BLASTX nr result

ID: Cimicifuga21_contig00010895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010895
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273481.2| PREDICTED: AT-rich interactive domain-contai...   243   4e-62
emb|CBI34361.3| unnamed protein product [Vitis vinifera]              243   4e-62
ref|XP_002509831.1| DNA binding protein, putative [Ricinus commu...   243   4e-62
emb|CAN60589.1| hypothetical protein VITISV_023124 [Vitis vinifera]   239   1e-60
ref|XP_002304507.1| predicted protein [Populus trichocarpa] gi|2...   233   6e-59

>ref|XP_002273481.2| PREDICTED: AT-rich interactive domain-containing protein 2-like
            [Vitis vinifera]
          Length = 601

 Score =  243 bits (621), Expect = 4e-62
 Identities = 119/215 (55%), Positives = 146/215 (67%)
 Frame = -3

Query: 971  LFDDGQLRKRVSIGPPFQAEIPEWTGMALESDPKWLGTVHWPLITGKQNLLAQGGPIGQG 792
            LF D    K + +GP FQAE+PEWTG   ESD KWLGT  WPL  G+ +   +   +G+G
Sbjct: 387  LFPDDLFLKPIPVGPNFQAEVPEWTGEVTESDSKWLGTQVWPLENGECSFRIEKDCVGRG 446

Query: 791  RHDSCNCRVPGSVECVRFHIAEKKMRLKSELGLLFYTWRFHYMGXXXXXXXXXXXEKKFK 612
            + DSC+CR  GSVECVRFHIAEK+M+LK +LG LFY WRF  MG           EK+FK
Sbjct: 447  KPDSCDCRFSGSVECVRFHIAEKRMKLKLDLGSLFYHWRFDRMGEEISLAWTTEEEKRFK 506

Query: 611  ATVRLNPRSLGKFFWNQLCRGFRTKSRKSLVSYFFNVFVLRRRTYQNRVTPSKIDSDDDE 432
              +RLN       FW+   R F TK+R++LVSY+FNVF++RRR YQNRVTP KIDSDDDE
Sbjct: 507  HMIRLNSSLQSPSFWDNALRIFPTKTREALVSYYFNVFLIRRRIYQNRVTPRKIDSDDDE 566

Query: 431  SEFGSLSNSFGHEAVKVPDFRLIPCTKSYQCTDLD 327
             EFGSL  SFGHE +KVP    + CT++ Q T+LD
Sbjct: 567  LEFGSLGGSFGHEVIKVPWSEFLTCTQNEQSTELD 601


>emb|CBI34361.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  243 bits (621), Expect = 4e-62
 Identities = 119/215 (55%), Positives = 146/215 (67%)
 Frame = -3

Query: 971 LFDDGQLRKRVSIGPPFQAEIPEWTGMALESDPKWLGTVHWPLITGKQNLLAQGGPIGQG 792
           LF D    K + +GP FQAE+PEWTG   ESD KWLGT  WPL  G+ +   +   +G+G
Sbjct: 318 LFPDDLFLKPIPVGPNFQAEVPEWTGEVTESDSKWLGTQVWPLENGECSFRIEKDCVGRG 377

Query: 791 RHDSCNCRVPGSVECVRFHIAEKKMRLKSELGLLFYTWRFHYMGXXXXXXXXXXXEKKFK 612
           + DSC+CR  GSVECVRFHIAEK+M+LK +LG LFY WRF  MG           EK+FK
Sbjct: 378 KPDSCDCRFSGSVECVRFHIAEKRMKLKLDLGSLFYHWRFDRMGEEISLAWTTEEEKRFK 437

Query: 611 ATVRLNPRSLGKFFWNQLCRGFRTKSRKSLVSYFFNVFVLRRRTYQNRVTPSKIDSDDDE 432
             +RLN       FW+   R F TK+R++LVSY+FNVF++RRR YQNRVTP KIDSDDDE
Sbjct: 438 HMIRLNSSLQSPSFWDNALRIFPTKTREALVSYYFNVFLIRRRIYQNRVTPRKIDSDDDE 497

Query: 431 SEFGSLSNSFGHEAVKVPDFRLIPCTKSYQCTDLD 327
            EFGSL  SFGHE +KVP    + CT++ Q T+LD
Sbjct: 498 LEFGSLGGSFGHEVIKVPWSEFLTCTQNEQSTELD 532


>ref|XP_002509831.1| DNA binding protein, putative [Ricinus communis]
            gi|223549730|gb|EEF51218.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 656

 Score =  243 bits (621), Expect = 4e-62
 Identities = 114/210 (54%), Positives = 151/210 (71%)
 Frame = -3

Query: 962  DGQLRKRVSIGPPFQAEIPEWTGMALESDPKWLGTVHWPLITGKQNLLAQGGPIGQGRHD 783
            D  + + VS+G  FQAE+PEWTG+  ES+ KWLGT  WPL  G+ N + Q   IG+GR +
Sbjct: 445  DIHIHRHVSVGRRFQAEVPEWTGLVSESESKWLGTQAWPLEFGEHNAMVQEDTIGKGRPE 504

