BLASTX nr result

ID: Cimicifuga21_contig00010813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010813
         (1870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283810.1| PREDICTED: COP9 signalosome complex subunit ...   699   0.0  
ref|XP_002314240.1| predicted protein [Populus trichocarpa] gi|1...   698   0.0  
ref|XP_002532580.1| cop9 signalosome complex subunit, putative [...   698   0.0  
ref|XP_002330981.1| predicted protein [Populus trichocarpa] gi|2...   694   0.0  
emb|CBI32857.3| unnamed protein product [Vitis vinifera]              694   0.0  

>ref|XP_002283810.1| PREDICTED: COP9 signalosome complex subunit 2-like [Vitis vinifera]
          Length = 439

 Score =  699 bits (1805), Expect = 0.0
 Identities = 364/467 (77%), Positives = 380/467 (81%)
 Frame = +3

Query: 141  MGSDADMXXXXXXXXXXXXXXXXXXXXXXYYNSKGLVETDPKGALAGFSEVVGMESEKAE 320
            MGSDADM                      YYNSKGLVETDP+GALAGF+EVV ME EKAE
Sbjct: 1    MGSDADMEDYGFEYSEEEPEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVRMEPEKAE 60

Query: 321  WGFKALKQTVKLYYRLGKYKEMMEAYREMLTYIKSAVTRNYSEKCISNIMDFVSGSASQN 500
            WGFKALKQTVKLYYRLGKYKEMMEAYR MLTYIKSAVTRNYSEKCI+NIMDFVSGSASQN
Sbjct: 61   WGFKALKQTVKLYYRLGKYKEMMEAYRVMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN 120

Query: 501  FGLLEEFYQTTLKSLEEAKNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 680
            FGLL+EFYQTTLK+LEEAKNE                                       
Sbjct: 121  FGLLQEFYQTTLKALEEAKNERLWFKTNLKLCKIW------------------------- 155

Query: 681  XXXFDMGEYGRMNKILKELHRSCRKDDGSDDQKKGTQLLEVYAIEIQMYTETXXXXXXXX 860
               FDMGEYGRM+KILKELH+SCR++DG+DDQKKGTQLLEVYAIEIQMYTET        
Sbjct: 156  ---FDMGEYGRMSKILKELHKSCRREDGTDDQKKGTQLLEVYAIEIQMYTETKNNKKLKQ 212

Query: 861  XXXXALSIKSAIPHPRIMGIIRECGGKMHMAERQWVEAATDFFEAFKNYDEAGNQRRIQC 1040
                AL+IKSAIPHPRIMGII ECGGKMHMAERQW +AATDFFEAFKNYDEAGNQRRIQC
Sbjct: 213  LYQKALTIKSAIPHPRIMGIIHECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQC 272

Query: 1041 LKYLVLANMLMESTVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRT 1220
            LKYLVLANMLMES VNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRT
Sbjct: 273  LKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRT 332

Query: 1221 IMDDPFIRNYIEDLLKKIRTQVLLKLIKPYTRIRIPFISKELNVPENDVEQLLVSLILDN 1400
            IMDD FIRNYIEDLLK IRTQVLLKLIKPYTRIRIPFISKELNVPE DVEQLLVSLILDN
Sbjct: 333  IMDDLFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISKELNVPEEDVEQLLVSLILDN 392

Query: 1401 RIQGHIDQVNRLLERGDSSKGMKKFAAIDKWNTQLKSLYQTVSTRVG 1541
            RIQGHIDQVNRLLERGD SKGMKK+AA++KWNTQLKSLYQT+S RVG
Sbjct: 393  RIQGHIDQVNRLLERGDRSKGMKKYAAVEKWNTQLKSLYQTISNRVG 439


>ref|XP_002314240.1| predicted protein [Populus trichocarpa] gi|118481037|gb|ABK92472.1|
            unknown [Populus trichocarpa] gi|222850648|gb|EEE88195.1|
            predicted protein [Populus trichocarpa]
          Length = 439

