BLASTX nr result
ID: Cimicifuga21_contig00010627
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00010627 (1879 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi... 432 0.0 ref|XP_002300741.1| predicted protein [Populus trichocarpa] gi|2... 397 e-157 emb|CBI19765.3| unnamed protein product [Vitis vinifera] 432 e-118 ref|XP_002510452.1| pentatricopeptide repeat-containing protein,... 418 e-114 ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arab... 402 e-109 >ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like [Vitis vinifera] Length = 1545 Score = 432 bits (1110), Expect(2) = 0.0 Identities = 213/385 (55%), Positives = 267/385 (69%), Gaps = 7/385 (1%) Frame = -1 Query: 1273 TSSQGNRLLRAIVKKNQMIRCFFLLALRMDSGGSIFDDGVYTGVRQVNLTRGAGIVSFKV 1094 + S+ +++ A+ + +R GG +FDDGV TGVRQ+NL+R GIVS KV Sbjct: 1160 SDSEKGKIIGAVERVPSKVRGAVTYGPWGGKGGFVFDDGVSTGVRQINLSRNIGIVSIKV 1219 Query: 1093 LYDRNGKAIWGNKYGGSGGMKTDKIMFDFPFEALTHITGYYGPLMYMGPSVIKSLSFHTN 914 LYD+NG+A+WG+K GG+GG + DKI+ D+P+E LTHITGYY P M MGP++IKSL+FHT Sbjct: 1220 LYDQNGQAVWGSKNGGTGGFRNDKIVIDYPYEVLTHITGYYAPTMVMGPNIIKSLTFHTT 1279 Query: 913 KKIYGPYGDEQGTPFSSNLKEGKIVGFFGKRGWYIDSIGVHVIEGKVSTP-QPSRNASLN 737 K YGP+G+EQGTPFSSN+KEG IVGF G+ G +ID+IGVH+IEGK P +P N LN Sbjct: 1280 KTKYGPFGEEQGTPFSSNIKEGVIVGFHGRTGLFIDAIGVHMIEGKARPPTRPPSNKQLN 1339 Query: 736 YMNDM-----PVAEMDNPQWSNKLVLAKRGGPNEEVTFGVVKEPAPCXXXXXXXXXXXXX 572 AE+D P W + + +GGP EEV GVVKEPAPC Sbjct: 1340 QNQSQIQVLDNAAEVDRPLWYSNKSVPTKGGPFEEVGSGVVKEPAPCGPGPWGGDGGRPW 1399 Query: 571 XXGVFTGVKQIFLTRAEAICSIQIEYDRNGQSVWSARHGGS-GEATNKIKFEYPHEVVTC 395 GVF+G+KQI+LTRAEAICSIQIEY RNGQS+WS +HGG G T+++K EYPHEVV+C Sbjct: 1400 DDGVFSGIKQIYLTRAEAICSIQIEYARNGQSIWSTKHGGDYGTTTHRVKLEYPHEVVSC 1459 Query: 394 VCGYYSPINRDDRMKVIKSLTFYTSRGKYGPYXXXXXXXXXXXXXXGKVVGFHGRSSLYL 215 +CGYY PI+ ++ IKSLTFYTSRGKYGP+ GKVVGFHGRSSLYL Sbjct: 1460 ICGYYGPISINEPWNAIKSLTFYTSRGKYGPFGEEIGTYFTSTRTEGKVVGFHGRSSLYL 1519 Query: 214 DAIGVHMQHWLGERRPGKSKFYKLW 140 DAIGVHMQHWLG++R K +K++ Sbjct: 1520 DAIGVHMQHWLGDQRTLKPNLFKIF 1544 Score = 244 bits (623), Expect(2) = 0.0 Identities = 117/193 (60%), Positives = 149/193 (77%) Frame = -3 Query: 1868 PISVGPXXXXXXXXXXXGFYTTVRQLVIAHGAGIDSIQIEYDKKGSAAWSMKHGGSGGIK 1689 PISVGP G Y+TVRQLVIAHG GIDSI IEYDK GS+ WS KHGGSGG + Sbjct: 950 PISVGPWGGQDGLRWDDGVYSTVRQLVIAHGVGIDSILIEYDKNGSSVWSEKHGGSGGTR 1009 Query: 1688 VDRIKLDSPEEFLTSISGHYGSIHDWGPIVFVRSLTFQSNRKTYGPYGTQQGNQFSFAMN 1509 +R+KLDSP+EFLTSI GHYGS+ + GP VFVRSLT +SN++TYGP+G +QG FS Sbjct: 1010 TNRVKLDSPDEFLTSIHGHYGSLLERGP-VFVRSLTLESNKRTYGPFGIEQGIYFSLPTT 1068 Query: 1508 GGKIVGFHGRSGWYLDSIGVYLKALPKPNPSKALVSSQSFVANGTDKIGYNVVQGSLGKG 1329 GGKI+GFHG+SGWYLD+IGV+LK KP+P K+ V +Q++ + GTD++ Y+VVQG + +G Sbjct: 1069 GGKIIGFHGKSGWYLDAIGVHLKP-HKPSPFKSSVQTQNYFSTGTDRVAYSVVQGGVSRG 1127 Query: 1328 FDVVLAVRQNDDF 1290 +DV++A RQ DD+ Sbjct: 1128 YDVIVAFRQKDDY 1140 Score = 229 bits (583), Expect = 2e-57 Identities = 141/372 (37%), Positives = 201/372 (54%), Gaps = 35/372 (9%) Frame = -1 Query: 1177 GSIFDDGVYTGVRQVNLTRGAGIVSFKVLYDRNGKAIWGNKYGGSGGMKTDKIMFDFPFE 998 