BLASTX nr result

ID: Cimicifuga21_contig00010727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010727
         (1222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31056.3| unnamed protein product [Vitis vinifera]              105   2e-20
ref|XP_002330556.1| predicted protein [Populus trichocarpa] gi|2...    96   1e-17
emb|CAA75349.1| ERT2 [Arabidopsis thaliana]                            87   9e-15
ref|NP_193820.1| ethylene-responsive/regulated nuclear protein [...    87   9e-15
ref|XP_002867871.1| hypothetical protein ARALYDRAFT_492798 [Arab...    86   2e-14

>emb|CBI31056.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  105 bits (263), Expect = 2e-20
 Identities = 66/184 (35%), Positives = 97/184 (52%), Gaps = 16/184 (8%)
 Frame = -2

Query: 1065 MPLPWKKKSNKINRVSRFVNEIRASKRGESLVLQPGFPTSLIDLIVKNRDRLXXXXXXXX 886
            MPLPWK    ++ R+SRFV ++++ KRG SLV++ GFPTSLIDL VKNRDRL        
Sbjct: 49   MPLPWKNA--RVGRISRFVADLQSPKRGGSLVVETGFPTSLIDLFVKNRDRLKKPRKRRS 106

Query: 885  XXXXXXXXXXXSFEEIESTPSTPLAPLILNSISTLLAESDSSDSGKEICVLKCEEQEL-- 712
                            +  P  P+ P         +    SSDS  EI  ++CEE+E+  
Sbjct: 107  RVS-------------DPVPQQPVEP---QRRPESVQAPASSDSFSEIRSVECEEEEIGG 150

Query: 711  --------------KCIQAPLTNRIFIICIQLFAILILALGTKKLAIGVTLSTFILMFLE 574
                          + ++ P    + +  +++  ++ILALGTKKLA+G+T+S F+L+FLE
Sbjct: 151  IDGGSLVDGGGEVEESVRRPSGRGVTVAVLKMSVVVILALGTKKLAVGITMSAFLLLFLE 210

Query: 573  VLLK 562
               K
Sbjct: 211  YAAK 214


>ref|XP_002330556.1| predicted protein [Populus trichocarpa] gi|222872114|gb|EEF09245.1|
            predicted protein [Populus trichocarpa]
          Length = 487

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 75/266 (28%), Positives = 124/266 (46%), Gaps = 32/266 (12%)
 Frame = -2

Query: 1065 MPLPWKKKSNKINRVSRFVNEIRASKRGESLVLQPGFPTSLIDLIVKNRDRLXXXXXXXX 886
            MP PWKK  +K+ R SR V ++++ KRG SLV++ GFPTSL+DL VKNR+RL        
Sbjct: 1    MPFPWKK--DKVARFSRIVADLQSPKRGNSLVVETGFPTSLVDLFVKNRERLKKPTGKKK 58

Query: 885  XXXXXXXXXXXSFEE------------------------IESTPSTPLAPLILNSISTLL 778
                         EE                        +E+  S  +  L+   +  + 
Sbjct: 59   KKKKRQQQLQEVEEELVISDPIFVSSSIELVDSPGPIQNLENMESFDVCDLVSQLLPVVE 118

Query: 777  AESDSSDSGKEICVLKCEEQELKCIQAPLTNRIFIICIQLFAILILALGTKKLAIGVTLS 598
             + D  D      V   +  + KC       R+  + +++F +++L L TKKL +G+T+S
Sbjct: 119  DDEDVEDVDDVEDVDDVKVTDKKCWNEK-EKRLLFVVLKMFLVVVLGLSTKKLVVGITMS 177

Query: 597  TFILMFLEVLLKR----LKVSIDFEKGKSLTGVEESNNTVVTNFVEECNSLIEENQVKEI 430
             F+L+FLE + K     LK  ++ E    L     S+  ++   V +C+   +E  ++EI
Sbjct: 178  AFVLIFLEYVGKHVLCFLKPCLNVEIVLELFVERVSSAFLMLKGVRKCDDSRKELIIQEI 237

Query: 429  DL--DLGKNDCG--QKMEVLKDCEET 364
            +   D+G + C   + +E+    EET
Sbjct: 238  EQEEDVGIDSCDLIETLEMKSSLEET 263


>emb|CAA75349.1| ERT2 [Arabidopsis thaliana]
          Length = 407

 Score = 87.0 bits (214), Expect = 9e-15
 Identities = 64/181 (35%), Positives = 91/181 (50%), Gaps = 11/181 (6%)
 Frame = -2

Query: 1065 MPLPWKKKSNKINRVSRFVNEIRAS-KRGESLVLQPGFPTSLIDLIVKNRDRLXXXXXXX 889
            MPLPWKK  +K +R+SRFV++ + S K G SLV++ GFPTSLIDL VKNRDRL       
Sbjct: 1    MPLPWKK--SKSSRISRFVSDFQQSPKHGGSLVVETGFPTSLIDLFVKNRDRLKKQSSKR 58