Query: 782  SCNCRVPGSVECVRFHIAEKKMRLKSELGLLFYTWRFHYMGXXXXXXXXXXXEKKFKATV 603
            SC C +PGSVECVRFHIAE +++LK ELG +FY W+F  MG           EK+FK  V
Sbjct: 505  SCGCELPGSVECVRFHIAENRIKLKIELGSVFYHWKFDCMGEEIALRWTAEEEKRFKDVV 564

Query: 602  RLNPRSLGKFFWNQLCRGFRTKSRKSLVSYFFNVFVLRRRTYQNRVTPSKIDSDDDESEF 423
            R N  SL KFFW+   + FR K+++ LVSY+FNVF+++RR+YQNRVTP  IDSDDDESEF
Sbjct: 565  RFNLPSLDKFFWDNSRKYFRRKTKEELVSYYFNVFLVQRRSYQNRVTPKHIDSDDDESEF 624

Query: 422  GSLSNSFGHEAVKVPDFRLIPCTKSYQCTD 333
            GSLS+++G +AV VP  +++ C+++ QCTD
Sbjct: 625  GSLSDTYGQQAVTVPGTKMLMCSENKQCTD 654


>emb|CAN60589.1| hypothetical protein VITISV_023124 [Vitis vinifera]
          Length = 258

 Score =  239 bits (609), Expect = 1e-60
 Identities = 118/215 (54%), Positives = 144/215 (66%)
 Frame = -3

Query: 971 LFDDGQLRKRVSIGPPFQAEIPEWTGMALESDPKWLGTVHWPLITGKQNLLAQGGPIGQG 792
           LF D    K + +GP FQAE P+WTG   ESD KWLGT  WPL  G+ +   +    G+G
Sbjct: 44  LFPDDLFLKPIPVGPNFQAEAPKWTGEVTESDSKWLGTQVWPLENGECSFRIEKDCAGRG 103

Query: 791 RHDSCNCRVPGSVECVRFHIAEKKMRLKSELGLLFYTWRFHYMGXXXXXXXXXXXEKKFK 612
           + DSC+CR  GSVECVRFHIAEK+M+LK +LG LFY WRF  MG           EK+FK
Sbjct: 104 KPDSCDCRFSGSVECVRFHIAEKRMKLKLDLGSLFYHWRFDRMGEEISLAWTTEEEKRFK 163

Query: 611 ATVRLNPRSLGKFFWNQLCRGFRTKSRKSLVSYFFNVFVLRRRTYQNRVTPSKIDSDDDE 432
             +RLN       FW+   R F TK+R++LVSY+FNVF++RRR YQNRVTP KIDSDDDE
Sbjct: 164 HMIRLNSSLQSPSFWDNALRIFPTKTREALVSYYFNVFLIRRRIYQNRVTPRKIDSDDDE 223

Query: 431 SEFGSLSNSFGHEAVKVPDFRLIPCTKSYQCTDLD 327
            EFGSL  SFGHE +KVP    + CT++ Q T+LD
Sbjct: 224 LEFGSLGGSFGHEVIKVPWSEFLTCTQNEQSTELD 258


>ref|XP_002304507.1| predicted protein [Populus trichocarpa] gi|222841939|gb|EEE79486.1|
            predicted protein [Populus trichocarpa]
          Length = 643

 Score =  233 bits (594), Expect = 6e-59
 Identities = 110/210 (52%), Positives = 146/210 (69%)
 Frame = -3

Query: 962  DGQLRKRVSIGPPFQAEIPEWTGMALESDPKWLGTVHWPLITGKQNLLAQGGPIGQGRHD 783
            D  +R+ V++GP FQAE+PEW G+  ES  KWLGT  WPL     N      PIG+G   
Sbjct: 432  DKHVRRHVAVGPLFQAEVPEWIGVVSESASKWLGTRLWPLECENNNAPVAMDPIGKGGIS 491

Query: 782  SCNCRVPGSVECVRFHIAEKKMRLKSELGLLFYTWRFHYMGXXXXXXXXXXXEKKFKATV 603
             C C++PGSV CVRFHIAEK+M+LK ELG LFY WRF +MG           EK+FK  V
Sbjct: 492  LCGCQLPGSVGCVRFHIAEKRMKLKLELGPLFYHWRFDHMGEEVSLRWTTEEEKRFKDMV 551

Query: 602  RLNPRSLGKFFWNQLCRGFRTKSRKSLVSYFFNVFVLRRRTYQNRVTPSKIDSDDDESEF 423
            R NP+S GK FW+   + F  K+R+ L+SY+FN ++++RR+YQNRVTP  IDSDDDE++F
Sbjct: 552  RFNPQSAGKCFWDNKRKYFPRKTREELISYYFNAYLVQRRSYQNRVTPKYIDSDDDETKF 611

Query: 422  GSLSNSFGHEAVKVPDFRLIPCTKSYQCTD 333
            GSLS+++GHEA+ VP   ++ C+++ QCTD
Sbjct: 612  GSLSDAYGHEALTVPGANMLICSENKQCTD 641


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