BLASTX nr result

ID: Cimicifuga21_contig00010829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010829
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_192761.1| uncharacterized protein [Arabidopsis thaliana] ...    74   4e-11
ref|XP_002865041.1| hypothetical protein ARALYDRAFT_920024 [Arab...    73   7e-11
ref|NP_173848.2| uncharacterized protein [Arabidopsis thaliana] ...    72   2e-10
gb|ABK28413.1| unknown [Arabidopsis thaliana]                          72   2e-10
ref|XP_002298142.1| predicted protein [Populus trichocarpa] gi|2...    64   3e-08

>ref|NP_192761.1| uncharacterized protein [Arabidopsis thaliana]
           gi|3695409|gb|AAC62809.1| T9A4.8 gene product
           [Arabidopsis thaliana] gi|4538952|emb|CAB39776.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|7267719|emb|CAB78146.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657457|gb|AEE82857.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 273

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 7/226 (3%)
 Frame = +3

Query: 3   IRQVEXXXXXXXXDLDVMTTAKILFAQTENGKRGFTFDHVWPILKDVEKWDYNPYK---- 170
           + Q+E        + D++  AK+L  Q E  KRGF FDHVWPILK +EK+  +  K    
Sbjct: 15  VNQIENKNPSGASEEDILNQAKMLLTQYEKYKRGFKFDHVWPILKGIEKFANDNMKTPPA 74

Query: 171 ---QNYETNLSQSSQHEALTYPSLGTPSSGDMNLDDEDLFVAQIPTVSSNHPTGRDQEKP 341
              +  +   S S      + PS G  +S D+N+D ED   +      S+ P G   +K 
Sbjct: 75  FQGEGRDVTSSSSFSINTESSPSPGM-NSIDLNMDSEDANFS-----LSSRPMG--LKKA 126

Query: 342 KRKKTTDNAHLVTNLMEHSREVSEMIKSSELKGNESLDKLDSDCDRKLNVMMLQAENERR 521
           KRK+ ++       L+E + ++ + I     + NE                      +R+
Sbjct: 127 KRKQQSEEQ--FKQLLEQNDKLIKAITKGTSERNEI---------------------QRQ 163

Query: 522 RLEYEKYDKDIKIMEKDVHSMTNPIQRSFFANLQAKIQAKWAHESQ 659
           ++E  +  ++ KI+  D++S+++P  R++  N + +I  K A  +Q
Sbjct: 164 KIEVARMKEENKILFADLNSISDPSSRAYVENERKRILEKRAQTNQ 209


>ref|XP_002865041.1| hypothetical protein ARALYDRAFT_920024 [Arabidopsis lyrata subsp.
           lyrata] gi|297310876|gb|EFH41300.1| hypothetical protein
           ARALYDRAFT_920024 [Arabidopsis lyrata subsp. lyrata]
          Length = 246

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 5/201 (2%)
 Frame = +3

Query: 54  MTTAKILFAQTENGKRGFTFDHVWPILKDVEKWDYN-----PYKQNYETNLSQSSQHEAL 218
           M  AK L  Q E  K+GF FDHVW +LKD+ K+  N     P   N E++++ S   ++ 
Sbjct: 35  MEKAKKLLVQVEKLKKGFKFDHVWNLLKDIPKFTDNVSVGIPDTPNTESDIASSPTSQS- 93

Query: 219 TYPSLGTPSSGDMNLDDEDLFVAQIPTVSSNHPTGRDQEKPKRKKTTDNAHLVTNLMEHS 398
             P +   SS  +NL  ED       + SS  P G  + K KRK    N   V  L+  +
Sbjct: 94  --PGM---SSFSINLSSED-----GGSNSSQRPIGSKKAKLKRKIAEGNNSSVDTLVSSN 143

Query: 399 REVSEMIKSSELKGNESLDKLDSDCDRKLNVMMLQAENERRRLEYEKYDKDIKIMEKDVH 578
           +++ + +K S     +S +  +           L+ +N+ ++L  ++  ++ KI+ KD+ 
Sbjct: 144 KQILDFLKESAATREKSYELAE-----------LRMQNQAKKLALKEMHEENKILLKDLD 192

Query: 579 SMTNPIQRSFFANLQAKIQAK 641
           ++ +   R +  + QA+I  K
Sbjct: 193 TIADSNTREYIRSEQARIIQK 213


>ref|NP_173848.2| uncharacterized protein [Arabidopsis thaliana]
           gi|9743328|gb|AAF97952.1|AC000103_2 F21J9.4 [Arabidopsis
           thaliana] gi|91805847|gb|ABE65652.1| hypothetical
           protein At1g24380 [Arabidopsis thaliana]
           gi|332192402|gb|AEE30523.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 293

