BLASTX nr result

ID: Cimicifuga21_contig00010717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010717
         (1113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311372.1| predicted protein [Populus trichocarpa] gi|2...   310   3e-82
ref|XP_002273724.1| PREDICTED: uncharacterized protein LOC100243...   306   6e-81
ref|XP_003546305.1| PREDICTED: uncharacterized protein LOC100790...   283   5e-74
ref|XP_002885189.1| hypothetical protein ARALYDRAFT_318480 [Arab...   283   5e-74
ref|NP_566568.1| Translation elongation factor EF1B/ribosomal pr...   280   6e-73

>ref|XP_002311372.1| predicted protein [Populus trichocarpa] gi|222851192|gb|EEE88739.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score =  310 bits (795), Expect = 3e-82
 Identities = 160/248 (64%), Positives = 187/248 (75%), Gaps = 10/248 (4%)
 Frame = +3

Query: 21  TASSPTSFHNKTSHCLRETRFFKTQISCLISPNGYSSPRPFSSRKL--EAKSRKSVIAES 194
           TA+ PT  H   SH ++    F             S    FS+R L      RKSVI E+
Sbjct: 8   TATFPTPKHRVFSHSIQNKSLFIA-----------SGCHSFSARPLFLSLGLRKSVIVEA 56

Query: 195 KR--------KKKVDSHSFVVKPDEATGPFPEAVLLKEKKVQEDGRVLPEFADDEEEKLF 350
           K+        K K D+HSFV KPDEA GPFPEA+LLKEKK QEDGRVLPEFAD EEEKLF
Sbjct: 57  KKSNKNNNNKKNKQDTHSFVAKPDEAIGPFPEAILLKEKKAQEDGRVLPEFADAEEEKLF 116

Query: 351 ESLNLQLESDLNLQQMRHYEVVYLIHEDHKEEVGSVNSKVEEFIKERKGRIWRFSDWGLR 530
           E LNL+L+S+L ++++RHYEVVYLIHE H EEVGS+N KV++F++E+KGRIWRF+DWG+R
Sbjct: 117 EFLNLELQSELKVERLRHYEVVYLIHEKHDEEVGSLNEKVQDFVREKKGRIWRFNDWGMR 176

Query: 531 RLAYKIKKAKNAHYILMNFELEASLINDFKSLLDKDERVIRHLVIKRDNAITEACPPPLE 710
           RLAYKI+KAKNAHYILMNFELEA  INDFK++LDKDERVIRHLVIKRD AITE CPPP E
Sbjct: 177 RLAYKIQKAKNAHYILMNFELEARWINDFKNMLDKDERVIRHLVIKRDEAITEDCPPPPE 236

Query: 711 FHTLRAGM 734
           FHTL+ GM
Sbjct: 237 FHTLQGGM 244


>ref|XP_002273724.1| PREDICTED: uncharacterized protein LOC100243195 [Vitis vinifera]
           gi|296083213|emb|CBI22849.3| unnamed protein product
           [Vitis vinifera]
          Length = 301

 Score =  306 bits (784), Expect = 6e-81
 Identities = 156/215 (72%), Positives = 181/215 (84%), Gaps = 2/215 (0%)
 Frame = +3

Query: 93  QISCLISPNGYSSPRPFSSRKLEAKSRKSVIAESKRKKK--VDSHSFVVKPDEATGPFPE 266
           Q   L    GYSS    S+ +L    RKSV+AE+K++KK  VD+H+FV KPDEATG FPE
Sbjct: 31  QTPFLTFSKGYSS---ISANRL----RKSVVAEAKKRKKDSVDAHNFVPKPDEATGVFPE 83

Query: 267 AVLLKEKKVQEDGRVLPEFADDEEEKLFESLNLQLESDLNLQQMRHYEVVYLIHEDHKEE 446
           AVLLKEKK QEDG  LPEFAD EEE+L+E LNLQLESDLN+++MRHYEVVYLIHE H EE
Sbjct: 84  AVLLKEKKAQEDGSFLPEFADAEEEELYEFLNLQLESDLNVERMRHYEVVYLIHEKHDEE 143

Query: 447 VGSVNSKVEEFIKERKGRIWRFSDWGLRRLAYKIKKAKNAHYILMNFELEASLINDFKSL 626
           V +VNSKV++FI+E+KG++WR +DWGLRRLAYKI+KAKNAHYILMNFELEA  INDFK++
Sbjct: 144 VENVNSKVQDFIREKKGKLWRLNDWGLRRLAYKIQKAKNAHYILMNFELEAQWINDFKTM 203

Query: 627 LDKDERVIRHLVIKRDNAITEACPPPLEFHTLRAG 731
           LD+DERVIRHLVIKRD AITE CPPP EFHTLRAG
Sbjct: 204 LDQDERVIRHLVIKRDEAITEDCPPPPEFHTLRAG 238


>ref|XP_003546305.1| PREDICTED: uncharacterized protein LOC100790128 [Glycine max]
          Length = 323

 Score =  283 bits (724), Expect = 5e-74
 Identities = 136/227 (59%), Positives = 180/227 (79%), Gaps = 2/227 (0%)
 Frame = +3

Query: 54  TSHCLRETRFFKTQISCLISPNGY--SSPRPFSSRKLEAKSRKSVIAESKRKKKVDSHSF 227
           T++C+R +  F     CL+  NGY  SS  P S +    KS   +++  K+ KK D+HS 
Sbjct: 28  TANCVRFS--FNYNNPCLLFANGYPSSSSLPLSLQNKPRKSASVIVSARKKDKKEDTHSS 85

