BLASTX nr result
ID: Cimicifuga21_contig00010718
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00010718
(1243 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul... 125 3e-26
ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|3554... 124 7e-26
ref|XP_002319944.1| f-box family protein [Populus trichocarpa] g... 115 2e-23
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 115 3e-23
ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2... 113 1e-22
>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
[Medicago truncatula]
Length = 467
Score = 125 bits (313), Expect = 3e-26
Identities = 116/424 (27%), Positives = 206/424 (48%), Gaps = 24/424 (5%)
Frame = +2
Query: 38 DRLSHLPDPIRSHIVSLLPTRDAIRTSVLSSRWRYTCSSLPKLEFNQFRYIIRKSAKYKK 217
D +S LP+ I +I+S L T +A+RTS+L+++WRY + LP +F S K
Sbjct: 23 DMISDLPEGILYYILSRLSTEEAVRTSILATKWRYLWTQLPVFDFRD------SSPKRNS 76
Query: 218 DFKNCIYNTLSR--HDETDIERFSLYVRVDGEHITSLDLNNWITAVVQHNVQHLLLWVFP 391
+C+ + + + H I++ L++ + + + +++ +++ + H+V L L +
Sbjct: 77 KSPDCLVDLVDQLLHKSNRIKK--LFIELPVTIVDAGKVSSMLSSALMHDVHDLTLNLES 134
Query: 392 KNPE-KIPFSFFTCGSLRNLEL-YEIELQLPAIIRFPMLKYLLLHSVSFDDDNVMNILFS 565
+N +P SF SL L++ + +P I FP LK L V+F ++ LF
Sbjct: 135 ENSRFVLPNSFSASRSLTKLDIVFGFLDSVPDGICFPSLKILSFAHVTFTNEKSAQRLF- 193
Query: 566 RSTCPVLEDLEIVGCDQIH-TLSIVIPSLKYLKL-FAISDLHK----FELSIPTLQEIIY 727
S CPVL+DL C ++ +S+ IP+LK L + F S L + F++ L + Y
Sbjct: 194 -SGCPVLQDLSFEKCYWVNINISVAIPTLKKLDIFFRSSSLDRNSCMFKIDAVNLLSLSY 252
Query: 728 IGVP-LDVSIETLSSLRNA-----LFEVTLPSSHPNQDASKILFELRNVNTLWLKSFFIE 889
P ++ + +S+ +A F V H A ++ L +V +L L I+
Sbjct: 253 KSNPTINCFLVNSTSIVDANIDLGFFCVQNNELHVAVFAIELFSRLGSVESLRLSDQTIQ 312
Query: 890 FLSREQHFFAKVHTLSSSLKQLHLQILRAKRHVQVISFLIRSFPQLQTLHIYFEDM---- 1057
L+ + + +H L S L++ +V++ ++R P+L+ LHIY +
Sbjct: 313 CLNYAK---SALHLLPSFKNLTRLEVHFDDPSCEVLADILRKSPKLEFLHIYGVHLVSCS 369
Query: 1058 ----QGYDSDQEENWRADDLPGQNVFMIRNLRRVEIKYFRGTDSELDLVRYLFESATILE 1225
Y S E+W +D LP +L+ +I FRG ++E+ LV++L E+ T+L
Sbjct: 370 RFSSGSYLSLDSEDWTSDSLP---CCFKSSLKSCDISDFRGDEAEIRLVKFLLENVTLLR 426
Query: 1226 EMNI 1237
EMNI
Sbjct: 427 EMNI 430
>ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|355488922|gb|AES70125.1|