G +DDGVY+ VRQ+ + G GI S + YD+NG ++W K+GGSGG +T+++ D P E Sbjct: 961 GLRWDDGVYSTVRQLVIAHGVGIDSILIEYDKNGSSVWSEKHGGSGGTRTNRVKLDSPDE 1020 Query: 997 ALTHITGYYGPLMYMGPSVIKSLSFHTNKKIYGPYGDEQGTPFSSNLKEGKIVGFFGKRG 818 LT I G+YG L+ GP ++SL+ +NK+ YGP+G EQG FS GKI+GF GK G Sbjct: 1021 FLTSIHGHYGSLLERGPVFVRSLTLESNKRTYGPFGIEQGIYFSLPTTGGKIIGFHGKSG 1080 Query: 817 WYIDSIGVHVIEGKVSTPQPSRNASLNYMN-------------------DMPVAEMDNPQ 695 WY+D+IGVH+ K S P S + NY + D+ VA Sbjct: 1081 WYLDAIGVHLKPHKPS-PFKSSVQTQNYFSTGTDRVAYSVVQGGVSRGYDVIVAFRQKDD 1139 Query: 694 WS---------NKLVLAKRGGPNEE-VTFGVVKEPAPCXXXXXXXXXXXXXXXGVF---- 557 ++ N+ + +E+ G V+ VF Sbjct: 1140 YNSNGSAYNFPNQTCYSGESSDSEKGKIIGAVERVPSKVRGAVTYGPWGGKGGFVFDDGV 1199 Query: 556 -TGVKQIFLTRAEAICSIQIEYDRNGQSVWSARHGGSGEATN-KIKFEYPHEVVTCVCGY 383 TGV+QI L+R I SI++ YD+NGQ+VW +++GG+G N KI +YP+EV+T + GY Sbjct: 1200 STGVRQINLSRNIGIVSIKVLYDQNGQAVWGSKNGGTGGFRNDKIVIDYPYEVLTHITGY 1259 Query: 382 YSPINRDDRMKVIKSLTFYTSRGKYGPYXXXXXXXXXXXXXXGKVVGFHGRSSLYLDAIG 203 Y+P +IKSLTF+T++ KYGP+ G +VGFHGR+ L++DAIG Sbjct: 1260 YAP-TMVMGPNIIKSLTFHTTKTKYGPFGEEQGTPFSSNIKEGVIVGFHGRTGLFIDAIG 1318 Query: 202 VHMQHWLGERRP 167 VHM G+ RP Sbjct: 1319 VHMIE--GKARP 1328 Score = 120 bits (302), Expect = 1e-24 Identities = 66/163 (40%), Positives = 98/163 (60%), Gaps = 5/163 (3%) Frame = -3 Query: 1865 ISVGPXXXXXXXXXXXGFYTTVRQLVIAHGAGIDSIQIEYDKKGSAAWSMKHGGSGGIKV 1686 ++ GP G T VRQ+ ++ GI SI++ YD+ G A W K+GG+GG + Sbjct: 1182 VTYGPWGGKGGFVFDDGVSTGVRQINLSRNIGIVSIKVLYDQNGQAVWGSKNGGTGGFRN 1241 Query: 1685 DRIKLDSPEEFLTSISGHYGSIHDWGPIVFVRSLTFQSNRKTYGPYGTQQGNQFSFAMNG 1506 D+I +D P E LT I+G+Y GP + ++SLTF + + YGP+G +QG FS + Sbjct: 1242 DKIVIDYPYEVLTHITGYYAPTMVMGPNI-IKSLTFHTTKTKYGPFGEEQGTPFSSNIKE 1300 Query: 1505 GKIVGFHGRSGWYLDSIGVYL---KALP--KPNPSKALVSSQS 1392 G IVGFHGR+G ++D+IGV++ KA P +P +K L +QS Sbjct: 1301 GVIVGFHGRTGLFIDAIGVHMIEGKARPPTRPPSNKQLNQNQS 1343 Score = 116 bits (290), Expect = 2e-23 Identities = 58/146 (39%), Positives = 83/146 (56%) Frame = -3 Query: 1877 EKKPISVGPXXXXXXXXXXXGFYTTVRQLVIAHGAGIDSIQIEYDKKGSAAWSMKHGGSG 1698 E P GP G ++ ++Q+ + I SIQIEY + G + WS KHGG Sbjct: 1382 EPAPCGPGPWGGDGGRPWDDGVFSGIKQIYLTRAEAICSIQIEYARNGQSIWSTKHGGDY 1441 Query: 1697 GIKVDRIKLDSPEEFLTSISGHYGSIHDWGPIVFVRSLTFQSNRKTYGPYGTQQGNQFSF 1518 G R+KL+ P E ++ I G+YG I P ++SLTF ++R YGP+G + G F+ Sbjct: 1442 GTTTHRVKLEYPHEVVSCICGYYGPISINEPWNAIKSLTFYTSRGKYGPFGEEIGTYFTS 1501 Query: 1517 AMNGGKIVGFHGRSGWYLDSIGVYLK 1440 GK+VGFHGRS YLD+IGV+++ Sbjct: 1502 TRTEGKVVGFHGRSSLYLDAIGVHMQ 1527 >ref|XP_002300741.1| predicted protein [Populus trichocarpa] gi|222842467|gb|EEE80014.1| predicted protein [Populus trichocarpa] Length = 520 Score = 397 bits (1021), Expect(2) = e-157 Identities = 197/350 (56%), Positives = 251/350 (71%), Gaps = 3/350 (0%) Frame = -1 Query: 1180 GGSIFDDGVYTGVRQVNLTRGAGIVSFKVLYDRNGKAIWGNKYGGSGGMKTDKIMFDFPF 1001 GGS FDDG YTG+RQ++L+R GI S +V YDR+G+A WG+K+G GG K+DKI+FD+P+ Sbjct: 172 GGSKFDDGTYTGIRQIHLSRHVGIASIRVQYDRDGQATWGSKHGKGGGFKSDKIIFDYPY 231 Query: 1000 EALTHITGYYGPLMYMGPSVIKSLSFHTNKKIYGPYGDEQGTPFSSNLKEGKIVGFFGKR 821 