BLASTX nr result

ID: Cimicifuga21_contig00010665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010665
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630693.1| Derlin-1 [Medicago truncatula] gi|355524715|...   390   e-106
ref|XP_004135679.1| PREDICTED: derlin-1-like [Cucumis sativus] g...   388   e-105
ref|XP_003530537.1| PREDICTED: derlin-1-like [Glycine max]            379   e-103
ref|XP_002275238.1| PREDICTED: derlin-1 [Vitis vinifera] gi|2960...   377   e-102
ref|XP_003525291.1| PREDICTED: derlin-1-like [Glycine max]            376   e-102

>ref|XP_003630693.1| Derlin-1 [Medicago truncatula] gi|355524715|gb|AET05169.1| Derlin-1
            [Medicago truncatula] gi|388496922|gb|AFK36527.1| unknown
            [Medicago truncatula]
          Length = 245

 Score =  390 bits (1002), Expect = e-106
 Identities = 194/245 (79%), Positives = 209/245 (85%), Gaps = 4/245 (1%)
 Frame = -2

Query: 1060 MSSPGEFYKSLPPVSKAYGTACFLATAAFQLGLYNPKYLALDYEMVFSRFQVWRLITNFF 881
            MSSPGEFYKSLPP+SKAYGTAC +ATA +QLGLYNP ++AL YE VF RFQVWRL TNFF
Sbjct: 1    MSSPGEFYKSLPPISKAYGTACLVATAVYQLGLYNPVHIALLYERVFFRFQVWRLFTNFF 60

Query: 880  FLGGFSINFGIRLLMIARYGVQLEKGPFDRRPADFLWMMIFGAFSLLAVTAIPLFRSYFL 701
            FLG FSINFGIRLLMI RYGVQLEKGPFDRR ADFLWMMIFGAF+LL ++AIP F + FL
Sbjct: 61   FLGPFSINFGIRLLMIVRYGVQLEKGPFDRRTADFLWMMIFGAFALLVLSAIPFFWTPFL 120

Query: 700  GISLVFMLLYVWSREFPNAQINIYGLVQLKAFYLPWAMLALDVIFGSPLMPNLMGILAGH 521
             ISLVFMLLYVWSREFPNAQIN+YGLV LKAFYLPWAMLALDVIFGS LMP+L+GI+AGH
Sbjct: 121  AISLVFMLLYVWSREFPNAQINLYGLVALKAFYLPWAMLALDVIFGSALMPDLLGIIAGH 180

Query: 520  LYYFLTVLHPLAGGKNILKTPNWVHKLVTRWGIAYRP--TGQAVQ--PDRSTGGAFSGRS 353
            LYYFLTVLHPLAGGKNILKTP WVHKLV RW I   P   GQ V      S+ G F GRS
Sbjct: 181  LYYFLTVLHPLAGGKNILKTPMWVHKLVARWRIGAPPITRGQPVNNVQQESSSGVFRGRS 240

Query: 352  YRLSG 338
            YRL+G
Sbjct: 241  YRLNG 245


>ref|XP_004135679.1| PREDICTED: derlin-1-like [Cucumis sativus]
            gi|449489818|ref|XP_004158425.1| PREDICTED: derlin-1-like
            [Cucumis sativus]
          Length = 242

 Score =  388 bits (996), Expect = e-105
 Identities = 189/242 (78%), Positives = 207/242 (85%), Gaps = 1/242 (0%)
 Frame = -2

Query: 1060 MSSPGEFYKSLPPVSKAYGTACFLATAAFQLGLYNPKYLALDYEMVFSRFQVWRLITNFF 881
            MSSP EFY SLPP+SKAYGT CFLAT AFQLGLY+P  +ALDY +VF  FQVWRL TNFF
Sbjct: 1    MSSPAEFYNSLPPISKAYGTLCFLATTAFQLGLYDPMLIALDYGLVFKHFQVWRLFTNFF 60

