BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010666
         (2112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26110.3| unnamed protein product [Vitis vinifera]              431   e-118
ref|XP_002276654.1| PREDICTED: double-stranded RNA-binding prote...   431   e-118
ref|XP_002512276.1| hypothetical protein RCOM_1429110 [Ricinus c...   416   e-113
emb|CBI34243.3| unnamed protein product [Vitis vinifera]              408   e-111
ref|XP_002271134.2| PREDICTED: double-stranded RNA-binding prote...   405   e-110

>emb|CBI26110.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  431 bits (1107), Expect = e-118
 Identities = 272/556 (48%), Positives = 328/556 (58%), Gaps = 34/556 (6%)
 Frame = -3

Query: 1837 MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCTTLRQAEHSA 1658
            MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGE FESP FC TLRQAEH+A
Sbjct: 1    MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEVFESPTFCNTLRQAEHAA 60

Query: 1657 AEVALTQLSKRGPSRSLAARVLDETGVYKNLLQETAHRAGLQLPVYTTVRSGPGHVPVFH 1478
            AEVAL  LSK GPS++LAA+VLDETGVYKNLLQETAHRAGL+LPVYTTVRSGPGH+PVF 
Sbjct: 61   AEVALNVLSKNGPSKALAAKVLDETGVYKNLLQETAHRAGLKLPVYTTVRSGPGHIPVFF 120

Query: 1477 CTVELAGLSFTGEPXXXXXXXXXXXXXXAWSVLKQLPHMQGSSSSSAKLEGERKDEQEQI 1298
            CTV++A +SFTGEP              AWS LK+L     SS+SSA LE    DE EQ+
Sbjct: 121  CTVDIAKMSFTGEPAKTKKQAQKNAAMAAWSALKRL-SQASSSTSSAPLESGGNDELEQV 179

Query: 1297 VVARALAKLCPSDVKKSTVQTDRYHGRQRSFPVRQDMTPASSGMHLYPMQYPSWPYSHYS 1118
             VAR LA L P +  KS  Q D   G Q S P R+D+ P  + + LY M    W +S   
Sbjct: 180  TVARYLASLQPPEANKS-AQRDGLLG-QGSTPCRRDLMPNDNAISLYSMHCRDWSHSAPL 237

Query: 1117 TEMAMFRMWQPEQAFQQQN-CLVLPVAPSP-PGPQILPLVHSIFQPDHGQYILATDKEPL 944
             ++A  + W  E+A QQQN  L LP AP+  P PQ+ P++ SIFQPDHG   L  ++EP 
Sbjct: 238  IQLA-HQSWPKERASQQQNHLLALPSAPTTLPRPQMSPIIRSIFQPDHGPCFLPREQEPA 296

Query: 943  SMLPGVSMSGSGPSHVFPNRAMPIRVRSRSQVTXXXXXXXXXXXXXSWLAGDTNSDGHKV 764
             + PG+     GP   F N +MP+ V + SQVT              WL  D NS   K+
Sbjct: 297  PLSPGI-----GPFLYFSNGSMPVPVSNLSQVT-IQEIEEKPKVEQEWLNVDANSGCWKI 350

Query: 763  KILSNSPGFPLAEVQ----NPLLQDKPHEDQKHGMPESDT-GHSVQLERNQSERFKW--- 608
               SN  G  L E+     +P    +P ++   G  E ++ G+S QL  NQ +R  W   
Sbjct: 351  NFPSNLSGLSLVEIPKCPISPNSHSEPIQEALQGKEEENSAGNSAQLGTNQIQRLAWTSP 410

Query: 607  ------SSQGPMETANRAAQATSPLK------PAENHPAIPSSGGVPKFCAQTLNAAPVR 464
                  SS G  + AN   Q    L        ++N P     G    +     +AAPV 
Sbjct: 411  RFADTRSSAGASDEANLWLQNQQFLDYLQSNIRSQNAPMATYPGSSRVYTRP--SAAPVT 468

Query: 463  IRSVGPVN---PRPESFKAWVPA------SAPTYSARPRF---MHTGGMPSNNFMAPAVH 320
            IRS    +   PRP S   +V A      +APT+S RP      +TG  P + FMAPAV+
Sbjct: 469  IRSSDASSIRKPRPMSSSLFVSAPPPTRYAAPTWSTRPTLEGAKYTGVRPCSRFMAPAVN 528

Query: 319  IRSVIPVCSAPPVKVR 272
            IRSV+PVCSAPP K R
Sbjct: 529  IRSVVPVCSAPPAKDR 544


>ref|XP_002276654.1| PREDICTED: double-stranded RNA-binding protein 2-like [Vitis
            vinifera]
          Length = 563

