BLASTX nr result

ID: Cimicifuga21_contig00010605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010605
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267225.2| PREDICTED: uncharacterized protein LOC100247...   316   5e-84
emb|CAN72961.1| hypothetical protein VITISV_016489 [Vitis vinifera]   316   5e-84
ref|XP_004150388.1| PREDICTED: uncharacterized protein LOC101212...   311   2e-82
ref|XP_003543366.1| PREDICTED: ribosomal RNA processing protein ...   300   4e-79
ref|XP_002874005.1| hypothetical protein ARALYDRAFT_910101 [Arab...   299   9e-79

>ref|XP_002267225.2| PREDICTED: uncharacterized protein LOC100247924 [Vitis vinifera]
          Length = 547

 Score =  316 bits (810), Expect = 5e-84
 Identities = 173/330 (52%), Positives = 216/330 (65%), Gaps = 4/330 (1%)
 Frame = +3

Query: 78   KHLASCNKTTRDKALHLLKTWLPSQTEVSDDEMKKIWKGLFYCVWHADKQQFQIELINRX 257
            +HLASC+K+TRD+AL LL TWLPSQ++VS+++MKK+WKGLFY +WHADK   Q +LI+R 
Sbjct: 7    RHLASCDKSTRDEALRLLHTWLPSQSQVSEEDMKKVWKGLFYSLWHADKTPVQSDLIDRL 66

Query: 258  XXXXXXXXXXXXIHYFEVFLLTIRREWSGIDYLRLDKFYXXXXXXXXXXXXXXKKNGWDS 437
                        IHYF VFLLT+RREW GID LRLDKFY              K N WD 
Sbjct: 67   ASLLTTLNLPLSIHYFSVFLLTMRREWPGIDALRLDKFYLLIRKFMYNFFLVLKNNSWDL 126

Query: 438  ELVSRFIGVLEEKTLLSGDNFPAHGVNYHLVEVFLEELKSFLPLKLETVEVLVNPFVSVL 617
            E+  R I VLE    L    F  +GV YH+  VFLEEL+ FLP++ E V VL  PFV V+
Sbjct: 127  EISKRLIVVLE----LEDGRFSGNGVGYHVASVFLEELRPFLPVRREIVSVLFEPFVEVM 182

Query: 618  GKSLDKVLLNKIKSSLFGCLLENGKKLLERKKVGDGAEEGGNEVELFGTMALTLGLSRKF 797
            G+S DKVL+ K+KS++F  L+  G++LLE K++G G E G  +   FGT+A+  G S+KF
Sbjct: 183  GRSADKVLVGKVKSNVFDFLVRMGQRLLEVKRLG-GDEGGDGDAVAFGTLAVGFGFSKKF 241

Query: 798  FQLGSSLDCVQGNRKVLFALQMDFVKLEKDLANSGAVISIPHVTNVDNEDEVPELIPITL 977
            ++LGS+ DC+QGNRKVLF L   F KLEKD A++   ISIP   N D EDE+P LIPI  
Sbjct: 242  YELGSAPDCLQGNRKVLFGLHEGFAKLEKDFASARIEISIPEDDNCD-EDELPTLIPIAQ 300

Query: 978  -EAEV---SDKEVEAANESANKPSKKIKKL 1055
             EAEV   S+      N SA K SKK KKL
Sbjct: 301  PEAEVEGASEVVESVGNGSARKASKKSKKL 330


>emb|CAN72961.1| hypothetical protein VITISV_016489 [Vitis vinifera]
          Length = 547

 Score =  316 bits (810), Expect = 5e-84
 Identities = 173/330 (52%), Positives = 216/330 (65%), Gaps = 4/330 (1%)
 Frame = +3

Query: 78   KHLASCNKTTRDKALHLLKTWLPSQTEVSDDEMKKIWKGLFYCVWHADKQQFQIELINRX 257
            +HLASC+K+TRD+AL LL TWLPSQ++VS+++MKK+WKGLFY +WHADK   Q +LI+R 
Sbjct: 7    RHLASCDKSTRDEALRLLHTWLPSQSQVSEEDMKKVWKGLFYSLWHADKTAVQSDLIDRL 66

Query: 258  XXXXXXXXXXXXIHYFEVFLLTIRREWSGIDYLRLDKFYXXXXXXXXXXXXXXKKNGWDS 437
                        IHYF VFLLT+RREW GID LRLDKFY              K N WD 
Sbjct: 67   ASLLTTLNLPLSIHYFSVFLLTMRREWPGIDALRLDKFYLLIRKFMYNFFLVLKNNSWDL 126

Query: 438  ELVSRFIGVLEEKTLLSGDNFPAHGVNYHLVEVFLEELKSFLPLKLETVEVLVNPFVSVL 617
            E+  R I VLE    L    F  +GV YH+  VFLEEL+ FLP++ E V VL  PFV V+
Sbjct: 127  EISKRLIVVLE----LEDGRFSGNGVGYHVASVFLEELRPFLPVRREIVSVLFEPFVEVM 182

