BLASTX nr result

ID: Cimicifuga21_contig00010893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010893
         (1537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533129.1| PREDICTED: F-box protein At5g49610-like [Gly...   498   e-138
ref|XP_002316055.1| f-box family protein [Populus trichocarpa] g...   498   e-138
ref|XP_003546303.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   489   e-136
ref|XP_002273848.1| PREDICTED: F-box protein At5g49610-like [Vit...   487   e-135
ref|XP_003594683.1| F-box protein [Medicago truncatula] gi|21707...   484   e-134

>ref|XP_003533129.1| PREDICTED: F-box protein At5g49610-like [Glycine max]
          Length = 372

 Score =  498 bits (1283), Expect = e-138
 Identities = 230/355 (64%), Positives = 292/355 (82%)
 Frame = -3

Query: 1316 NGFFPEEAILQILARLPIKPLFRFKCVCKFWYGLPSNKYFIQLYNQLSSNNPMVLVEIIK 1137
            +G FP+E ++QILARLP+K LFRFK VCK WY L  +KYFIQLYN++S  NPM+LVEI  
Sbjct: 18   DGIFPDEVVIQILARLPVKSLFRFKTVCKLWYRLSLDKYFIQLYNEVSRKNPMILVEISD 77

Query: 1136 SSCTQSSYIAVDRLRGVSEFSLEFLKDRVKVRASCNGLLCCASVPNKGVYYVCNPMTRDY 957
            SS +++S I VD LRGVSEFSL FL DRVKVRASCNGLLCC+S+P+KGV+YVCNP+TR+Y
Sbjct: 78   SSESKTSLICVDNLRGVSEFSLNFLNDRVKVRASCNGLLCCSSIPDKGVFYVCNPVTREY 137

Query: 956  KMLPRTRERPMTRFHPDDEATLVGLGFDSSTSQFNVVLAGFYRPFGRRPLDSFICLVYDS 777
            ++LP++RER +TRF+PD EATLVGL  DS+  +FNVVLAG++R FG RP  SFICLV+DS
Sbjct: 138  RLLPKSRERHVTRFYPDGEATLVGLACDSAYRKFNVVLAGYHRMFGHRPDGSFICLVFDS 197

Query: 776  ATNMWRRSISSRTEEFTHMNKNQVVYSNGSLHWLTYSCLYILAFDLDNDIWRKILLPDQV 597
              N WR+ +S + + FTHMNKNQVV+ N +LHWLT S  YIL  DL  ++WRK+ LP  +
Sbjct: 198  ELNKWRKFVSFQDDHFTHMNKNQVVFVNNALHWLTASSTYILVLDLSCEVWRKMQLPYDL 257

Query: 596  VGGSGNRLHLLELDGSVSVVRISDSWMNIWVLKDYGREEWFEADRVSLRCIKGLVPSVFP 417
            + G+GNR++LL+ DG +SV++IS++WMNIWVLKDY ++EW   D+VSLRCI+G+VP +FP
Sbjct: 258  ICGTGNRIYLLDFDGCLSVIKISEAWMNIWVLKDYWKDEWCMVDKVSLRCIRGMVPGIFP 317

Query: 416  ISQTSEFVFLATQKQILEYHRKSRVWKEVYSVKNSFTYPLWFSAYAFRSTIVSCH 252
            ISQT E VFLAT KQIL YHRK++VWKE+YSVK S T PLWFSA+A+RST+ SC+
Sbjct: 318  ISQTGECVFLATHKQILVYHRKTQVWKEMYSVKYSSTLPLWFSAHAYRSTMFSCN 372


>ref|XP_002316055.1| f-box family protein [Populus trichocarpa]
            gi|222865095|gb|EEF02226.1| f-box family protein [Populus
            trichocarpa]
          Length = 359

 Score =  498 bits (1281), Expect = e-138
 Identities = 229/355 (64%), Positives = 291/355 (81%)
 Frame = -3