E LT +TG YGPLMYMGP++I+SL+F+TNK +GP+G+EQG F++ + EGKI+GF G+ Sbjct: 232 EILTRVTGTYGPLMYMGPNIIRSLTFYTNKGKHGPFGEEQGPTFTNKIDEGKIIGFHGRE 291 Query: 820 GWYIDSIGVHVIEGKVSTPQPSRNASLNYMNDMPVAEMDNPQWSNKLVLAKRGGPNEEVT 641 G+ +D+IGVHV+EG V P + + VAE+DN WSNKLV A R G EEV Sbjct: 292 GFLLDAIGVHVLEGTVK-PAKHHLSDAIKQAEADVAEIDNSPWSNKLV-AARPGQTEEVV 349 Query: 640 FGVVKEPAPCXXXXXXXXXXXXXXXGVFTGVKQIFLTRAEAICSIQIEYDRNGQSVWSAR 461 GV+KEPAPC GVF+G+KQIF+TRAEA+CSIQIEYDRNGQSVWS + Sbjct: 350 CGVIKEPAPCGPGPWGGDGGRPWDDGVFSGIKQIFITRAEAMCSIQIEYDRNGQSVWSIK 409 Query: 460 HGGS-GEATNKIKFEYPHEVVTCVCGYYSPINRD-DRMKVIKSLTFYTSRGKYGPYXXXX 287 HGG+ G AT+++K + PHEV+ C+ GYY PI D + KVIKSLTF+TSRG YGP+ Sbjct: 410 HGGNGGTATHRVKLQCPHEVLVCLSGYYGPIGSDGNSPKVIKSLTFHTSRGNYGPFGEEI 469 Query: 286 XXXXXXXXXXGKVVGFHGRSSLYLDAIGVHMQHWLGERR-PGKSKFYKLW 140 GKVVGFHGRSS Y+DAIGVHMQHWLG R P S +K++ Sbjct: 470 GTFFTSTTTEGKVVGFHGRSSAYMDAIGVHMQHWLGNHRSPKPSSLFKIF 519 Score = 184 bits (468), Expect(2) = e-157 Identities = 85/132 (64%), Positives = 109/132 (82%) Frame = -3 Query: 1679 IKLDSPEEFLTSISGHYGSIHDWGPIVFVRSLTFQSNRKTYGPYGTQQGNQFSFAMNGGK 1500 +KLD P+EFLTS+ G+YGS+ WGP VFVRSLTF+SN+KTYGP+G +QG FSF M+GGK Sbjct: 5 VKLDCPDEFLTSVHGYYGSLDGWGP-VFVRSLTFRSNKKTYGPFGVEQGTYFSFPMSGGK 63 Query: 1499 IVGFHGRSGWYLDSIGVYLKALPKPNPSKALVSSQSFVANGTDKIGYNVVQGSLGKGFDV 1320 IVGFHG+SGWYLD+IG+YLK L K SKALV S+S++ NGT+ I Y+++QG+ G GFD+ Sbjct: 64 IVGFHGKSGWYLDAIGIYLKPLQKQKTSKALVQSKSYINNGTENISYSMMQGA-GNGFDI 122 Query: 1319 VLAVRQNDDFTK 1284 +AV+Q DDF K Sbjct: 123 FVAVKQKDDFGK 134 Score = 179 bits (454), Expect = 2e-42 Identities = 118/323 (36%), Positives = 169/323 (52%), Gaps = 31/323 (9%) Frame = -1 Query: 1036 MKTDKIMFDFPFEALTHITGYYGPLMYMGPSVIKSLSFHTNKKIYGPYGDEQGTPFSSNL 857 MKT + D P E LT + GYYG L GP ++SL+F +NKK YGP+G EQGT FS + Sbjct: 1 MKTT-VKLDCPDEFLTSVHGYYGSLDGWGPVFVRSLTFRSNKKTYGPFGVEQGTYFSFPM 59 Query: 856 KEGKIVGFFGKRGWYIDSIGVH------------VIEGKVSTPQPSRNASLNYMN----- 728 GKIVGF GK GWY+D+IG++ +++ K + N S + M Sbjct: 60 SGGKIVGFHGKSGWYLDAIGIYLKPLQKQKTSKALVQSKSYINNGTENISYSMMQGAGNG 119 Query: 727 -DMPVAEMDNPQW-----SNKL-------VLAKRGGPNEEVTFGVVKEPAPCXXXXXXXX 587 D+ VA + N L +A P++ T GV+ Sbjct: 120 FDIFVAVKQKDDFGKFSTQNSLEYSIMIQTIATERVPSK--TEGVI------VHGPWGGV 171 Query: 586 XXXXXXXGVFTGVKQIFLTRAEAICSIQIEYDRNGQSVWSARHG-GSGEATNKIKFEYPH 410 G +TG++QI L+R I SI+++YDR+GQ+ W ++HG G G ++KI F+YP+ Sbjct: 172 GGSKFDDGTYTGIRQIHLSRHVGIASIRVQYDRDGQATWGSKHGKGGGFKSDKIIFDYPY 231 Query: 409 EVVTCVCGYYSPINRDDRMKVIKSLTFYTSRGKYGPYXXXXXXXXXXXXXXGKVVGFHGR 230 E++T V G Y P+ +I+SLTFYT++GK+GP+ GK++GFHGR Sbjct: 232 EILTRVTGTYGPLMYMG-PNIIRSLTFYTNKGKHGPFGEEQGPTFTNKIDEGKIIGFHGR 290 Query: 229 SSLYLDAIGVHMQHWLGERRPGK 161 LDAIGVH+ G +P K Sbjct: 291 EGFLLDAIGVHVLE--GTVKPAK 311 Score = 124 bits (311), Expect = 9e-26 Identities = 60/130 (46%), Positives = 87/130 (66%), Gaps = 1/130 (0%) Frame = -3 Query: 1811 YTTVRQLVIAHGAGIDSIQIEYDKKGSAAWSMKHGGSGGIKVDRIKLDSPEEFLTSISGH 1632 YT +RQ+ ++ GI SI+++YD+ G A W KHG GG K D+I D P E LT ++G Sbjct: 181 YTGIRQIHLSRHVGIASIRVQYDRDGQATWGSKHGKGGGFKSDKIIFDYPYEILTRVTGT 240 Query: 1631 