F-box family-3 [Medicago truncatula]
Length = 642
Score = 124 bits (310), Expect = 7e-26
Identities = 117/426 (27%), Positives = 206/426 (48%), Gaps = 25/426 (5%)
Frame = +2
Query: 35 MDRLSHLPDPIRSHIVSLLPTRDAIRTSVLSSRWRYTCSSLPKLEFNQFRYIIRKSAKYK 214
+D +S LP+ + HI+SLLPT+D +RTS+L+ +W++ + L F FR + S + +
Sbjct: 181 IDMISDLPEAVLLHILSLLPTKDVVRTSILAKKWKHLWTYLSAFHFETFRRLNESSLQNQ 240
Query: 215 KDFKNCIYNTLSR--HDETDIERFSLYV---RVDGEHITSLDLNNWITAVVQHNVQHLLL 379
K+ NC+ + + R H T IER + + +D + ++S+ I++ H +Q+L L
Sbjct: 241 KNKANCLLDLVGRLMHKSTRIERLGVQIFRSSIDTDKVSSI-----ISSAANHKLQYLDL 295
Query: 380 WVFPKNPE-KIPFSFFTCGSLRNLEL-YEIELQLPAIIRFPMLKYLLLHSVSFDDDNVMN 553
+ +N +P SF SL L L + L +P+ I FP+LK L++ +V+F ++N
Sbjct: 296 SLGDRNDNFVLPHSFPAFESLNELRLGLQFTLHIPSGICFPILKTLVVTNVTFANENSAQ 355
Query: 554 ILFSRSTCPVLEDLEIVGC--DQIHTLSIVIPSLK-----YLKLFAISD-LHKFELSIPT 709
LF S CPVL++LE+ C + I+ +S+ I +L+ YL L D + K ++
Sbjct: 356 QLF--SGCPVLQELELDNCYWEHINQISLSISTLRKLTISYLMLCVDYDHIMKLKIDAVN 413
Query: 710 LQEIIYIGVP-LDVSIETLSSLRNALFEVTLPSSHPNQDASKILFEL---------RNVN 859
L + I P ++V L+SL +A + H A++ EL +N
Sbjct: 414 LLSLYCICNPIIEVIPVNLTSLVDAFIFLGYVYPHDEPYAAQCSIELLKGLGSVKSLKLN 473
Query: 860 TLWLKSFFIEFLSREQHFFAKVHTLSSSLKQLHLQILRAKRHVQVISFLIRSFPQLQTLH 1039
+ L SF+ + H +L L++ + ++ ++R P+L+ L
Sbjct: 474 DIILMSFYHTLDNLHLHLLPL--PTFYNLTHLYVCSVSPGNACALVMDILRKTPKLEDLT 531
Query: 1040 IYFEDMQGYDSDQEENWRADDLPGQNVFMIRNLRRVEIKYFRGTDSELDLVRYLFESATI 1219
I + DSD + + LP +L+R+ F G E+ V ++ E+A
Sbjct: 532 IPGVVLNYLDSD---DLILNSLP---CCFKSSLKRLCFLNFHGNVHEIKFVTFILENAPY 585
Query: 1220 LEEMNI 1237
LEE+ I
Sbjct: 586 LEEIKI 591
>ref|XP_002319944.1| f-box family protein [Populus trichocarpa]
gi|222858320|gb|EEE95867.1| f-box family protein [Populus
trichocarpa]
Length = 511
Score = 115 bits (288), Expect = 2e-23
Identities = 131/462 (28%), Positives = 196/462 (42%), Gaps = 60/462 (12%)
Frame = +2
Query: 32 NMDRLSHLPDPIRSHIVSLLPTRDAIRTSVLSSRWRYTCSSLPKLEFNQFR--YIIRKSA 205
++DR+S LPD I HI+ LLP + +TSVLS RWR SS P L+F I +
Sbjct: 22 DIDRISDLPDAILHHILLLLPLKSIAQTSVLSQRWRSLWSSFPDLDFTTMNPSKAICSTR 81
Query: 206 KYKK-------DFKNCIYNTLSRHDETDIERFSLYVRVDGEHITSLDLNNWITAVVQHNV 364
K K DF + +H + RF H++ LN I ++ NV