Query: 1316 NGFFPEEAILQILARLPIKPLFRFKCVCKFWYGLPSNKYFIQLYNQLSSNNPMVLVEIIK 1137
            +GF P+E I+Q+LARLP+K LFR K VCK WY L S+KYF+QLYN++++ N MVLVE+  
Sbjct: 5    DGFLPDEVIIQVLARLPVKSLFRAKTVCKLWYKLSSDKYFVQLYNEVATKNSMVLVEVSD 64

Query: 1136 SSCTQSSYIAVDRLRGVSEFSLEFLKDRVKVRASCNGLLCCASVPNKGVYYVCNPMTRDY 957
            S   +SS I  D LRGVSE SL+FLKDRVKVRASCNGLLCC+S+P+KGVYYVCNPMTR++
Sbjct: 65   SPELKSSLICADNLRGVSELSLDFLKDRVKVRASCNGLLCCSSIPDKGVYYVCNPMTREF 124

Query: 956  KMLPRTRERPMTRFHPDDEATLVGLGFDSSTSQFNVVLAGFYRPFGRRPLDSFICLVYDS 777
            ++LPR+RERP+TRF+PD EATLVGLG + S  +FNVVLAG++R FG RP  +FIC+V+DS
Sbjct: 125  RLLPRSRERPVTRFYPDGEATLVGLGCNLSVQKFNVVLAGYHRTFGHRPDGTFICMVFDS 184

Query: 776  ATNMWRRSISSRTEEFTHMNKNQVVYSNGSLHWLTYSCLYILAFDLDNDIWRKILLPDQV 597
             TN WR+ +S + + FT MN+NQVV+ +GSLHWLT  C YIL+ DL+ D+WRKI LPD+V
Sbjct: 185  DTNKWRKFVSFQDDRFTLMNRNQVVFVHGSLHWLTSGCSYILSLDLNCDVWRKISLPDEV 244

Query: 596  VGGSGNRLHLLELDGSVSVVRISDSWMNIWVLKDYGREEWFEADRVSLRCIKGLVPSVFP 417
            +  +GNR HL+ELDG +SV++IS++WM IW +KDY  E+W   DRVSLRCI+G+VP +FP
Sbjct: 245  IYRAGNRAHLVELDGCLSVIQISEAWMKIWAMKDYESEQWHLEDRVSLRCIRGMVPGIFP 304

Query: 416  ISQTSEFVFLATQKQILEYHRKSRVWKEVYSVKNSFTYPLWFSAYAFRSTIVSCH 252
            ISQT E+VFLAT KQ+L Y RKSRVWKE+YSVKNS   PLWFSA+AFR++I  C+
Sbjct: 305  ISQTREYVFLATYKQVLVYQRKSRVWKEMYSVKNSSPLPLWFSAHAFRTSIFLCN 359


>ref|XP_003546303.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At5g49610-like [Glycine
            max]
          Length = 359

 Score =  489 bits (1259), Expect = e-136
 Identities = 229/355 (64%), Positives = 290/355 (81%)
 Frame = -3

Query: 1316 NGFFPEEAILQILARLPIKPLFRFKCVCKFWYGLPSNKYFIQLYNQLSSNNPMVLVEIIK 1137
            +G FP+E ++QILARLP+K LFRFK VCK WY L  +KYFIQL  Q+S  NPM+LVEI  
Sbjct: 6    DGIFPDEVVIQILARLPVKSLFRFKTVCKLWYRLSLDKYFIQLX-QVSRKNPMILVEISD 64

Query: 1136 SSCTQSSYIAVDRLRGVSEFSLEFLKDRVKVRASCNGLLCCASVPNKGVYYVCNPMTRDY 957
            SS +++S I VD LRGVSEFSL FL DRVKVRASCNGLLCC+S+P+KGV+YVCNP+TR+Y
Sbjct: 65   SSESKTSLICVDNLRGVSEFSLNFLNDRVKVRASCNGLLCCSSIPDKGVFYVCNPVTREY 124

