BLASTX nr result

ID: Cimicifuga21_contig00010892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010892
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305768.1| predicted protein [Populus trichocarpa] gi|2...   113   3e-23
ref|XP_002522511.1| conserved hypothetical protein [Ricinus comm...   104   1e-20
ref|XP_004134677.1| PREDICTED: uncharacterized protein LOC101219...   102   5e-20
ref|NP_001143610.1| uncharacterized protein LOC100276323 [Zea ma...   100   2e-19
ref|XP_002438480.1| hypothetical protein SORBIDRAFT_10g020430 [S...    99   4e-19

>ref|XP_002305768.1| predicted protein [Populus trichocarpa] gi|222848732|gb|EEE86279.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score =  113 bits (282), Expect = 3e-23
 Identities = 60/116 (51%), Positives = 65/116 (56%), Gaps = 6/116 (5%)
 Frame = +2

Query: 95  MTDQQNPNPLGXXXXXXXXXXXXXXXXXXXG------QKPHFXXXXXXXXXXXXTLREQW 256
           M+D QNPNP                     G      QK HF            TLREQW
Sbjct: 1   MSDPQNPNPQNLPSSSASSSSNKNPTEIKPGNGNYSGQKVHFSNPPETTNPDPATLREQW 60

Query: 257 RFAIRQYSKWYSQAWGTAILAGMSFFALGWIIKGGNPLPSRQESDHQTSPPAPSKE 424
           RFAIRQYSKWYS AWGTAILAG+SFFALGWIIKG NPLPS +  D  +SP   +KE
Sbjct: 61  RFAIRQYSKWYSHAWGTAILAGVSFFALGWIIKGSNPLPSSRTDDSSSSPSNDAKE 116


>ref|XP_002522511.1| conserved hypothetical protein [Ricinus communis]
           gi|223538202|gb|EEF39811.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 115

 Score =  104 bits (260), Expect = 1e-20
 Identities = 48/83 (57%), Positives = 57/83 (68%)
 Frame = +2

Query: 185 GQKPHFXXXXXXXXXXXXTLREQWRFAIRQYSKWYSQAWGTAILAGMSFFALGWIIKGGN 364
           GQK H+            TLREQWRFAI+QYS+WYS AWGTAILAG+SFFALGWIIKG N
Sbjct: 31  GQKVHYPNPPDASNPDPATLREQWRFAIKQYSRWYSHAWGTAILAGLSFFALGWIIKGSN 90

Query: 365 PLPSRQESDHQTSPPAPSKEDPA 433
           PLPS +  D  ++   P  ++ A
Sbjct: 91  PLPSFKNDDSPSTSSPPEDDNKA 113


>ref|XP_004134677.1| PREDICTED: uncharacterized protein LOC101219058 [Cucumis sativus]
          Length = 116

 Score =  102 bits (254), Expect = 5e-20
 Identities = 48/83 (57%), Positives = 55/83 (66%)
 Frame = +2

Query: 185 GQKPHFXXXXXXXXXXXXTLREQWRFAIRQYSKWYSQAWGTAILAGMSFFALGWIIKGGN 364
           G K  F            TLR+QWRFAI+QYSKWYS AWGTAILAG+SFFALGW+IKG N
Sbjct: 32  GHKVRFPNPPEIQNPDPATLRDQWRFAIKQYSKWYSHAWGTAILAGISFFALGWVIKGSN 91

Query: 365 PLPSRQESDHQTSPPAPSKEDPA 433
           PLPSRQ+  +  S  A +    A
Sbjct: 92  PLPSRQDDSNSPSSSASTSAPEA 114


>ref|NP_001143610.1| uncharacterized protein LOC100276323 [Zea mays]
           gi|195623280|gb|ACG33470.1| hypothetical protein [Zea
           mays] gi|413924597|gb|AFW64529.1| hypothetical protein
           ZEAMMB73_863147 [Zea mays]
          Length = 115

 Score =  100 bits (249), Expect = 2e-19
 Identities = 43/63 (68%), Positives = 51/63 (80%)
 Frame = +2

Query: 239 TLREQWRFAIRQYSKWYSQAWGTAILAGMSFFALGWIIKGGNPLPSRQESDHQTSPPAPS 418
           TLR+QWRFA+RQYS+WYS AWGTAILAG +FFALGW++KG NPLPSR E  H     + +
Sbjct: 52  TLRDQWRFAVRQYSRWYSHAWGTAILAGAAFFALGWLVKGSNPLPSRAEPQHGAIGKSVA 111

Query: 419 KED 427
           KED
Sbjct: 112 KED 114


>ref|XP_002438480.1| hypothetical protein SORBIDRAFT_10g020430 [Sorghum bicolor]
           gi|241916703|gb|EER89847.1| hypothetical protein
           SORBIDRAFT_10g020430 [Sorghum bicolor]
          Length = 112

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 41/63 (65%), Positives = 52/63 (82%)
 Frame = +2

Query: 239 TLREQWRFAIRQYSKWYSQAWGTAILAGMSFFALGWIIKGGNPLPSRQESDHQTSPPAPS 418
           TLR+QWRFA+RQYS+WYS AWGTAILAG +FFALGW++KG NPLPSR E  H  +  + +
Sbjct: 49  TLRDQWRFAVRQYSRWYSHAWGTAILAGAAFFALGWLVKGSNPLPSRAEPQHDANGKSVA 108

Query: 419 KED 427
           +E+
Sbjct: 109 EEE 111


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