Query: 880  FLGGFSINFGIRLLMIARYGVQLEKGPFDRRPADFLWMMIFGAFSLLAVTAIPLFRSYFL 701
            FLG FSINFGIRLLMIARYGVQLE GPF RR ADFLWMMIFG+ +LL + AIP+F+   L
Sbjct: 61   FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGSLTLLVLAAIPIFQFPVL 120

Query: 700  GISLVFMLLYVWSREFPNAQINIYGLVQLKAFYLPWAMLALDVIFGSPLMPNLMGILAGH 521
            GISLVFMLLYVWSREFPNAQINIYGLV LKAFYLPWAMLALDVIFGSPL+P+L+GILAGH
Sbjct: 121  GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180

Query: 520  LYYFLTVLHPLAGGKNILKTPNWVHKLVTRWGIAYRPTGQAVQP-DRSTGGAFSGRSYRL 344
            LYYFLTVLHPLAGGKNIL+TP W+ +LV+RW I   P  +A  P DR T GAF GRSYRL
Sbjct: 181  LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPMQRAAVPDDRGTSGAFRGRSYRL 240

Query: 343  SG 338
            +G
Sbjct: 241  NG 242


>ref|XP_003530537.1| PREDICTED: derlin-1-like [Glycine max]
          Length = 246

 Score =  379 bits (974), Expect = e-103
 Identities = 184/246 (74%), Positives = 204/246 (82%), Gaps = 5/246 (2%)
 Frame = -2

Query: 1060 MSSPGEFYKSLPPVSKAYGTACFLATAAFQLGLYNPKYLALDYEMVFSRFQVWRLITNFF 881
            MSSP EFY SLPP++KAYGT C LATA + LGLY+P Y+AL Y+ VF  FQVWRL TN F
Sbjct: 1    MSSPAEFYHSLPPITKAYGTVCLLATATYHLGLYHPAYIALFYDKVFYGFQVWRLFTNLF 60

Query: 880  FLGGFSINFGIRLLMIARYGVQLEKGPFDRRPADFLWMMIFGAFSLLAVTAIPLFRSYFL 701
            FLG FSINFGIRLLMI RYGVQLEKGPFDRR ADFLWMMIFGAF+LL ++AIP+F S FL
Sbjct: 61   FLGPFSINFGIRLLMIVRYGVQLEKGPFDRRTADFLWMMIFGAFALLVLSAIPIFWSPFL 120

Query: 700  GISLVFMLLYVWSREFPNAQINIYGLVQLKAFYLPWAMLALDVIFGSPLMPNLMGILAGH 521
             + LVFMLLYVWSREFPNAQINIYGLV LKAFYLPWAMLALDVIFGSPL+P+L+GI+AGH
Sbjct: 121  AVPLVFMLLYVWSREFPNAQINIYGLVALKAFYLPWAMLALDVIFGSPLIPDLLGIIAGH 180

Query: 520  LYYFLTVLHPLAGGKNILKTPNWVHKLVTRWGIAYRPTGQA-----VQPDRSTGGAFSGR 356
            LYYF TVLHPLAGGKNILKTP WVHKL+ RW I  +P  +       Q +R +G AF GR
Sbjct: 181  LYYFFTVLHPLAGGKNILKTPMWVHKLIARWRIGVQPISRGPAANNPQQERGSGVAFRGR 240

Query: 355  SYRLSG 338
            SYRL G
Sbjct: 241  SYRLGG 246


>ref|XP_002275238.1| PREDICTED: derlin-1 [Vitis vinifera] gi|296081591|emb|CBI20596.3|
            unnamed protein product [Vitis vinifera]
          Length = 240

 Score =  377 bits (967), Expect = e-102
 Identities = 182/241 (75%), Positives = 205/241 (85%)
 Frame = -2

Query: 1060 MSSPGEFYKSLPPVSKAYGTACFLATAAFQLGLYNPKYLALDYEMVFSRFQVWRLITNFF 881
            MS+P EFY SLPP+SKAYGT C +AT AF LGL+ P Y AL YE+VF  FQVWRL+TNFF
Sbjct: 1    MSTPAEFYNSLPPISKAYGTMCLVATTAFHLGLFPPMYTALIYELVFKHFQVWRLVTNFF 60