 Score =  698 bits (1802), Expect = 0.0
 Identities = 362/466 (77%), Positives = 379/466 (81%)
 Frame = +3

Query: 141  MGSDADMXXXXXXXXXXXXXXXXXXXXXXYYNSKGLVETDPKGALAGFSEVVGMESEKAE 320
            MGSDADM                      YYNSKGLVETDP+GALAGF+EVV ME EKAE
Sbjct: 1    MGSDADMEDYGFEYSDEEPEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVSMEPEKAE 60

Query: 321  WGFKALKQTVKLYYRLGKYKEMMEAYREMLTYIKSAVTRNYSEKCISNIMDFVSGSASQN 500
            WGFKALKQTVKLYYRLGKYKEMMEAYREMLTYIKSAVTRNYSEKCI+NIMDFVSGSASQN
Sbjct: 61   WGFKALKQTVKLYYRLGKYKEMMEAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN 120

Query: 501  FGLLEEFYQTTLKSLEEAKNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 680
            FGLL+EFYQTTLK+LEEAKNE                                       
Sbjct: 121  FGLLQEFYQTTLKALEEAKNERLWFKTNLKLCKIW------------------------- 155

Query: 681  XXXFDMGEYGRMNKILKELHRSCRKDDGSDDQKKGTQLLEVYAIEIQMYTETXXXXXXXX 860
               FDMGEYGRM+KILKELH+SC+++DG+DDQKKG+QLLEVYAIEIQMYTET        
Sbjct: 156  ---FDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQ 212

Query: 861  XXXXALSIKSAIPHPRIMGIIRECGGKMHMAERQWVEAATDFFEAFKNYDEAGNQRRIQC 1040
                AL+IKSAIPHPRIMGIIRECGGKMHMAERQW EAATDFFEAFKNYDEAGNQRRIQC
Sbjct: 213  LYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWAEAATDFFEAFKNYDEAGNQRRIQC 272

Query: 1041 LKYLVLANMLMESTVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRT 1220
            LKYLVLANMLMES VNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRT
Sbjct: 273  LKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRT 332

Query: 1221 IMDDPFIRNYIEDLLKKIRTQVLLKLIKPYTRIRIPFISKELNVPENDVEQLLVSLILDN 1400
            IMDDPFIRNYIEDLLK +RTQVLLKLIKPYTRIRIPFISKELNVPE DVEQLLVSLILDN
Sbjct: 333  IMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDN 392

Query: 1401 RIQGHIDQVNRLLERGDSSKGMKKFAAIDKWNTQLKSLYQTVSTRV 1538
            RI GHIDQVNRLLERGD SKGMKK+ AI+KWN QL+SLYQTVS RV
Sbjct: 393  RIDGHIDQVNRLLERGDRSKGMKKYTAIEKWNAQLRSLYQTVSNRV 438


>ref|XP_002532580.1| cop9 signalosome complex subunit, putative [Ricinus communis]
            gi|223527689|gb|EEF29797.1| cop9 signalosome complex
            subunit, putative [Ricinus communis]
          Length = 439

 Score =  698 bits (1801), Expect = 0.0
 Identities = 361/466 (77%), Positives = 379/466 (81%)
 Frame = +3

Query: 141  MGSDADMXXXXXXXXXXXXXXXXXXXXXXYYNSKGLVETDPKGALAGFSEVVGMESEKAE 320
            MGSDADM                      YYNSKGLVETDP+ ALAGF+EVV ME EKAE
Sbjct: 1    MGSDADMEDYGFEYSDDEPEEQDVDIENQYYNSKGLVETDPEAALAGFAEVVSMEPEKAE 60

Query: 321  WGFKALKQTVKLYYRLGKYKEMMEAYREMLTYIKSAVTRNYSEKCISNIMDFVSGSASQN 500
            WGFKALKQTVKLYYRLGKYKEMM+AYREMLTYIKSAVTRNYSEKCI+NIMDFVSGSASQN
Sbjct: 61   WGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN 120