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 7/226 (3%)
 Frame = +3

Query: 3   IRQVEXXXXXXXXDLDVMTTAKILFAQTENGKRGFTFDHVWPILKDVEKWDYNPYK---- 170
           + Q+E        + D++  AK+L  Q E  KRGF FDHVWPILK +EK+  +  K    
Sbjct: 35  VNQIENKNPSGASEEDILNQAKMLLTQYEKYKRGFKFDHVWPILKGIEKFANDNMKTPAA 94

Query: 171 ---QNYETNLSQSSQHEALTYPSLGTPSSGDMNLDDEDLFVAQIPTVSSNHPTGRDQEKP 341
              +  +   S S      + PS G  +S D+N+D ED   +      S+ P G   +K 
Sbjct: 95  FQGEGRDVTSSSSFSINTESSPSPGM-NSIDLNMDSEDANFS-----LSSRPMG--LKKA 146

Query: 342 KRKKTTDNAHLVTNLMEHSREVSEMIKSSELKGNESLDKLDSDCDRKLNVMMLQAENERR 521
           KRK+ ++       L+E + ++ + I     + NE                      +R+
Sbjct: 147 KRKQQSEEQ--FKQLLEQNDKLIKAITKGTSERNEI---------------------QRQ 183

Query: 522 RLEYEKYDKDIKIMEKDVHSMTNPIQRSFFANLQAKIQAKWAHESQ 659
           ++E  +  ++ KI+  D++S+++P   ++  N + +I  K A  +Q
Sbjct: 184 KIEVARMKEENKILFADLNSISDPSSSAYIENERKRILEKRAQTNQ 229


>gb|ABK28413.1| unknown [Arabidopsis thaliana]
          Length = 294

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 7/226 (3%)
 Frame = +3

Query: 3   IRQVEXXXXXXXXDLDVMTTAKILFAQTENGKRGFTFDHVWPILKDVEKWDYNPYK---- 170
           + Q+E        + D++  AK+L  Q E  KRGF FDHVWPILK +EK+  +  K    
Sbjct: 35  VNQIENKNPSGASEEDILNQAKMLLTQYEKYKRGFKFDHVWPILKGIEKFANDNMKTPAA 94

Query: 171 ---QNYETNLSQSSQHEALTYPSLGTPSSGDMNLDDEDLFVAQIPTVSSNHPTGRDQEKP 341
              +  +   S S      + PS G  +S D+N+D ED   +      S+ P G   +K 
Sbjct: 95  FQGEGRDVTSSSSFSINTESSPSPGM-NSIDLNMDSEDANFS-----LSSRPMG--LKKA 146

Query: 342 KRKKTTDNAHLVTNLMEHSREVSEMIKSSELKGNESLDKLDSDCDRKLNVMMLQAENERR 521
           KRK+ ++       L+E + ++ + I     + NE                      +R+
Sbjct: 147 KRKQQSEEQ--FKQLLEQNDKLIKAITKGTSERNEI---------------------QRQ 183

Query: 522 RLEYEKYDKDIKIMEKDVHSMTNPIQRSFFANLQAKIQAKWAHESQ 659
           ++E  +  ++ KI+  D++S+++P   ++  N + +I  K A  +Q
Sbjct: 184 KIEVARMKEENKILFADLNSISDPSSSAYIENERKRILEKRAQTNQ 229


>ref|XP_002298142.1| predicted protein [Populus trichocarpa]
           gi|224121110|ref|XP_002330906.1| predicted protein
           [Populus trichocarpa] gi|222845400|gb|EEE82947.1|
           predicted protein [Populus trichocarpa]
           gi|222872728|gb|EEF09859.1| predicted protein [Populus
           trichocarpa]
          Length = 192

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 5/188 (2%)
 Frame = +3

Query: 93  GKRGFTFDHVWPILKDVEKWDYNPYKQNYETNLSQSSQHEALTYPSL-GTPSSGDMNLDD 269
           GKR F  +H W IL+   KW +   +Q+  +N  Q S   A +  S   TP S  +  D 
Sbjct: 19  GKR-FQLEHCWVILRKEPKWQFERARQHQRSNKKQKSHVNASSASSAPSTPDSVSLGEDS 77

Query: 270 EDLFVAQIPTVSSNHPTGRD--QEKPKRKKTTDNA--HLVTNLMEHSREVSEMIKSSELK 437
           E       P +  + P G+   +E+ KRK+  D      VTNL++  R+    I      
Sbjct: 78  E-------PLIYQDRPIGQKAAKERLKRKQGKDKVGETTVTNLLQQFRDTLVEI------ 124

Query: 438 GNESLDKLDSDCDRKLNVMMLQAENERRRLEYEKYDKDIKIMEKDVHSMTNPIQRSFFAN 617
             E   K D     +   MM+Q   E++  E ++ +K+ +IM+ D+ ++ NPI  ++F N
Sbjct: 125 --EDQKKQDRKIMLEQQAMMIQQSQEKQ--ELDRIEKEEQIMKMDISNL-NPISAAYFQN 179

Query: 618 LQAKIQAK 641
            + ++  K
Sbjct: 180 KKLELMQK 187


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