 Score =  431 bits (1107), Expect = e-118
 Identities = 272/556 (48%), Positives = 328/556 (58%), Gaps = 34/556 (6%)
 Frame = -3

Query: 1837 MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCTTLRQAEHSA 1658
            MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGE FESP FC TLRQAEH+A
Sbjct: 1    MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEVFESPTFCNTLRQAEHAA 60

Query: 1657 AEVALTQLSKRGPSRSLAARVLDETGVYKNLLQETAHRAGLQLPVYTTVRSGPGHVPVFH 1478
            AEVAL  LSK GPS++LAA+VLDETGVYKNLLQETAHRAGL+LPVYTTVRSGPGH+PVF 
Sbjct: 61   AEVALNVLSKNGPSKALAAKVLDETGVYKNLLQETAHRAGLKLPVYTTVRSGPGHIPVFF 120

Query: 1477 CTVELAGLSFTGEPXXXXXXXXXXXXXXAWSVLKQLPHMQGSSSSSAKLEGERKDEQEQI 1298
            CTV++A +SFTGEP              AWS LK+L     SS+SSA LE    DE EQ+
Sbjct: 121  CTVDIAKMSFTGEPAKTKKQAQKNAAMAAWSALKRL-SQASSSTSSAPLESGGNDELEQV 179

Query: 1297 VVARALAKLCPSDVKKSTVQTDRYHGRQRSFPVRQDMTPASSGMHLYPMQYPSWPYSHYS 1118
             VAR LA L P +  KS  Q D   G Q S P R+D+ P  + + LY M    W +S   
Sbjct: 180  TVARYLASLQPPEANKS-AQRDGLLG-QGSTPCRRDLMPNDNAISLYSMHCRDWSHSAPL 237

Query: 1117 TEMAMFRMWQPEQAFQQQN-CLVLPVAPSP-PGPQILPLVHSIFQPDHGQYILATDKEPL 944
             ++A  + W  E+A QQQN  L LP AP+  P PQ+ P++ SIFQPDHG   L  ++EP 
Sbjct: 238  IQLA-HQSWPKERASQQQNHLLALPSAPTTLPRPQMSPIIRSIFQPDHGPCFLPREQEPA 296

Query: 943  SMLPGVSMSGSGPSHVFPNRAMPIRVRSRSQVTXXXXXXXXXXXXXSWLAGDTNSDGHKV 764
             + PG+     GP   F N +MP+ V + SQVT              WL  D NS   K+
Sbjct: 297  PLSPGI-----GPFLYFSNGSMPVPVSNLSQVT-IQEIEEKPKVEQEWLNVDANSGCWKI 350

Query: 763  KILSNSPGFPLAEVQ----NPLLQDKPHEDQKHGMPESDT-GHSVQLERNQSERFKW--- 608
               SN  G  L E+     +P    +P ++   G  E ++ G+S QL  NQ +R  W   
Sbjct: 351  NFPSNLSGLSLVEIPKCPISPNSHSEPIQEALQGKEEENSAGNSAQLGTNQIQRLAWTSP 410

Query: 607  ------SSQGPMETANRAAQATSPLK------PAENHPAIPSSGGVPKFCAQTLNAAPVR 464
                  SS G  + AN   Q    L        ++N P     G    +     +AAPV 
Sbjct: 411  RFADTRSSAGASDEANLWLQNQQFLDYLQSNIRSQNAPMATYPGSSRVYTRP--SAAPVT 468

Query: 463  IRSVGPVN---PRPESFKAWVPA------SAPTYSARPRF---MHTGGMPSNNFMAPAVH 320
            IRS    +   PRP S   +V A      +APT+S RP      +TG  P + FMAPAV+
Sbjct: 469  IRSSDASSIRKPRPMSSSLFVSAPPPTRYAAPTWSTRPTLEGAKYTGVRPCSRFMAPAVN 528

Query: 319  IRSVIPVCSAPPVKVR 272
            IRSV+PVCSAPP K R
Sbjct: 529  IRSVVPVCSAPPAKDR 544


>ref|XP_002512276.1| hypothetical protein RCOM_1429110 [Ricinus communis]
            gi|223548237|gb|EEF49728.1| hypothetical protein
            RCOM_1429110 [Ricinus communis]
          Length = 568

 Score =  416 bits (1068), Expect = e-113
 Identities = 270/590 (45%), Positives = 344/590 (58%), Gaps = 35/590 (5%)
 Frame = -3