YGSIHDWGPIVFVRSLTFQSNRKTYGPYGTQQGNQFSFAMNGGKIVGFHGRSGWYLDSIG 1452 YG + GP + +RSLTF +N+ +GP+G +QG F+ ++ GKI+GFHGR G+ LD+IG Sbjct: 241 YGPLMYMGPNI-IRSLTFYTNKGKHGPFGEEQGPTFTNKIDEGKIIGFHGREGFLLDAIG 299 Query: 1451 VY-LKALPKP 1425 V+ L+ KP Sbjct: 300 VHVLEGTVKP 309 Score = 122 bits (306), Expect = 3e-25 Identities = 60/147 (40%), Positives = 86/147 (58%), Gaps = 1/147 (0%) Frame = -3 Query: 1877 EKKPISVGPXXXXXXXXXXXGFYTTVRQLVIAHGAGIDSIQIEYDKKGSAAWSMKHGGSG 1698 E P GP G ++ ++Q+ I + SIQIEYD+ G + WS+KHGG+G Sbjct: 355 EPAPCGPGPWGGDGGRPWDDGVFSGIKQIFITRAEAMCSIQIEYDRNGQSVWSIKHGGNG 414 Query: 1697 GIKVDRIKLDSPEEFLTSISGHYGSI-HDWGPIVFVRSLTFQSNRKTYGPYGTQQGNQFS 1521 G R+KL P E L +SG+YG I D ++SLTF ++R YGP+G + G F+ Sbjct: 415 GTATHRVKLQCPHEVLVCLSGYYGPIGSDGNSPKVIKSLTFHTSRGNYGPFGEEIGTFFT 474 Query: 1520 FAMNGGKIVGFHGRSGWYLDSIGVYLK 1440 GK+VGFHGRS Y+D+IGV+++ Sbjct: 475 STTTEGKVVGFHGRSSAYMDAIGVHMQ 501 >emb|CBI19765.3| unnamed protein product [Vitis vinifera] Length = 670 Score = 432 bits (1110), Expect = e-118 Identities = 217/395 (54%), Positives = 269/395 (68%), Gaps = 15/395 (3%) Frame = -1 Query: 1279 RQTSSQGN--------RLLRAIVKKNQMIRCFFLLALRMDSGGSIFDDGVYTGVRQVNLT 1124 RQTS G +++ A+ + +R GG +FDDGV TGVRQ+NL+ Sbjct: 275 RQTSRSGESSDAETKGKIIGAVERVPSKVRGAVTYGPWGGKGGFVFDDGVSTGVRQINLS 334 Query: 1123 RGAGIVSFKVLYDRNGKAIWGNKYGGSGGMKTDKIMFDFPFEALTHITGYYGPLMYMGPS 944 R GIVS KVLYD+NG+A+WG+K GG+GG + DKI+ D+P+E LTHITGYY P M MGP+ Sbjct: 335 RNIGIVSIKVLYDQNGQAVWGSKNGGTGGFRNDKIVIDYPYEVLTHITGYYAPTMVMGPN 394 Query: 943 VIKSLSFHTNKKIYGPYGDEQGTPFSSNLKEGKIVGFFGKRGWYIDSIGVHVIEGKVSTP 764 +IKSL+FHT K YGP+G+EQGTPFSSN+KEG IVGF G+ G +ID+IGVH+IEGK P Sbjct: 395 IIKSLTFHTTKTKYGPFGEEQGTPFSSNIKEGVIVGFHGRTGLFIDAIGVHMIEGKARPP 454 Query: 763 -QPSRNASLNYMNDM-----PVAEMDNPQWSNKLVLAKRGGPNEEVTFGVVKEPAPCXXX 602 +P N LN AE+D P W + + +GGP EEV GVVKEPAPC Sbjct: 455 TRPPSNKQLNQNQSQIQVLDNAAEVDRPLWYSNKSVPTKGGPFEEVGSGVVKEPAPCGPG 514 Query: 601 XXXXXXXXXXXXGVFTGVKQIFLTRAEAICSIQIEYDRNGQSVWSARHGGS-GEATNKIK 425 GVF+G+KQI+LTRAEAICSIQIEY RNGQS+WS +HGG G T+++K Sbjct: 515 PWGGDGGRPWDDGVFSGIKQIYLTRAEAICSIQIEYARNGQSIWSTKHGGDYGTTTHRVK 574 Query: 424 FEYPHEVVTCVCGYYSPINRDDRMKVIKSLTFYTSRGKYGPYXXXXXXXXXXXXXXGKVV 245 EYPHEVV+C+CGYY PI+ ++ IKSLTFYTSRGKYGP+ GKVV Sbjct: 575 LEYPHEVVSCICGYYGPISINEPWNAIKSLTFYTSRGKYGPFGEEIGTYFTSTRTEGKVV 634 Query: 244 GFHGRSSLYLDAIGVHMQHWLGERRPGKSKFYKLW 140 GFHGRSSLYLDAIGVHMQHWLG++R K +K++ Sbjct: 635 GFHGRSSLYLDAIGVHMQHWLGDQRTLKPNLFKIF 669 Score = 244 bits (623), Expect = 6e-62 Identities = 117/193 (60%), Positives = 149/193 (77%) Frame = -3 Query: 1868 PISVGPXXXXXXXXXXXGFYTTVRQLVIAHGAGIDSIQIEYDKKGSAAWSMKHGGSGGIK 1689 PISVGP G Y+TVRQLVIAHG GIDSI IEYDK GS+ WS KHGGSGG + Sbjct: 40 PISVGPWGGQDGLRWDDGVYSTVRQLVIAHGVGIDSILIEYDKNGSSVWSEKHGGSGGTR 99 Query: 1688 VDRIKLDSPEEFLTSISGHYGSIHDWGPIVFVRSLTFQSNRKTYGPYGTQQGNQFSFAMN 1509 +R+KLDSP+EFLTSI GHYGS+ + GP VFVRSLT +SN++TYGP+G +QG FS Sbjct: 100 TNRVKLDSPDEFLTSIHGHYGSLLERGP-VFVRSLTLESNKRTYGPFGIEQGIYFSLPTT 158 Query: 1508 GGKIVGFHGRSGWYLDSIGVYLKALPKPNPSKALVSSQSFVANGTDKIGYNVVQGSLGKG 1329 GGKI+GFHG+SGWYLD+IGV+LK