Query: 956  KMLPRTRERPMTRFHPDDEATLVGLGFDSSTSQFNVVLAGFYRPFGRRPLDSFICLVYDS 777
            ++LP++RER +TRF+PD EATLVGL  DS+  +FNVVLAG++R FG RP  SFICLV+DS
Sbjct: 125  RLLPKSRERHVTRFYPDGEATLVGLACDSAHQKFNVVLAGYHRMFGHRPDGSFICLVFDS 184

Query: 776  ATNMWRRSISSRTEEFTHMNKNQVVYSNGSLHWLTYSCLYILAFDLDNDIWRKILLPDQV 597
              N WR+ +S + + FTHMNKNQVV+ N +LHWLT S  YIL  DL  D+WRK+ LP  +
Sbjct: 185  ELNKWRKFVSFQDDHFTHMNKNQVVFVNIALHWLTASSTYILVLDLSCDVWRKMQLPYNL 244

Query: 596  VGGSGNRLHLLELDGSVSVVRISDSWMNIWVLKDYGREEWFEADRVSLRCIKGLVPSVFP 417
            + G+GNR++LL+LDG +SV++IS++WMNIWVLKDY ++EW   D+VSLRCI+G+VP +FP
Sbjct: 245  IYGTGNRIYLLDLDGCLSVIKISEAWMNIWVLKDYWKDEWCMVDKVSLRCIRGMVPGIFP 304

Query: 416  ISQTSEFVFLATQKQILEYHRKSRVWKEVYSVKNSFTYPLWFSAYAFRSTIVSCH 252
            ISQT E VFLAT KQIL YHRK+++WKE+YSVK   T PLWFSA+A+RST+ SC+
Sbjct: 305  ISQTGECVFLATHKQILVYHRKTQIWKEMYSVKYRSTLPLWFSAHAYRSTMFSCN 359


>ref|XP_002273848.1| PREDICTED: F-box protein At5g49610-like [Vitis vinifera]
          Length = 357

 Score =  487 bits (1253), Expect = e-135
 Identities = 230/357 (64%), Positives = 285/357 (79%)
 Frame = -3

Query: 1322 IENGFFPEEAILQILARLPIKPLFRFKCVCKFWYGLPSNKYFIQLYNQLSSNNPMVLVEI 1143
            + +G FPEE ILQILARLP+K +FR KCVC  WY L S+KYF++LYNQ+    P+VL+E+
Sbjct: 1    MNSGVFPEEVILQILARLPVKSVFRSKCVCTLWYKLCSDKYFVRLYNQVWVKKPVVLIEV 60

Query: 1142 IKSSCTQSSYIAVDRLRGVSEFSLEFLKDRVKVRASCNGLLCCASVPNKGVYYVCNPMTR 963
              S   +SS I VD LRGVSE SL+FLKDRVKVRASCNGLLCC+S+P+KGVYYV NP TR
Sbjct: 61   TDSLECKSSLICVDNLRGVSELSLDFLKDRVKVRASCNGLLCCSSIPDKGVYYVINPETR 120

Query: 962  DYKMLPRTRERPMTRFHPDDEATLVGLGFDSSTSQFNVVLAGFYRPFGRRPLDSFICLVY 783
            +Y++LP++RERP+TRF+PD EATL+GL  D S  ++NVVLAG +R FG+RP   FICLV+
Sbjct: 121  EYRLLPKSRERPVTRFYPDGEATLIGLACDLSGQKYNVVLAGNHRCFGQRPEKMFICLVF 180

Query: 782  DSATNMWRRSISSRTEEFTHMNKNQVVYSNGSLHWLTYSCLYILAFDLDNDIWRKILLPD 603
            DS +N WR+ +S + E+FTHMNKNQVV+ NGSLHWLT SC  +LA DLD ++W+KI LPD
Sbjct: 181  DSESNKWRKFVSLQDEQFTHMNKNQVVFLNGSLHWLTASCSCVLALDLDGEVWKKIKLPD 240