Query: 228 VVKPDEATGPFPEAVLLKEKKVQEDGRVLPEFADDEEEKLFESLNLQLESDLNLQQMRHY 407
           V KPDE TG FPEAVLLK++ V+E+G++LPEF D EE +LFE+L L+L+SD++++ +RHY
Sbjct: 86  VPKPDEVTGFFPEAVLLKKRTVEEEGKLLPEFEDAEERQLFEALMLELDSDMDVEILRHY 145

Query: 408 EVVYLIHEDHKEEVGSVNSKVEEFIKERKGRIWRFSDWGLRRLAYKIKKAKNAHYILMNF 587
           EV+YLIHE H+EEV +VN K+++F++E+KG++WR +DWG+RRLAYKIKKA NAHY+L+NF
Sbjct: 146 EVMYLIHEKHEEEVAAVNEKIQDFLREKKGQVWRLNDWGMRRLAYKIKKANNAHYMLINF 205

Query: 588 ELEASLINDFKSLLDKDERVIRHLVIKRDNAITEACPPPLEFHTLRA 728
           EL+A  INDFK+LLD+DERVIRHLVIKRD AITE CPPP EFHTLRA
Sbjct: 206 ELDAKYINDFKTLLDQDERVIRHLVIKRDEAITEDCPPPPEFHTLRA 252


>ref|XP_002885189.1| hypothetical protein ARALYDRAFT_318480 [Arabidopsis lyrata subsp.
           lyrata] gi|297331029|gb|EFH61448.1| hypothetical protein
           ARALYDRAFT_318480 [Arabidopsis lyrata subsp. lyrata]
          Length = 313

 Score =  283 bits (724), Expect = 5e-74
 Identities = 129/182 (70%), Positives = 161/182 (88%)
 Frame = +3

Query: 186 AESKRKKKVDSHSFVVKPDEATGPFPEAVLLKEKKVQEDGRVLPEFADDEEEKLFESLNL 365
           A+ K+ KK D+HSF  +PDEATGPFPE++LLKEKK+ E+G +LPEFAD EE++L+E L+L
Sbjct: 50  AKKKKSKKDDNHSFSARPDEATGPFPESILLKEKKIDEEGDLLPEFADAEEKELYEFLDL 109

Query: 366 QLESDLNLQQMRHYEVVYLIHEDHKEEVGSVNSKVEEFIKERKGRIWRFSDWGLRRLAYK 545
           QL+SDLN ++MRHYEVVYLIHE H EEV S+N KV++F+KE+KG++WRFSDWG+RRLAYK
Sbjct: 110 QLQSDLNEERMRHYEVVYLIHEKHAEEVESINQKVQDFLKEKKGKVWRFSDWGMRRLAYK 169

Query: 546 IKKAKNAHYILMNFELEASLINDFKSLLDKDERVIRHLVIKRDNAITEACPPPLEFHTLR 725
           I+KA+NAHYILMNFE+EA  +N+FK LLD DERVIRHLV+KRD AITE CPPP EFH++R
Sbjct: 170 IQKAENAHYILMNFEIEAKYLNEFKGLLDSDERVIRHLVMKRDEAITEDCPPPPEFHSVR 229

Query: 726 AG 731
           AG
Sbjct: 230 AG 231


>ref|NP_566568.1| Translation elongation factor EF1B/ribosomal protein S6 family
           protein [Arabidopsis thaliana]
           gi|15620810|dbj|BAB67768.1| RPS6-like protein
           [Arabidopsis thaliana] gi|18377866|gb|AAL67119.1|
           AT3g17170/K14A17_29 [Arabidopsis thaliana]
           gi|20856347|gb|AAM26661.1| AT3g17170/K14A17_29
           [Arabidopsis thaliana] gi|332642393|gb|AEE75914.1|
           Translation elongation factor EF1B/ribosomal protein S6
           family protein [Arabidopsis thaliana]
          Length = 314

 Score =  280 bits (715), Expect = 6e-73
 Identities = 126/182 (69%), Positives = 161/182 (88%)
 Frame = +3

Query: 186 AESKRKKKVDSHSFVVKPDEATGPFPEAVLLKEKKVQEDGRVLPEFADDEEEKLFESLNL 365
           A+ K+ KK D+H+F  +PDEATGPFPE++LLKEKK+ E+G +LPEFAD EE++L++ L+L
Sbjct: 50  AKKKKSKKDDNHNFSARPDEATGPFPESILLKEKKIDEEGDLLPEFADAEEKELYQFLDL 109

Query: 366 QLESDLNLQQMRHYEVVYLIHEDHKEEVGSVNSKVEEFIKERKGRIWRFSDWGLRRLAYK 545
           QL+SDLN ++MRHYEVVYLIHE H EEV S+N KV++++KE+KG++WRFSDWG+RRLAYK
Sbjct: 110 QLQSDLNEERMRHYEVVYLIHEKHAEEVESINQKVQDYLKEKKGKVWRFSDWGMRRLAYK 169

Query: 546 IKKAKNAHYILMNFELEASLINDFKSLLDKDERVIRHLVIKRDNAITEACPPPLEFHTLR 725
           I+KA+NAHYILMNFE+EA  +N+FK LLD DERVIRHLV+KRD AITE CPPP EFH++R
Sbjct: 170 IQKAENAHYILMNFEIEAKYLNEFKGLLDSDERVIRHLVMKRDEAITEDCPPPPEFHSVR 229

Query: 726 AG 731
           AG
Sbjct: 230 AG 231


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