Query: 501  FGLLEEFYQTTLKSLEEAKNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 680
            FGLL+EFYQTTLK+LEEAKNE                                       
Sbjct: 121  FGLLQEFYQTTLKALEEAKNERLWFKTNLKLCKIW------------------------- 155

Query: 681  XXXFDMGEYGRMNKILKELHRSCRKDDGSDDQKKGTQLLEVYAIEIQMYTETXXXXXXXX 860
               FDMGEYGRM+KILKELH+SC+++DG+DDQKKG+QLLEVYAIEIQMYTET        
Sbjct: 156  ---FDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQ 212

Query: 861  XXXXALSIKSAIPHPRIMGIIRECGGKMHMAERQWVEAATDFFEAFKNYDEAGNQRRIQC 1040
                AL+IKSAIPHPRIMGIIRECGGKMHMAERQW EAATDFFEAFKNYDEAGNQRRIQC
Sbjct: 213  LYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWAEAATDFFEAFKNYDEAGNQRRIQC 272

Query: 1041 LKYLVLANMLMESTVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRT 1220
            LKYLVLANMLMES VNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRT
Sbjct: 273  LKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRT 332

Query: 1221 IMDDPFIRNYIEDLLKKIRTQVLLKLIKPYTRIRIPFISKELNVPENDVEQLLVSLILDN 1400
            IMDDPFIRNYIEDLLK +RTQVLLKLIKPYTRIRIPFISKELNVPE DVEQLLVSLILDN
Sbjct: 333  IMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDN 392

Query: 1401 RIQGHIDQVNRLLERGDSSKGMKKFAAIDKWNTQLKSLYQTVSTRV 1538
            RI GHIDQVNRLLERGD SKGMKK+ AIDKWNTQL+SLYQT+S RV
Sbjct: 393  RIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNTQLRSLYQTISNRV 438


>ref|XP_002330981.1| predicted protein [Populus trichocarpa] gi|222872773|gb|EEF09904.1|
            predicted protein [Populus trichocarpa]
          Length = 439

 Score =  694 bits (1792), Expect = 0.0
 Identities = 360/466 (77%), Positives = 378/466 (81%)
 Frame = +3

Query: 141  MGSDADMXXXXXXXXXXXXXXXXXXXXXXYYNSKGLVETDPKGALAGFSEVVGMESEKAE 320
            MGSDADM                      YYNSKGLVETDP+GALAGF+EVV ME EKAE
Sbjct: 1    MGSDADMEDYGFEYSDEEPEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVSMEPEKAE 60

Query: 321  WGFKALKQTVKLYYRLGKYKEMMEAYREMLTYIKSAVTRNYSEKCISNIMDFVSGSASQN 500
            WGFKALKQTVK+YYRLGKYKEMMEAYREMLTYIKSAVTRNYSEKCI+NIMDFVSGSASQN
Sbjct: 61   WGFKALKQTVKIYYRLGKYKEMMEAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN 120

Query: 501  FGLLEEFYQTTLKSLEEAKNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 680
            F LL+EFYQTTLK+LEEAKNE                                       
Sbjct: 121  FSLLQEFYQTTLKALEEAKNERLWFKTNLKLCKIW------------------------- 155

Query: 681  XXXFDMGEYGRMNKILKELHRSCRKDDGSDDQKKGTQLLEVYAIEIQMYTETXXXXXXXX 860
               F MGEYGRM+KILKELH+SC+++DG+DDQKKG+QLLEVYAIEIQMYTET        
Sbjct: 156  ---FGMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQ 212

Query: 861  XXXXALSIKSAIPHPRIMGIIRECGGKMHMAERQWVEAATDFFEAFKNYDEAGNQRRIQC 1040
                AL+IKSAIPHPRIMGIIRECGGKMHMAERQW EAATDFFEAFKNYDEAGNQRRIQC
Sbjct: 213  LYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWAEAATDFFEAFKNYDEAGNQRRIQC 272

Query: 1041 LKYLVLANMLMESTVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRT 1220
            LKYLVLANMLMES VNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRT
Sbjct: 273  LKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRT 332