Query: 602  QVVGGSGNRLHLLELDGSVSVVRISDSWMNIWVLKDYGREEWFEADRVSLRCIKGLVPSV 423
            +V  GSGNR++LL+ DG +SV++ISD+ MNIWVLKDY   EW   DRVSL+CI+GLVP V
Sbjct: 241  EVGYGSGNRVYLLDYDGCLSVIQISDASMNIWVLKDYEMGEWNLVDRVSLQCIRGLVPGV 300

Query: 422  FPISQTSEFVFLATQKQILEYHRKSRVWKEVYSVKNSFTYPLWFSAYAFRSTIVSCH 252
            FPISQT E+VF AT KQ+L Y R   VWKE+YSVK SF  PLWFSA+AFR ++ SCH
Sbjct: 301  FPISQTGEYVFFATYKQVLVYRRNGGVWKEMYSVKGSFPLPLWFSAHAFRRSLFSCH 357


>ref|XP_003594683.1| F-box protein [Medicago truncatula] gi|217074110|gb|ACJ85415.1|
            unknown [Medicago truncatula] gi|355483731|gb|AES64934.1|
            F-box protein [Medicago truncatula]
          Length = 361

 Score =  484 bits (1247), Expect = e-134
 Identities = 230/356 (64%), Positives = 285/356 (80%), Gaps = 1/356 (0%)
 Frame = -3

Query: 1316 NGFFPEEAILQILARLPIKPLFRFKCVCKFWYGLPSNKYFIQLYNQLSSNNPMVLVEIIK 1137
            +G FP+E ++QILARLP+K LFR K VCK WY L  +KYFIQLYN +S  NPM+LVEI  
Sbjct: 6    DGIFPDEVVMQILARLPVKSLFRSKTVCKLWYRLTLDKYFIQLYNDVSRKNPMILVEISD 65

Query: 1136 SSC-TQSSYIAVDRLRGVSEFSLEFLKDRVKVRASCNGLLCCASVPNKGVYYVCNPMTRD 960
            S   ++SS I VD LRGV EFSL FL DRVKVRASCNGLLCC+S+P+ GVYYVCNP+TR+
Sbjct: 66   SLLESKSSLICVDNLRGVFEFSLNFLNDRVKVRASCNGLLCCSSIPDMGVYYVCNPVTRE 125

Query: 959  YKMLPRTRERPMTRFHPDDEATLVGLGFDSSTSQFNVVLAGFYRPFGRRPLDSFICLVYD 780
            +++LP++RERP+TRF+PD EATLVGL  DS+  +FNVVLAG +R FG RP   FICLV+D
Sbjct: 126  FRLLPKSRERPVTRFYPDGEATLVGLACDSAFQKFNVVLAGSHRTFGHRPDGKFICLVFD 185

Query: 779  SATNMWRRSISSRTEEFTHMNKNQVVYSNGSLHWLTYSCLYILAFDLDNDIWRKILLPDQ 600
            S  N WR+ IS + E FTHMNKNQVV+ N +LHWLT S  YIL  DL  DIWRK+ LP  
Sbjct: 186  SELNKWRKLISFQDEHFTHMNKNQVVFVNNALHWLTVSSSYILVLDLSCDIWRKMSLPYD 245

Query: 599  VVGGSGNRLHLLELDGSVSVVRISDSWMNIWVLKDYGREEWFEADRVSLRCIKGLVPSVF 420
             + G+GNR +LLELDG +SV++IS++WM IWVLKDY ++EW   D+VSLRCI+G+VP +F
Sbjct: 246  PIYGAGNRTYLLELDGCLSVIQISEAWMVIWVLKDYWKDEWCIVDKVSLRCIRGMVPGIF 305

Query: 419  PISQTSEFVFLATQKQILEYHRKSRVWKEVYSVKNSFTYPLWFSAYAFRSTIVSCH 252
            PISQT+E+VFLAT KQ+L Y R+S+VWKE+YSVK S T PLWFSA+A+RST+ SC+
Sbjct: 306  PISQTTEYVFLATHKQVLVYQRRSQVWKEMYSVKYSSTLPLWFSAHAYRSTMFSCN 361


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