KP+P K+ V +Q++ + GTD++ Y+VVQG + +G Sbjct: 159 GGKIIGFHGKSGWYLDAIGVHLKP-HKPSPFKSSVQTQNYFSTGTDRVAYSVVQGGVSRG 217 Query: 1328 FDVVLAVRQNDDF 1290 +DV++A RQ DD+ Sbjct: 218 YDVIVAFRQKDDY 230 Score = 145 bits (367), Expect = 3e-32 Identities = 71/150 (47%), Positives = 98/150 (65%) Frame = -1 Query: 1177 GSIFDDGVYTGVRQVNLTRGAGIVSFKVLYDRNGKAIWGNKYGGSGGMKTDKIMFDFPFE 998 G +DDGVY+ VRQ+ + G GI S + YD+NG ++W K+GGSGG +T+++ D P E Sbjct: 51 GLRWDDGVYSTVRQLVIAHGVGIDSILIEYDKNGSSVWSEKHGGSGGTRTNRVKLDSPDE 110 Query: 997 ALTHITGYYGPLMYMGPSVIKSLSFHTNKKIYGPYGDEQGTPFSSNLKEGKIVGFFGKRG 818 LT I G+YG L+ GP ++SL+ +NK+ YGP+G EQG FS GKI+GF GK G Sbjct: 111 FLTSIHGHYGSLLERGPVFVRSLTLESNKRTYGPFGIEQGIYFSLPTTGGKIIGFHGKSG 170 Query: 817 WYIDSIGVHVIEGKVSTPQPSRNASLNYMN 728 WY+D+IGVH+ K S P S + NY + Sbjct: 171 WYLDAIGVHLKPHKPS-PFKSSVQTQNYFS 199 Score = 120 bits (302), Expect = 1e-24 Identities = 66/163 (40%), Positives = 98/163 (60%), Gaps = 5/163 (3%) Frame = -3 Query: 1865 ISVGPXXXXXXXXXXXGFYTTVRQLVIAHGAGIDSIQIEYDKKGSAAWSMKHGGSGGIKV 1686 ++ GP G T VRQ+ ++ GI SI++ YD+ G A W K+GG+GG + Sbjct: 307 VTYGPWGGKGGFVFDDGVSTGVRQINLSRNIGIVSIKVLYDQNGQAVWGSKNGGTGGFRN 366 Query: 1685 DRIKLDSPEEFLTSISGHYGSIHDWGPIVFVRSLTFQSNRKTYGPYGTQQGNQFSFAMNG 1506 D+I +D P E LT I+G+Y GP + ++SLTF + + YGP+G +QG FS + Sbjct: 367 DKIVIDYPYEVLTHITGYYAPTMVMGPNI-IKSLTFHTTKTKYGPFGEEQGTPFSSNIKE 425 Query: 1505 GKIVGFHGRSGWYLDSIGVYL---KALP--KPNPSKALVSSQS 1392 G IVGFHGR+G ++D+IGV++ KA P +P +K L +QS Sbjct: 426 GVIVGFHGRTGLFIDAIGVHMIEGKARPPTRPPSNKQLNQNQS 468 Score = 116 bits (290), Expect = 2e-23 Identities = 58/146 (39%), Positives = 83/146 (56%) Frame = -3 Query: 1877 EKKPISVGPXXXXXXXXXXXGFYTTVRQLVIAHGAGIDSIQIEYDKKGSAAWSMKHGGSG 1698 E P GP G ++ ++Q+ + I SIQIEY + G + WS KHGG Sbjct: 507 EPAPCGPGPWGGDGGRPWDDGVFSGIKQIYLTRAEAICSIQIEYARNGQSIWSTKHGGDY 566 Query: 1697 GIKVDRIKLDSPEEFLTSISGHYGSIHDWGPIVFVRSLTFQSNRKTYGPYGTQQGNQFSF 1518 G R+KL+ P E ++ I G+YG I P ++SLTF ++R YGP+G + G F+ Sbjct: 567 GTTTHRVKLEYPHEVVSCICGYYGPISINEPWNAIKSLTFYTSRGKYGPFGEEIGTYFTS 626 Query: 1517 AMNGGKIVGFHGRSGWYLDSIGVYLK 1440 GK+VGFHGRS YLD+IGV+++ Sbjct: 627 TRTEGKVVGFHGRSSLYLDAIGVHMQ 652 Score = 99.0 bits (245), Expect = 4e-18 Identities = 50/125 (40%), Positives = 76/125 (60%), Gaps = 1/125 (0%) Frame = -1 Query: 562 VFTGVKQIFLTRAEAICSIQIEYDRNGQSVWSARHGGS-GEATNKIKFEYPHEVVTCVCG 386 V++ V+Q+ + I SI IEYD+NG SVWS +HGGS G TN++K + P E +T + G Sbjct: 58 VYSTVRQLVIAHGVGIDSILIEYDKNGSSVWSEKHGGSGGTRTNRVKLDSPDEFLTSIHG 117 Query: 385 YYSPINRDDRMKVIKSLTFYTSRGKYGPYXXXXXXXXXXXXXXGKVVGFHGRSSLYLDAI 206 +Y + + ++SLT +++ YGP+ GK++GFHG+S YLDAI Sbjct: 118 HYGSLLERGPV-FVRSLTLESNKRTYGPFGIEQGIYFSLPTTGGKIIGFHGKSGWYLDAI 176 Query: 205 GVHMQ 191 GVH++ Sbjct: 177 GVHLK 181 >ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223551153|gb|EEF52639.