Sbjct: 82 KLKSKRWWPSMDFIANVLALRDKHSDLRALRFR-------AHLSFSHLNGLIRRAIRCNV 134
Query: 365 QHLLLWVFPKNPEKIPFSFFTCGSLRNLEL---YEIELQLPA---IIRFPMLKYLLLHSV 526
Q L + V + P T SLR L+L Y LP+ I FP L L L V
Sbjct: 135 QELDVEVATGDYFNFPRGVITSESLRVLKLRSRYPGFRLLPSSVMTIGFPSLHTLSLSLV 194
Query: 527 SFDDDNVMNILFSRST---------------------CPVLEDLEIVGCDQIHTLSIVIP 643
+ + + LF+ S+ C LEDL I C Q+H+L I
Sbjct: 195 ILYEQSSLLDLFTESSFPCLKNLNLDACFGMKHLKVCCRALEDLTIENCFQLHSLDICSA 254
Query: 644 SLKYLKLF----AISDLHKFELSIPTLQEII--YIGVPLDVSIETLSSLRNALFEVTLPS 805
L+ L++ A SD F+++ P L+ I Y + S+ L+SL A V
Sbjct: 255 KLENLRVASCFDAYSDKTWFKVNAPRLRGISWEYNSITASSSLVNLTSLHEA--SVGFSL 312
Query: 806 SHPNQDASKI------LFELRNVNTLWLKSFFIEFLSREQHFFAKVHTLSSSLKQLHLQI 967
H N K+ L L +V++L L S +E LS + +H ++LK L L
Sbjct: 313 LHENLSVEKLQSVCNFLSGLSHVHSLTLDSQCVEILSNKNDIINLLHPF-NNLKVLELHT 371
Query: 968 LRAKRHVQVISFLIRSFPQLQTLHI------------YFEDMQGYDSDQEENWRADDLPG 1111
K +V ++FL RS P L TL + + D+ + EE + L
Sbjct: 372 GFEKNNVPGLAFLFRSSPTLHTLILKIINDFKTERRQWNRDLWDLSTSAEEQYWESQLQA 431
Query: 1112 QNVFMIRNLRRVEIKYFRGTDSELDLVRYLFESATILEEMNI 1237
F + +L+ V+I F ++E+ L ++L + L+EM +
Sbjct: 432 LRPF-LDHLKVVKIHGFLECENEVSLAKFLLKHGKDLQEMTL 472
>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
Length = 607
Score = 115 bits (287), Expect = 3e-23
Identities = 122/437 (27%), Positives = 208/437 (47%), Gaps = 34/437 (7%)
Frame = +2
Query: 29 QNMDRLSHLPDPIRSHIVSLLPTRDAIRTSVLSSRWRYTCSSLPKLEFNQFRYIIRKSAK 208
++ D +S+LPD + HI+S LPT+ A+ TS+LS RWRY +S+P L+F+ ++ +
Sbjct: 7 ESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLV 66
Query: 209 YKKD----FKNCIYNTLSRHDETDIERFSLYVRVDGEHITSLD-LNNWITAVVQHNVQHL 373
++ F+N + L + + I++F L G +LD + +WI ++ VQ L
Sbjct: 67 ELEERIIMFQNFVDGVLRHSEVSCIKKFRL-----GYRDNNLDSVYSWICIALERRVQEL 121
Query: 374 LLWVFPKNPEKIPFSFFTCGSLRNLEL-YEIELQLPAIIRFPMLKYLLLHSVSF-DDDNV 547
L + ++P FF C +L ++L + L +P + P LK L L SV + DDD++
Sbjct: 122 DLHLLIDWRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSI 181
Query: 548 MNILFSRSTCPVLEDL--EIVGCDQIHTLSIVIPSLKYLKLFAISD--LHKFE------- 694
+L S CPVLE+L E D +++ PSLK L++F +D H +E
Sbjct: 182 QKLL---SGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYK 238
Query: 695 --LSIPTLQEI-IYIGVPLDVSIETLSSLRNALFEVTLPSSHPNQDAS-----------K 832