Query: 1221 IMDDPFIRNYIEDLLKKIRTQVLLKLIKPYTRIRIPFISKELNVPENDVEQLLVSLILDN 1400
            IMDDPFIRNYIEDLLK +RTQVLLKLIKPYTRIRIPFISKELNVPE DVEQLLVSLILDN
Sbjct: 333  IMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDN 392

Query: 1401 RIQGHIDQVNRLLERGDSSKGMKKFAAIDKWNTQLKSLYQTVSTRV 1538
            RI GHIDQVNRLLERGD SKGMKK+ AI+KWNTQL+SLYQTVS RV
Sbjct: 393  RIDGHIDQVNRLLERGDRSKGMKKYTAIEKWNTQLRSLYQTVSNRV 438


>emb|CBI32857.3| unnamed protein product [Vitis vinifera]
          Length = 440

 Score =  694 bits (1791), Expect = 0.0
 Identities = 357/438 (81%), Positives = 373/438 (85%)
 Frame = +3

Query: 228  YYNSKGLVETDPKGALAGFSEVVGMESEKAEWGFKALKQTVKLYYRLGKYKEMMEAYREM 407
            YYNSKGLVETDP+GALAGF+EVV ME EKAEWGFKALKQTVKLYYRLGKYKEMMEAYR M
Sbjct: 31   YYNSKGLVETDPEGALAGFAEVVRMEPEKAEWGFKALKQTVKLYYRLGKYKEMMEAYRVM 90

Query: 408  LTYIKSAVTRNYSEKCISNIMDFVSGSASQNFGLLEEFYQTTLKSLEEAKNEXXXXXXXX 587
            LTYIKSAVTRNYSEKCI+NIMDFVSGSASQNFGLL+EFYQTTLK+LEEAKNE        
Sbjct: 91   LTYIKSAVTRNYSEKCINNIMDFVSGSASQNFGLLQEFYQTTLKALEEAKNERLWFKTNL 150

Query: 588  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDMGEYGRMNKILKELHRSCRKDDGS 767
                                              FDMGEYGRM+KILKELH+SCR++DG+
Sbjct: 151  KLCKIW----------------------------FDMGEYGRMSKILKELHKSCRREDGT 182

Query: 768  DDQKKGTQLLEVYAIEIQMYTETXXXXXXXXXXXXALSIKSAIPHPRIMGIIRECGGKMH 947
            DDQKKGTQLLEVYAIEIQMYTET            AL+IKSAIPHPRIMGII ECGGKMH
Sbjct: 183  DDQKKGTQLLEVYAIEIQMYTETKNNKKLKQLYQKALTIKSAIPHPRIMGIIHECGGKMH 242

Query: 948  MAERQWVEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESTVNPFDGQEAKPYKND 1127
            MAERQW +AATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMES VNPFDGQEAKPYKND
Sbjct: 243  MAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKND 302

Query: 1128 PEILAMTNLIAAYQRNEILEFEKILKSNRRTIMDDPFIRNYIEDLLKKIRTQVLLKLIKP 1307
            PEILAMTNLIAAYQRNEILEFEKILKSNRRTIMDD FIRNYIEDLLK IRTQVLLKLIKP
Sbjct: 303  PEILAMTNLIAAYQRNEILEFEKILKSNRRTIMDDLFIRNYIEDLLKNIRTQVLLKLIKP 362

Query: 1308 YTRIRIPFISKELNVPENDVEQLLVSLILDNRIQGHIDQVNRLLERGDSSKGMKKFAAID 1487
            YTRIRIPFISKELNVPE DVEQLLVSLILDNRIQGHIDQVNRLLERGD SKGMKK+AA++
Sbjct: 363  YTRIRIPFISKELNVPEEDVEQLLVSLILDNRIQGHIDQVNRLLERGDRSKGMKKYAAVE 422

Query: 1488 KWNTQLKSLYQTVSTRVG 1541
            KWNTQLKSLYQT+S RVG
Sbjct: 423  KWNTQLKSLYQTISNRVG 440


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