Query: 1837 MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCTTLRQAEHSA 1658
            MYKNQLQELAQRSCFNLPSY+CIREGPDHAPRFKATVNFNGETFESPAFC+TLRQAEH+A
Sbjct: 1    MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGETFESPAFCSTLRQAEHAA 60

Query: 1657 AEVALTQLSKRGPSRSLAARVLDETGVYKNLLQETAHRAGLQLPVYTTVRSGPGHVPVFH 1478
            AEVAL  L+ RGPSR+LAARVLDETGVYKNLLQETAHRAGL+LPVYTTVRSGPGHVPVF 
Sbjct: 61   AEVALNTLASRGPSRALAARVLDETGVYKNLLQETAHRAGLKLPVYTTVRSGPGHVPVFS 120

Query: 1477 CTVELAGLSFTGEPXXXXXXXXXXXXXXAWSVLKQLPHMQGSSSS--SAKLEGERK--DE 1310
            CTVELAG+SFTGEP              AWS LK+L     SSSS  S+ L   RK  +E
Sbjct: 121  CTVELAGMSFTGEPARTKKQAQKNAAMAAWSALKRLVQHGSSSSSSLSSSLVENRKGSEE 180

Query: 1309 QEQIVVARALAKLCPSDVKKSTVQTDRYHGRQRSFPVRQDMTPASSGMHLYPMQYPSWPY 1130
            QEQ+V+AR LA + PS++K +  Q D   G +R  PV +D+TP +    LYPMQ  +W Y
Sbjct: 181  QEQVVIARFLASVQPSELKINK-QNDCQTGHERFIPVCKDLTPPTPS--LYPMQSQNWAY 237

Query: 1129 SHYSTEMAMFRMWQPEQAFQQQNCLV---LPVAPSPPGPQILPLVHSIFQPDHGQYILAT 959
              +S E+A+++MWQ EQ  Q  N L+   +P AP PP P +LP + S+  P+   +    
Sbjct: 238  PSFSPEIAIYQMWQQEQLLQLHNRLLTLQVPPAP-PPAPPMLPYMQSVLPPNSHLFFPLR 296

Query: 958  DKEPLSMLPGVSMSGSGPSHVFPNRAMPIRVRSRSQVTXXXXXXXXXXXXXSWLAGDTNS 779
             +E + + P ++++ SGP     +      VR +S VT                    + 
Sbjct: 297  KQETVPVGPRITIASSGPLLCLSDNVDSDSVRGKSAVTIQEINEEK----------PEDL 346

Query: 778  DGHKVKILSNSPGFPLAEVQNPLLQDKPHEDQKHGMPESDTGHSVQLERNQSER------ 617
                  I+S+ P   L  +       + H+D K+   ES    +V+L  N S +      
Sbjct: 347  SDCSPSIISDPP--VLGNLSAEARFKESHDDDKNNAVESKV-ENVRLAENPSGQSSHRNT 403

Query: 616  --------FKWSSQGPMETANRAAQATSPLKPAENHPAIPSSGGVPKFCAQTLNAA-PVR 464
                    F+  S G   + + ++Q +         P  P +  +     + L AA PVR
Sbjct: 404  DSGYSQVDFRVQSPGVFVSCHASSQFSPRQSSTSCRP--PPTVMIRNVGPRPLPAAPPVR 461

Query: 463  IRSVGPVN--PRPESFKAWVP------ASAPTYSARP---RFMHTGGMPSNNFMAPAVHI 317
            IR++GPV+  PRP    A +P        AP+YSARP   R    G  P   FMAPAV I
Sbjct: 462  IRTMGPVSSVPRPHDLAAQIPGPPRMRTGAPSYSARPQPQRMDFVGVHP--RFMAPAVRI 519

Query: 316  RSVIPVCSAPPV--KVRESSQGGGPHSSSERTKEPEDVAAANAEMSKLRI 173
            RSV+PVCSAPP   K+  + Q G   +  +    PED+ +  +E SKLRI
Sbjct: 520  RSVVPVCSAPPPARKMPTAGQEGALLNKQKNGSVPEDI-STTSEFSKLRI 568


>emb|CBI34243.3| unnamed protein product [Vitis vinifera]
          Length = 551

 Score =  408 bits (1048), Expect = e-111
 Identities = 260/545 (47%), Positives = 319/545 (58%), Gaps = 25/545 (4%)
 Frame = -3

Query: 1837 MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCTTLRQAEHSA 1658
            MYKNQLQELAQRSCFNLPSY+CIREGPDHAPRFKATVNFNGETFESP+FC+TLRQAEH+A
Sbjct: 1    MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGETFESPSFCSTLRQAEHAA 60

Query: 1657 AEVALTQLSKRGPSRSLAARVLDETGVYKNLLQETAHRAGLQLPVYTTVRSGPGHVPVFH 1478
            AEVAL  L+ RGPS++LAARVLDETGVYKNLLQETAHRAGL LPVYTT+RSGPGHVPVF 
Sbjct: 61   AEVALNTLANRGPSKALAARVLDETGVYKNLLQETAHRAGLNLPVYTTIRSGPGHVPVFS 120

Query: 1477 CTVELAGLSFTGEPXXXXXXXXXXXXXXAWSVLKQLPHMQGSSSSSAKLEGERKDEQEQI 1298
            CTVE+AG+SFTGE               AWS L++L   Q  S SS  +E E  +EQEQ+
Sbjct: 121  CTVEIAGMSFTGEAAKTKKQAQKNAAMTAWSALRKLS--QRGSPSSPSVESECNEEQEQV 178

Query: 1297 VVARALAKLCPSDVKKSTVQTDRYHGRQRSFPVRQDMTPASSGMHLYPMQYPSWPYSHYS 1118
            ++AR LA L PS  K +  Q DR HG+QRS  + +D TP +       MQY S     + 
Sbjct: 179  IIARVLASLRPS--KSNNKQNDRQHGQQRSGSICRDSTPQTPIS--CSMQYQSTVDPSFF 234

Query: 1117 TEMAMFRMWQPEQAFQQQN-CLVLPVAPSP-PGPQILPLVHSIFQPDHGQYILATDKEPL 944
             EMAM++MWQ EQ  Q QN  L LPV  +P P P   P + S+F+PDH  Y     ++P+
Sbjct: 235  PEMAMYQMWQQEQLAQLQNRLLALPVPLAPQPSPHFFPFMQSMFRPDHCLYFPTEVQQPI 294

Query: 943  SMLPGVSMSGSGPSHVFPNRAMPIRVRSRSQVTXXXXXXXXXXXXXSWLAGDTNSDGHKV 764
            +M P  S++ SG S    N  +P  +R RS VT                  +  S+    
Sbjct: 295  TMGPRFSIAASGSSFYLSNHLVPEPMRGRSMVTIQEIEEKT----------EERSEFSPS 344

Query: 763  KILSNSPGFPLAEVQNPLLQDKP-HEDQKHGMPE--SDTGHSVQLERNQSERFKWSSQ-- 599
            ++ S SP   L +     +  +P  ED K    E       SVQLERNQ  +F W+S+  
Sbjct: 345  EV-SVSPA--LGDNNTEAINQEPIQEDNKQNTEELGGKIATSVQLERNQPGQFGWTSRRS 401

Query: 598  -----GPMETANRAAQA--TSPLKPAENHPAIPSSGGVPKFCAQTLNAAPVRIRSVGPVN 440
                 GP+E   +      +S   P   HP  P           +  AAPV  R+  PV+
Sbjct: 402  VDSRLGPIEFQLQRPHGFDSSQSNPRPYHP--PGLSSYRSSRPPSTVAAPVMTRTGDPVS 459

Query: 439  P---RPESFKAWVPA------SAPTYSARPR--FMHTGGMPSNNFMAPAVHIRSVIPVCS 293
                RP++    +PA        P YS RPR   M  G  P    MAPAV IR+V+PVCS
Sbjct: 460  SVGLRPQNLANQMPAPPRMRTGIPPYSFRPRPERMDFGRGPPRA-MAPAVQIRTVVPVCS 518

Query: 292  APPVK 278
            APP +
Sbjct: 519  APPAR 523



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 39/100 (39%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
 Frame = -3

Query: 1900 NNLRKGSKQEISLSCLVSHPGMYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNF 1721
            N L      +   + ++   G+YKN LQE A R+  NLP Y  IR GP H P F  TV  
Sbjct: 66   NTLANRGPSKALAARVLDETGVYKNLLQETAHRAGLNLPVYTTIRSGPGHVPVFSCTVEI 125

Query: 1720 NGETFESPAFCTTLRQAEHSAAEV---ALTQLSKRGPSRS 1610
             G +F   A   T +QA+ +AA     AL +LS+RG   S
Sbjct: 126  AGMSFTGEA-AKTKKQAQKNAAMTAWSALRKLSQRGSPSS 164


>ref|XP_002271134.2| PREDICTED: double-stranded RNA-binding protein 2 [Vitis vinifera]
          Length = 532

 Score =  405 bits (1041), Expect = e-110
 Identities = 264/565 (46%), Positives = 322/565 (56%), Gaps = 26/565 (4%)
 Frame = -3

