%), Positives = 79/83 (95%)
 Frame = -1

Query: 1038 GDFNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVIDHKTVK 859
            G+  QKIDYVFKVVLIGDSAVGKSQLLARFARNEF+LDSKATIGVEFQTRTL ID +TVK
Sbjct: 9    GEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVK 68

Query: 858  AQIWDTAGQERYRAVTSAYYRGA 790
            AQIWDTAGQERYRAVTSAYYRGA
Sbjct: 69   AQIWDTAGQERYRAVTSAYYRGA 91



 Score = 45.1 bits (105), Expect(3) = 8e-92
 Identities = 23/33 (69%), Positives = 25/33 (75%)
 Frame = -3

Query: 319 ESGGNSSLLKGTKIVVPGQEADPVRKKPICCVS 221
           +S GNSSLLKGTKIVVPGQE  P  K   CC+S
Sbjct: 195 DSSGNSSLLKGTKIVVPGQEPAPPTKAS-CCMS 226


>ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
           gi|297834018|ref|XP_002884891.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|75334990|sp|Q9LH50.1|RAA4D_ARATH RecName:
           Full=Ras-related protein RABA4d; Short=AtRABA4d
           gi|12322042|gb|AAG51065.1|AC069472_5 ras-related
           GTP-binding protein; 5118-4176 [Arabidopsis thaliana]
           gi|9294115|dbj|BAB01966.1| GTP-binding protein-like
           [Arabidopsis thaliana] gi|67633628|gb|AAY78738.1|
           Ras-related GTP-binding family protein [Arabidopsis
           thaliana] gi|297330731|gb|EFH61150.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332641639|gb|AEE75160.1| RAB GTPase-like protein A4D
           [Arabidopsis thaliana]
          Length = 222

 Score =  190 bits (482), Expect(3) = 8e-92
 Identities = 95/106 (89%), Positives = 101/106 (95%)
 Frame = -2

Query: 728 SAYYRGAVGAMLVYDMTKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLTTLQTVPTE 549
           SAYYRGAVGAMLVYDMTKRQSFDH+A+WLEELRGHADKNIVIMLIGNK DL +L+ VPTE
Sbjct: 82  SAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTE 141

Query: 548 DAKEFAQMENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLVA 411
           DA+EFAQ ENLFFMETSALEATNVETAFLT+LTEIYRIISKKSL A
Sbjct: 142 DAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTA 187



 Score =  164 bits (414), Expect(3) = 8e-92
 Identities = 83/89 (93%), Positives = 88/89 (98%)
 Frame = -1

Query: 1056 MSNLYGGDFNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVI 877
            MSNLYG D+NQKIDYVFKVVLIGDSAVGK+QLLARFARNEFS+DSKATIGVEFQT+TLVI
Sbjct: 1    MSNLYG-DYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVI 59

Query: 876  DHKTVKAQIWDTAGQERYRAVTSAYYRGA 790
            D+KTVKAQIWDTAGQERYRAVTSAYYRGA
Sbjct: 60   DNKTVKAQIWDTAGQERYRAVTSAYYRGA 88



 Score = 32.7 bits (73), Expect(3) = 8e-92
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = -3

Query: 319 ESGGNSSLLKGTKIVVPGQEADPVRKKPICCVSS 218
           ++ GNSSLLKGT+I++P ++     K+  CC  S
Sbjct: 191 DADGNSSLLKGTRIIIPSEQES--GKRGGCCGKS 222


>ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
           gi|449476501|ref|XP_004154754.1| PREDICTED: ras-related
           protein RABA4d-like [Cucumis sativus]
          Length = 223

 Score =  187 bits (475), Expect(3) = 1e-91
 Identities = 93/106 (87%), Positives = 100/106 (94%)
 Frame = -2

Query: 728 SAYYRGAVGAMLVYDMTKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLTTLQTVPTE 549
           SAYYRGAVGAMLVYDMTKRQSFDH+ARWLEELRGHADKNIVIMLIGNK DL +L+ VPTE
Sbjct: 82  SAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTE 141

Query: 548 DAKEFAQMENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLVA 411
           DA+EFA+ ENLFFMETSALE+TNVETAF T+LTEIYRIISKKSL A
Sbjct: 142 DAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAA 187



 Score =  162 bits (410), Expect(3) = 1e-91
 Identities = 82/89 (92%), Positives = 87/89 (97%)
 Frame = -1

Query: 1056 MSNLYGGDFNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVI 877
            MSNLYG D+NQKIDYVFKVVLIGDSAVGK+QLLARF+RNEFS+DSKATIGVEFQT+TLVI
Sbjct: 1    MSNLYG-DYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVI 59

Query: 876  DHKTVKAQIWDTAGQERYRAVTSAYYRGA 790
            D KTVKAQIWDTAGQERYRAVTSAYYRGA
Sbjct: 60   DQKTVKAQIWDTAGQERYRAVTSAYYRGA 88



 Score = 36.2 bits (82), Expect(3) = 1e-91
 Identities = 18/32 (56%), Positives = 21/32 (65%)
 Frame = -3

Query: 313 GGNSSLLKGTKIVVPGQEADPVRKKPICCVSS 218
           G N +L KGT IVVPGQ+ D  RK   CC +S
Sbjct: 194 GSNPALFKGTSIVVPGQDQDSGRKG--CCFAS 223