Query: 880  FLGGFSINFGIRLLMIARYGVQLEKGPFDRRPADFLWMMIFGAFSLLAVTAIPLFRSYFL 701
            FLG FSINFGIRLLMIARYGVQLEKG F+RR ADFLWMMIFGA +LL ++AIPL  + FL
Sbjct: 61   FLGKFSINFGIRLLMIARYGVQLEKGVFERRTADFLWMMIFGALTLLVLSAIPLLWTPFL 120

Query: 700  GISLVFMLLYVWSREFPNAQINIYGLVQLKAFYLPWAMLALDVIFGSPLMPNLMGILAGH 521
            G+SLVFMLLYVWSREFPNAQIN+YGLVQLKAFY PWAMLALDVIFGS ++P+L+GI+AGH
Sbjct: 121  GVSLVFMLLYVWSREFPNAQINLYGLVQLKAFYFPWAMLALDVIFGSQILPDLLGIVAGH 180

Query: 520  LYYFLTVLHPLAGGKNILKTPNWVHKLVTRWGIAYRPTGQAVQPDRSTGGAFSGRSYRLS 341
            LYYFLTVLHPL+ GKNILKTP WVHKLV R+ I Y PT    QP+R+ G AF GR YRL+
Sbjct: 181  LYYFLTVLHPLSTGKNILKTPRWVHKLVARFRIGY-PTTAPAQPERAAGVAFRGRGYRLN 239

Query: 340  G 338
            G
Sbjct: 240  G 240


>ref|XP_003525291.1| PREDICTED: derlin-1-like [Glycine max]
          Length = 246

 Score =  376 bits (966), Expect = e-102
 Identities = 186/246 (75%), Positives = 205/246 (83%), Gaps = 5/246 (2%)
 Frame = -2

Query: 1060 MSSPGEFYKSLPPVSKAYGTACFLATAAFQLGLYNPKYLALDYEMVFSRFQVWRLITNFF 881
            MSSP EFY SLPP++KAYGT C LATA + LGL +P Y+AL Y+ VF  FQ WRL TN F
Sbjct: 1    MSSPAEFYHSLPPITKAYGTVCLLATATYHLGLDHPAYIALLYDKVFYGFQAWRLFTNLF 60

Query: 880  FLGGFSINFGIRLLMIARYGVQLEKGPFDRRPADFLWMMIFGAFSLLAVTAIPLFRSYFL 701
            FLG FSINFGIRLLMI RYGVQLEKGPFDRR ADFLWMMIFGAF+LL ++AIP+F S FL
Sbjct: 61   FLGPFSINFGIRLLMIVRYGVQLEKGPFDRRTADFLWMMIFGAFALLVLSAIPIFWSPFL 120

Query: 700  GISLVFMLLYVWSREFPNAQINIYGLVQLKAFYLPWAMLALDVIFGSPLMPNLMGILAGH 521
             + LVFMLLYVWSREFPNAQINIYGLV LKAFYLPWAMLALD+IFGSPL+P+L+GI+AGH
Sbjct: 121  AVPLVFMLLYVWSREFPNAQINIYGLVALKAFYLPWAMLALDIIFGSPLIPDLLGIIAGH 180

Query: 520  LYYFLTVLHPLAGGKNILKTPNWVHKLVTRWGIAYRP--TGQAV---QPDRSTGGAFSGR 356
            LYYFLTVLHPLAGGKNILKTP WVHKLV RW I  +P   GQA    Q +R +G AF GR
Sbjct: 181  LYYFLTVLHPLAGGKNILKTPMWVHKLVARWIIGVQPISRGQAANDPQQERGSGVAFRGR 240

Query: 355  SYRLSG 338
            SYRL G
Sbjct: 241  SYRLGG 246


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