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 1218 Score = 418 bits (1075), Expect = e-114 Identities = 208/355 (58%), Positives = 259/355 (72%), Gaps = 7/355 (1%) Frame = -1 Query: 1183 SGGSIFDDGVYTGVRQVNLTRGAGIVSFKVLYDRNGKAIWGNKYGGSGGMKTDKIMFDFP 1004 +GG FDDG TG+RQ+ L+R GIVS +V YDRNG+A+WG+K+GG+GG KT+KI FD+P Sbjct: 871 TGGYTFDDGTNTGIRQIYLSRSIGIVSIRVQYDRNGQAVWGSKHGGTGGFKTEKITFDYP 930 Query: 1003 FEALTHITGYYGPLMYMGPSVIKSLSFHTNKKIYGPYGDEQGTPFSSNLKEGKIVGFFGK 824 +E LTHI+G YGPLM+MGP++IKSL+F+TNK +GP+GDEQG FS+ GKIVGF GK Sbjct: 931 YEILTHISGTYGPLMFMGPNIIKSLTFYTNKGKHGPFGDEQGPSFSTKPNGGKIVGFHGK 990 Query: 823 RGWYIDSIGVHVIEGKVSTPQPSRNASLNYMND------MPVAEMDNPQWSNKLVLAKRG 662 G ++D+IGV+++EGKV +P+R +Y+ D V E+DN WSNKLVLA+R Sbjct: 991 EGLFLDAIGVNLMEGKV---KPAR----HYLTDAIIQAEADVTEIDNSPWSNKLVLARR- 1042 Query: 661 GPNEEVTFGVVKEPAPCXXXXXXXXXXXXXXXGVFTGVKQIFLTRAEAICSIQIEYDRNG 482 GP +EV VVKEPAPC GVF+G+KQIF+TRAEAICSIQIEYDRNG Sbjct: 1043 GPTDEVACSVVKEPAPCGPGPWGGDGGRPWDDGVFSGIKQIFVTRAEAICSIQIEYDRNG 1102 Query: 481 QSVWSARHGGS-GEATNKIKFEYPHEVVTCVCGYYSPINRDDRMKVIKSLTFYTSRGKYG 305 QSVWS RHGGS G ATN++K EYPHEV+T + GYY P +RD+R V+KSLTFYTSRG+YG Sbjct: 1103 QSVWSVRHGGSGGTATNRVKLEYPHEVLTRISGYYGPASRDERPTVVKSLTFYTSRGQYG 1162 Query: 304 PYXXXXXXXXXXXXXXGKVVGFHGRSSLYLDAIGVHMQHWLGERRPGKSKFYKLW 140 P+ GKVVGFHGR YLDAIGVHMQHWLG R +S +K++ Sbjct: 1163 PFGEEIGTFFTSTTTEGKVVGFHGRCGAYLDAIGVHMQHWLGNNRTSRSSLFKIF 1217 Score = 261 bits (667), Expect = 5e-67 Identities = 119/195 (61%), Positives = 157/195 (80%) Frame = -3 Query: 1877 EKKPISVGPXXXXXXXXXXXGFYTTVRQLVIAHGAGIDSIQIEYDKKGSAAWSMKHGGSG 1698 EKKPI+VGP G Y+TVRQLVI HG+GIDSIQIEYDKKG++ WS KHGG+G Sbjct: 629 EKKPIAVGPWGGQNGCRWDDGVYSTVRQLVIVHGSGIDSIQIEYDKKGTSIWSEKHGGNG 688 Query: 1697 GIKVDRIKLDSPEEFLTSISGHYGSIHDWGPIVFVRSLTFQSNRKTYGPYGTQQGNQFSF 1518 G + D++KLD P+E+L S+SGHYGS++ WGP VFVRSLTFQSN++TYGP+G +QG FSF Sbjct: 689 GNRTDKVKLDYPDEYLASVSGHYGSLNQWGP-VFVRSLTFQSNKRTYGPFGVEQGTYFSF 747 Query: 1517 AMNGGKIVGFHGRSGWYLDSIGVYLKALPKPNPSKALVSSQSFVANGTDKIGYNVVQGSL 1338 M GG+IVGFHG+ G+++D+IG+YLK +P+ SKALV ++SFV NGT+ IGY+V+QG+ Sbjct: 748 PMTGGRIVGFHGKGGYFVDAIGIYLKPVPQQKSSKALVQAKSFVNNGTENIGYSVIQGTA 807 Query: 1337 GKGFDVVLAVRQNDD 1293 G +D+V+AVRQ ++ Sbjct: 808 GNSYDIVVAVRQKEE 822 Score = 142 bits (358), Expect = 3e-31 Identities = 62/130 (47%), Positives = 94/130 (72%) Frame = -1 Query: 1177 GSIFDDGVYTGVRQVNLTRGAGIVSFKVLYDRNGKAIWGNKYGGSGGMKTDKIMFDFPFE 998 G +DDGVY+ VRQ+ + G+GI S ++ YD+ G +IW K+GG+GG +TDK+ D+P E Sbjct: 643 GCRWDDGVYSTVRQLVIVHGSGIDSIQIEYDKKGTSIWSEKHGGNGGNRTDKVKLDYPDE 702 Query: 997 ALTHITGYYGPLMYMGPSVIKSLSFHTNKKIYGPYGDEQGTPFSSNLKEGKIVGFFGKRG 818 L ++G+YG L GP ++SL+F +NK+ YGP+G EQGT FS + G+IVGF GK G Sbjct: 703 YLASVSGHYGSLNQWGPVFVRSLTFQSNKRTYGPFGVEQGTYFSFPMTGGRIVGFHGKGG 762 Query: 817 WYIDSIGVHV 788 +++D+IG+++ Sbjct: 763 YFVDAIGIYL 772 Score = 131 bits (329), Expect = 7e-28 Identities = 61/122 (50%), Positives = 84/122 (68%) Frame = -3 Query: 1808 TTVRQLVIAHGAGIDSIQIEYDKKGSAAWSMKHGGSGGIKVDRIKLDSPEEFLTSISGHY 1629 T +RQ+ ++ GI SI+++YD+ G A W KHGG+GG K ++I D P E LT ISG Y Sbjct: 882 TGIRQIYLSRSIGIVSIRVQYDRNGQAVWGSKHGGTGGFKTEKITFDYPYEILTHISGTY 941 Query: 1628 GSIHDWGPIVFVRSLTFQSNRKTYGPYGTQQGNQFSFAMNGGKIVGFHGRSGWYLDSIGV 1449 G + GP + ++SLTF +N+ +GP+G +QG FS NGGKIVGFHG+ G +LD+IGV Sbjct: 942 GPLMFMGPNI-IKSLTFYTNKGKHGPFGDEQGPSFSTKPNGGKIVGFHGKEGLFLDAIGV 