+ P L+ + I + D ++ L SL A +V S + +
Sbjct: 239 VVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYE 298
Query: 833 ILFELRNVNTLWLKSFFIEFLSREQHFFAKVHTLSSSLKQLHLQILRAKRHVQVISFLIR 1012
+L + NV L L ++ LS + K+ T + + L I + + +
Sbjct: 299 LLGRISNVKCLSLTGVTLDSLSGTIGDY-KLPTFHNMTRLEFLFI--GGFNWDFLPNFLH 355
Query: 1013 SFPQLQTLHIYFEDMQGYDSDQ-EENWRADDLPGQ-NVFMIRNLRRVEIKYFRGTDSELD 1186
S P L+ L I GY ++ E W +P Q ++ +L+ +EI+ G D EL+
Sbjct: 356 SSPNLEALVI----ETGYTNELIPEGWL---MPLQVPACLVLHLKEIEIRRIVGEDYELE 408
Query: 1187 LVRYLFESATILEEMNI 1237
V YL ++A +L++M I
Sbjct: 409 AVEYLLKNAEVLQQMTI 425
>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
predicted protein [Populus trichocarpa]
Length = 416
Score = 113 bits (282), Expect = 1e-22
Identities = 110/414 (26%), Positives = 190/414 (45%), Gaps = 13/414 (3%)
Frame = +2
Query: 35 MDRLSHLPDPIRSHIVSLLPTRDAIRTSVLSSRWRYTCSSLPKLEFNQFRYIIRKSAK-- 208
+DR+S LP + I+S+LP RDA+RTS LS +WRY S +P L F+ I +
Sbjct: 5 LDRISSLPGHVLDQILSVLPIRDAVRTSALSRKWRYQWSQIPHLVFDTQCASITSQDQTI 64
Query: 209 YKKDFKNCIYNTLSRHDETDIERFSLYVRVDGEHITSLDLNNWITAVVQHNVQHLLLWVF 388
K + N I N L H+ I +F L R + + D++ WI + + + + +L ++
Sbjct: 65 AKNNLVNIIDNVLLLHN-GPIYKFKLSHR---DLLGVSDIDRWILHLSRGSTKEFVLEIW 120
Query: 389 PKNPEKIPFSFFTCGSLRNLELYEIELQLPAIIR-FPMLKYLLLHSVSFDDDNVMNILFS 565
K+P F+ +L +LEL+ L+ P + F LK L L V+ + N++
Sbjct: 121 KGQRYKLPSCLFSFENLTHLELFNCLLKPPPAFKGFRNLKSLDLQHVTLAQEVFENLI-- 178
Query: 566 RSTCPVLEDLEIVGCDQIHTLSIVIPSLKYLKLFAISDLHKF-ELSIPTLQEI-IYIGVP 739
S+C +LE L ++ D L I P+L++ + I D F S+ TL I +Y V
Sbjct: 179 -SSCALLERLTLMNFDGFTHLKINAPNLQFFDIGGIFDDVSFHNTSLLTLVSIGLYANVK 237
Query: 740 LDVSIETLSSLRNALFEVTLPSSHPNQDASKILFELRNVNTLWLKSFFIEFLSREQHFFA 919
D + SS + F V LP ++ L ++S+FI++L+
Sbjct: 238 NDRHVSRGSSSKLLRFFVNLP----------------HLRRLEIQSYFIKYLA------- 274
Query: 920 KVHTLSSSLKQLHLQILRAKRHVQVISF--------LIRSFPQLQTLHIYFEDMQGYDSD 1075
+ + S L + + + + F +++S P LQ + + + D +
Sbjct: 275 -ISKVPSRLPKPCMDLNYISIRINFNDFEENSAALCILKSCPNLQEIEMLGRPEEQADVE 333
Query: 1076 QEENWRADDLPGQNVFMIRNLRRVEIKYFRGTDSELDLVRYLFESATILEEMNI 1237
+ + DD Q + LR V+I G SELD +++L ++ +LE+M +
Sbjct: 334 PQTGFWGDD---QWKCLFGQLRLVKIVGISGIRSELDCIKFLLSNSPVLEQMTV 384