Query: 888  XXXXXXXXXXXXSFEEIESTPSTPLAPLILNSISTLLAESDSSDSGKEICVLKCEEQELK 709
                                 S      + + +   L   DS        V K EE  + 
Sbjct: 59   NNKNNKAQTETRVLSPPPPHMSLQRRMSLPSKLDPALVTEDSP------LVRKIEETSVP 112

Query: 708  CI--QAPLTNR--------IFIICIQLFAILILALGTKKLAIGVTLSTFILMFLEVLLKR 559
             I  +    +R        + ++  ++F + +LAL TKKLA+G+TLS F L+FLE+ + R
Sbjct: 113  EIIHEDDGGHRGGGGGGCVLIVVVFKVFMVAVLALSTKKLAVGITLSAFALLFLELAVAR 172

Query: 558  L 556
            +
Sbjct: 173  V 173


>ref|NP_193820.1| ethylene-responsive/regulated nuclear protein [Arabidopsis thaliana]
            gi|5262778|emb|CAB45883.1| ethylene-regulated transcript
            2 (ERT2) [Arabidopsis thaliana]
            gi|7268884|emb|CAB79088.1| ethylene-regulated transcript
            2 (ERT2) [Arabidopsis thaliana]
            gi|26452095|dbj|BAC43137.1| putative ethylene-regulated
            transcript 2 ERT2 [Arabidopsis thaliana]
            gi|332658971|gb|AEE84371.1| ethylene-responsive/regulated
            nuclear protein [Arabidopsis thaliana]
          Length = 405

 Score = 87.0 bits (214), Expect = 9e-15
 Identities = 64/181 (35%), Positives = 91/181 (50%), Gaps = 11/181 (6%)
 Frame = -2

Query: 1065 MPLPWKKKSNKINRVSRFVNEIRAS-KRGESLVLQPGFPTSLIDLIVKNRDRLXXXXXXX 889
            MPLPWKK  +K +R+SRFV++ + S K G SLV++ GFPTSLIDL VKNRDRL       
Sbjct: 1    MPLPWKK--SKSSRISRFVSDFQQSPKHGGSLVVETGFPTSLIDLFVKNRDRLKKQSSKR 58

Query: 888  XXXXXXXXXXXXSFEEIESTPSTPLAPLILNSISTLLAESDSSDSGKEICVLKCEEQELK 709
                                 S      + + +   L   DS        V K EE  + 
Sbjct: 59   NNKNNKAQTETRVLSPPPPHMSLQRRMSLPSKLDPALVTEDSP------LVRKIEETSVP 112

Query: 708  CI--QAPLTNR--------IFIICIQLFAILILALGTKKLAIGVTLSTFILMFLEVLLKR 559
             I  +    +R        + ++  ++F + +LAL TKKLA+G+TLS F L+FLE+ + R
Sbjct: 113  EIIHEDDGGHRGGGGGGCVLIVVVFKVFMVAVLALSTKKLAVGITLSAFALLFLELAVAR 172

Query: 558  L 556
            +
Sbjct: 173  V 173


>ref|XP_002867871.1| hypothetical protein ARALYDRAFT_492798 [Arabidopsis lyrata subsp.
            lyrata] gi|297313707|gb|EFH44130.1| hypothetical protein
            ARALYDRAFT_492798 [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 30/200 (15%)
 Frame = -2

Query: 1065 MPLPWKKKSNKINRVSRFVNEIRAS-KRGESLVLQPGFPTSLIDLIVKNRDRLXXXXXXX 889
            MPLPWKK  +K +R+SRFV++++ S K G SLV++ GFPTSLIDL VKNRDRL       
Sbjct: 1    MPLPWKK--SKSSRISRFVSDLQQSPKHGGSLVVETGFPTSLIDLFVKNRDRLKKQSSKR 58

Query: 888  XXXXXXXXXXXXSFEEIESTP------STPLAPLILNSISTLLAESDSSDSGKE-ICVLK 730
                           + ++ P      S P  PL L    +L ++ D +   ++   V K
Sbjct: 59   NNKNNKAQTT----AQTQTVPTKRRVLSPPPPPLSLQRRMSLPSKLDPALVTEDPPLVSK 114

Query: 729  CEEQELK----------------------CIQAPLTNRIFIICIQLFAILILALGTKKLA 616
             EE  +                       C+       + ++  ++F + +LAL TKKLA
Sbjct: 115  IEESFIPENRHDGEDDGGNGGNRGGGGGGCV-------LMVVVFKVFMVAVLALSTKKLA 167

Query: 615  IGVTLSTFILMFLEVLLKRL 556
            +G+TLS F L+FLE+ + R+
Sbjct: 168  VGITLSAFSLLFLELAVARV 187


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