1000 Query: 1448 YL 1443 L Sbjct: 1001 NL 1002 Score = 127 bits (319), Expect = 1e-26 Identities = 65/147 (44%), Positives = 91/147 (61%), Gaps = 1/147 (0%) Frame = -3 Query: 1877 EKKPISVGPXXXXXXXXXXXGFYTTVRQLVIAHGAGIDSIQIEYDKKGSAAWSMKHGGSG 1698 E P GP G ++ ++Q+ + I SIQIEYD+ G + WS++HGGSG Sbjct: 1055 EPAPCGPGPWGGDGGRPWDDGVFSGIKQIFVTRAEAICSIQIEYDRNGQSVWSVRHGGSG 1114 Query: 1697 GIKVDRIKLDSPEEFLTSISGHYG-SIHDWGPIVFVRSLTFQSNRKTYGPYGTQQGNQFS 1521 G +R+KL+ P E LT ISG+YG + D P V V+SLTF ++R YGP+G + G F+ Sbjct: 1115 GTATNRVKLEYPHEVLTRISGYYGPASRDERPTV-VKSLTFYTSRGQYGPFGEEIGTFFT 1173 Query: 1520 FAMNGGKIVGFHGRSGWYLDSIGVYLK 1440 GK+VGFHGR G YLD+IGV+++ Sbjct: 1174 STTTEGKVVGFHGRCGAYLDAIGVHMQ 1200 Score = 99.0 bits (245), Expect = 4e-18 Identities = 46/125 (36%), Positives = 78/125 (62%), Gaps = 1/125 (0%) Frame = -1 Query: 562 VFTGVKQIFLTRAEAICSIQIEYDRNGQSVWSARHGGS-GEATNKIKFEYPHEVVTCVCG 386 V++ V+Q+ + I SIQIEYD+ G S+WS +HGG+ G T+K+K +YP E + V G Sbjct: 650 VYSTVRQLVIVHGSGIDSIQIEYDKKGTSIWSEKHGGNGGNRTDKVKLDYPDEYLASVSG 709 Query: 385 YYSPINRDDRMKVIKSLTFYTSRGKYGPYXXXXXXXXXXXXXXGKVVGFHGRSSLYLDAI 206 +Y +N+ + ++SLTF +++ YGP+ G++VGFHG+ ++DAI Sbjct: 710 HYGSLNQWGPV-FVRSLTFQSNKRTYGPFGVEQGTYFSFPMTGGRIVGFHGKGGYFVDAI 768 Query: 205 GVHMQ 191 G++++ Sbjct: 769 GIYLK 773 >ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp. lyrata] gi|297338906|gb|EFH69323.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp. lyrata] Length = 1490 Score = 402 bits (1033), Expect = e-109 Identities = 198/347 (57%), Positives = 251/347 (72%), Gaps = 4/347 (1%) Frame = -1 Query: 1183 SGGSIFDDGVYTGVRQVNLTRGAGIVSFKVLYDRNGKAIWGNKYGGSGGMKTDKIMFDFP 1004 +GG +FDDG+YTG+RQ+NL+R GIVS KV YD G+A+WG+K+GG GG K DKI+FD+P Sbjct: 1137 TGGIMFDDGIYTGIRQINLSRSVGIVSIKVCYDFRGQAVWGSKHGGMGGFKHDKIVFDYP 1196 Query: 1003 FEALTHITGYYGPLMYMGPSVIKSLSFHTNKKIYGPYGDEQGTPFSSNLKEGKIVGFFGK 824 E LTH+TG YGPLMYMGP+VIKSL+F TN+ +GPYG+EQG F+ + EGK+VGF G+ Sbjct: 1197 SEVLTHVTGTYGPLMYMGPNVIKSLTFRTNRGKHGPYGEEQGPSFTHQIDEGKVVGFLGR 1256 Query: 823 RGWYIDSIGVHVIEGKVSTPQP-SRNASLNYMNDMPVAEMDNPQWSNKLVLAKRGGPNEE 647 G ++DSIGVHV+E K+S+ +P S N S+ N+ A+++N W+NKLVLA G EE Sbjct: 1257 EGLFLDSIGVHVMECKISSLKPASPNNSIVPHNNSGTAQIENSPWANKLVLA-ANGHGEE 1315 Query: 646 VTFGVVKEPAPCXXXXXXXXXXXXXXXGVFTGVKQIFLTRA-EAICSIQIEYDRNGQSVW 470 V GVVKEP P GVF+G+KQIF+TR + I SIQ+EYDRNGQSVW Sbjct: 1316 VDRGVVKEPTPSGSGPWGGDGGQAWDDGVFSGIKQIFVTRGNDVISSIQVEYDRNGQSVW 1375 Query: 469 SARHGG--SGEATNKIKFEYPHEVVTCVCGYYSPINRDDRMKVIKSLTFYTSRGKYGPYX 296 S +HGG +G AT++IK EYP+E +TC+ GYY P+N DR V+KSL+FYTSRGKYGPY Sbjct: 1376 STKHGGDNNGVATHRIKLEYPNETITCISGYYGPLNNSDRYNVVKSLSFYTSRGKYGPYG 1435 Query: 295 XXXXXXXXXXXXXGKVVGFHGRSSLYLDAIGVHMQHWLGERRPGKSK 155 GKV+GFHGRSS +LDAIGVHMQHWLG +P S+ Sbjct: 1436 EETGTFFTSTTTQGKVLGFHGRSSSHLDAIGVHMQHWLGNNKPYYSR 1482 Score = 213 bits (543), Expect = 1e-52 Identities = 104/196 (53%), Positives = 137/196 (69%), Gaps = 2/196 (1%) Frame = -3 Query: 1877 EKKPISVGPXXXXXXXXXXXGFYTTVRQLVIAHGAGIDSIQIEYDKKGSAAWSMKHGGSG 1698 E KP SVGP G YTTV+Q++IAHG+GIDSIQ+EYDK GS+ WS K GG G Sbjct: 898 