Query: 1837 MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCTTLRQAEHSA 1658
            MYKNQLQELAQRSCFNLPSY+CIREGPDHAPRFKATVNFNGETFESP+FC+TLRQAEH+A
Sbjct: 1    MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGETFESPSFCSTLRQAEHAA 60

Query: 1657 AEVALTQLSKRGPSRSLAARVLDETGVYKNLLQETAHRAGLQLPVYTTVRSGPGHVPVFH 1478
            AEVAL  L+ RGPS++LAARVLDETGVYKNLLQETAHRAGL LPVYTT+RSGPGHVPVF 
Sbjct: 61   AEVALNTLANRGPSKALAARVLDETGVYKNLLQETAHRAGLNLPVYTTIRSGPGHVPVFS 120

Query: 1477 CTVELAGLSFTGEPXXXXXXXXXXXXXXAWSVLKQLPHMQGSSSSSAKLEGERKDEQEQI 1298
            CTVE+AG+SFTGE               AWS L+             KLE E  +EQEQ+
Sbjct: 121  CTVEIAGMSFTGEAAKTKKQAQKNAAMTAWSALR-------------KLESECNEEQEQV 167

Query: 1297 VVARALAKLCPSDVKKSTVQTDRYHGRQRSFPVRQDMTPASSGMHLYPMQYPSWPYSHYS 1118
            ++AR LA L PS  K +  Q DR HG+QRS  + +D TP +       MQY S     + 
Sbjct: 168  IIARVLASLRPS--KSNNKQNDRQHGQQRSGSICRDSTPQTPIS--CSMQYQSTVDPSFF 223

Query: 1117 TEMAMFRMWQPEQAFQQQN-CLVLPVAPSP-PGPQILPLVHSIFQPDHGQYILATDKEPL 944
             EMAM++MWQ EQ  Q QN  L LPV  +P P P   P + S+F+PDH  Y     ++P+
Sbjct: 224  PEMAMYQMWQQEQLAQLQNRLLALPVPLAPQPSPHFFPFMQSMFRPDHCLYFPTEVQQPI 283

Query: 943  SMLPGVSMSGSGPSHVFPNRAMPIRVRSRSQVTXXXXXXXXXXXXXSWLAGDTNSDGHKV 764
            +M P  S++ SG S    N  +P  +R RS VT                  +  S+    
Sbjct: 284  TMGPRFSIAASGSSFYLSNHLVPEPMRGRSMVTIQEIEEKT----------EERSEFSPS 333

Query: 763  KILSNSPGFPLAEVQNPLLQDKP-HEDQKHGMPE--SDTGHSVQLERNQSERFKWSSQ-- 599
            ++ S SP   L +     +  +P  ED K    E       SVQLERNQ  +F W+S+  
Sbjct: 334  EV-SVSPA--LGDNNTEAINQEPIQEDNKQNTEELGGKIATSVQLERNQPGQFGWTSRRS 390

Query: 598  -----GPMETANRAAQA--TSPLKPAENHPAIPSSGGVPKFCAQTLNAAPVRIRSVGPVN 440
                 GP+E   +      +S   P   HP  P           +  AAPV  R+  PV+
Sbjct: 391  VDSRLGPIEFQLQRPHGFDSSQSNPRPYHP--PGLSSYRSSRPPSTVAAPVMTRTGDPVS 448

Query: 439  P---RPESFKAWVPA------SAPTYSARPR--FMHTGGMPSNNFMAPAVHIRSVIPVCS 293
                RP++    +PA        P YS RPR   M  G  P    MAPAV IR+V+PVCS
Sbjct: 449  SVGLRPQNLANQMPAPPRMRTGIPPYSFRPRPERMDFGRGPPRA-MAPAVQIRTVVPVCS 507

Query: 292  APPV-KVRESSQGGGPHSSSERTKE 221
            APP  K+  SSQ G P     +  E
Sbjct: 508  APPARKIPSSSQEGLPPYRENKNAE 532



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 35/91 (38%), Positives = 46/91 (50%)
 Frame = -3

Query: 1900 NNLRKGSKQEISLSCLVSHPGMYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNF 1721
            N L      +   + ++   G+YKN LQE A R+  NLP Y  IR GP H P F  TV  
Sbjct: 66   NTLANRGPSKALAARVLDETGVYKNLLQETAHRAGLNLPVYTTIRSGPGHVPVFSCTVEI 125

Query: 1720 NGETFESPAFCTTLRQAEHSAAEVALTQLSK 1628
             G +F   A   T +QA+ +AA  A + L K
Sbjct: 126  AGMSFTGEA-AKTKKQAQKNAAMTAWSALRK 155