EGKPASVGPWGGQCGHAWDDGMYTTVKQIIIAHGSGIDSIQVEYDKNGSSVWSEKRGGKG 957 Query: 1697 GIKVDRIKLDSPEEFLTSISGHYGSIHDWGPIVFVRSLTFQSNRKTYGPYGTQQGNQFSF 1518 G K D++KLD P E+L SI+G YGS WG + VRSLTF+SNR+ YGP+G + G F+ Sbjct: 958 GKKFDKVKLDYPHEYLISINGTYGSFDVWGTLC-VRSLTFESNRRKYGPFGVESGTFFAL 1016 Query: 1517 AMNGGKIVGFHGRSGWYLDSIGVYLKALPKPN--PSKALVSSQSFVANGTDKIGYNVVQG 1344 +G KIVGFHG++GWYLD+IGV+++ +PK N SK L+ S G K Y+V+QG Sbjct: 1017 PKSGSKIVGFHGKAGWYLDAIGVHIQPVPKENNPSSKILLHSHQSFPQGDKKHEYSVIQG 1076 Query: 1343 SLGKGFDVVLAVRQND 1296 S+G+ FD+V+A+R+ D Sbjct: 1077 SVGQNFDIVVALRKKD 1092 Score = 137 bits (345), Expect = 1e-29 Identities = 62/130 (47%), Positives = 85/130 (65%) Frame = -1 Query: 1177 GSIFDDGVYTGVRQVNLTRGAGIVSFKVLYDRNGKAIWGNKYGGSGGMKTDKIMFDFPFE 998 G +DDG+YT V+Q+ + G+GI S +V YD+NG ++W K GG GG K DK+ D+P E Sbjct: 912 GHAWDDGMYTTVKQIIIAHGSGIDSIQVEYDKNGSSVWSEKRGGKGGKKFDKVKLDYPHE 971 Query: 997 ALTHITGYYGPLMYMGPSVIKSLSFHTNKKIYGPYGDEQGTPFSSNLKEGKIVGFFGKRG 818 L I G YG G ++SL+F +N++ YGP+G E GT F+ KIVGF GK G Sbjct: 972 YLISINGTYGSFDVWGTLCVRSLTFESNRRKYGPFGVESGTFFALPKSGSKIVGFHGKAG 1031 Query: 817 WYIDSIGVHV 788 WY+D+IGVH+ Sbjct: 1032 WYLDAIGVHI 1041 Score = 127 bits (318), Expect = 1e-26 Identities = 66/156 (42%), Positives = 95/156 (60%), Gaps = 5/156 (3%) Frame = -3 Query: 1856 GPXXXXXXXXXXXGFYTTVRQLVIAHGAGIDSIQIEYDKKGSAAWSMKHGGSGGIKVDRI 1677 GP G YT +RQ+ ++ GI SI++ YD +G A W KHGG GG K D+I Sbjct: 1132 GPWGGTGGIMFDDGIYTGIRQINLSRSVGIVSIKVCYDFRGQAVWGSKHGGMGGFKHDKI 1191 Query: 1676 KLDSPEEFLTSISGHYGSIHDWGPIVFVRSLTFQSNRKTYGPYGTQQGNQFSFAMNGGKI 1497 D P E LT ++G YG + GP V ++SLTF++NR +GPYG +QG F+ ++ GK+ Sbjct: 1192 VFDYPSEVLTHVTGTYGPLMYMGPNV-IKSLTFRTNRGKHGPYGEEQGPSFTHQIDEGKV 1250 Query: 1496 VGFHGRSGWYLDSIGVY-----LKALPKPNPSKALV 1404 VGF GR G +LDSIGV+ + +L +P+ ++V Sbjct: 1251 VGFLGREGLFLDSIGVHVMECKISSLKPASPNNSIV 1286 Score = 116 bits (291), Expect = 2e-23 Identities = 59/148 (39%), Positives = 89/148 (60%), Gaps = 2/148 (1%) Frame = -3 Query: 1877 EKKPISVGPXXXXXXXXXXXGFYTTVRQLVIAHGAG-IDSIQIEYDKKGSAAWSMKHGG- 1704 E P GP G ++ ++Q+ + G I SIQ+EYD+ G + WS KHGG Sbjct: 1323 EPTPSGSGPWGGDGGQAWDDGVFSGIKQIFVTRGNDVISSIQVEYDRNGQSVWSTKHGGD 1382 Query: 1703 SGGIKVDRIKLDSPEEFLTSISGHYGSIHDWGPIVFVRSLTFQSNRKTYGPYGTQQGNQF 1524 + G+ RIKL+ P E +T ISG+YG +++ V+SL+F ++R YGPYG + G F Sbjct: 1383 NNGVATHRIKLEYPNETITCISGYYGPLNNSDRYNVVKSLSFYTSRGKYGPYGEETGTFF 1442 Query: 1523 SFAMNGGKIVGFHGRSGWYLDSIGVYLK 1440 + GK++GFHGRS +LD+IGV+++ Sbjct: 1443 TSTTTQGKVLGFHGRSSSHLDAIGVHMQ 1470 Score = 107 bits (266), Expect = 1e-20 Identities = 55/133 (41%), Positives = 78/133 (58%), Gaps = 1/133 (0%) Frame = -1 Query: 562 VFTGVKQIFLTRAEAICSIQIEYDRNGQSVWSARHGGSG-EATNKIKFEYPHEVVTCVCG 386 ++T VKQI + I SIQ+EYD+NG SVWS + GG G + +K+K +YPHE + + G Sbjct: 919 MYTTVKQIIIAHGSGIDSIQVEYDKNGSSVWSEKRGGKGGKKFDKVKLDYPHEYLISING 978 Query: 385 YYSPINRDDRMKVIKSLTFYTSRGKYGPYXXXXXXXXXXXXXXGKVVGFHGRSSLYLDAI 206 Y + + ++SLTF ++R KYGP+ K+VGFHG++ YLDAI Sbjct: 979 TYGSFDVWGTL-CVRSLTFESNRRKYGPFGVESGTFFALPKSGSKIVGFHGKAGWYLDAI 1037 Query: 205 GVHMQHWLGERRP 167 GVH+Q E P Sbjct: 1038 GVHIQPVPKENNP 1050