Query: 618  GKSLDKVLLNKIKSSLFGCLLENGKKLLERKKVGDGAEEGGNEVELFGTMALTLGLSRKF 797
            G+S DKVL+ K+KS++F  L+  G++LLE K++G G E G  +   FGT+A+  G S+KF
Sbjct: 183  GRSADKVLVGKVKSNVFDFLVRMGQRLLEVKRLG-GDEGGDGDAVAFGTLAVGFGFSKKF 241

Query: 798  FQLGSSLDCVQGNRKVLFALQMDFVKLEKDLANSGAVISIPHVTNVDNEDEVPELIPITL 977
            ++LGS+ DC+QGNRKVLF L   F KLEKD A++   ISIP   N D EDE+P LIPI  
Sbjct: 242  YELGSAPDCLQGNRKVLFGLHEGFAKLEKDFASARIEISIPEDDNCD-EDELPTLIPIAQ 300

Query: 978  -EAEV---SDKEVEAANESANKPSKKIKKL 1055
             EAEV   S+      N SA K SKK KKL
Sbjct: 301  PEAEVEGASEVVESVGNGSARKASKKSKKL 330


>ref|XP_004150388.1| PREDICTED: uncharacterized protein LOC101212182 [Cucumis sativus]
            gi|449508226|ref|XP_004163255.1| PREDICTED:
            uncharacterized protein LOC101227674 [Cucumis sativus]
          Length = 566

 Score =  311 bits (796), Expect = 2e-82
 Identities = 170/334 (50%), Positives = 215/334 (64%), Gaps = 5/334 (1%)
 Frame = +3

Query: 66   SSLAKHLASCNKTTRDKALH-LLKTWLPSQTEVSDDEMKKIWKGLFYCVWHADKQQFQIE 242
            +SL K LAS NK TRDK L  ++KTWLP+QT +SD +MKK+WKGLFYCVWHADK   Q E
Sbjct: 12   TSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSE 71

Query: 243  LINRXXXXXXXXXXXXXIHYFEVFLLTIRREWSGIDYLRLDKFYXXXXXXXXXXXXXXKK 422
            LINR             + YF VFLLT+RREW+GID LRLDKFY              KK
Sbjct: 72   LINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKK 131

Query: 423  NGWDSELVSRFIGVLEEKTLLSGDNFPAHGVNYHLVEVFLEELKSFLPLKLETVEVLVNP 602
            + WD EL  R + VLEE+   + D F  +GVNY +  VFLEEL+ FLPL+ E V+VL  P
Sbjct: 132  HSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKP 191

Query: 603  FVSVLGKSLDKVLLNKIKSSLFGCLLENGKKLLERKKVGDGAEEGGNEVELFGTMALTLG 782
            F+  + K  DKVLL KIKS+LF  +L+ GK+LLE +K GD  +   + V ++GT++LT  
Sbjct: 192  FLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV-VYGTVSLTNQ 250

Query: 783  LSRKFFQLGSSLDCVQGNRKVLFALQMDFVKLEKDLANSGAVISIPHVTNVDNEDEVPEL 962
             S  F++LGSS DC QGNRKVLFA+  +F KLEKD  +SG  IS P +   D  DEVP L
Sbjct: 251  FSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQDG-DEVPTL 309

Query: 963  IPIT----LEAEVSDKEVEAANESANKPSKKIKK 1052
            +PI+      +E+S  +V+   ES +K  KK KK
Sbjct: 310  VPISSIEEAPSEISLVDVDVGTESTDKALKKQKK 343


>ref|XP_003543366.1| PREDICTED: ribosomal RNA processing protein 1 homolog [Glycine max]
          Length = 541

 Score =  300 bits (768), Expect = 4e-79
 Identities = 165/343 (48%), Positives = 215/343 (62%), Gaps = 14/343 (4%)
 Frame = +3

Query: 63   GSSLAKHLASCNKTTRDKALHLL-KTWLPSQTE-VSDDEMKKIWKGLFYCVWHADKQQFQ 236
            G SL K LA C KTTRDK+L LL K+WLPSQ++ +SDD+ KK+WKGLFYC+WH+DK   Q
Sbjct: 9    GRSLVKQLACCKKTTRDKSLRLLLKSWLPSQSQPLSDDDAKKLWKGLFYCMWHSDKPLVQ 68

Query: 237  IELINRXXXXXXXXXXXXXIHYFEVFLLTIRREWSGIDYLRLDKFYXXXXXXXXXXXXXX 416
             +L++R             + Y   FLLT+RREWSGID LRLDKFY              
Sbjct: 69   SDLVDRLSSLLLSLHLSVSLQYLSTFLLTMRREWSGIDALRLDKFYLLIRRFVSKLFSLM 128

Query: 417  KKNGWDSELVSRFIGVLEEKTLLSGDN-FPAHGVNYHLVEVFLEELKSFLPLKLETVEVL 593
            K N WD  LV R + V +E TL + DN    +GVNYH+  VFLEEL+ FLPLK + +EVL
Sbjct: 129  KTNSWDLLLVQRLMNVFDEGTLSAQDNKSHGNGVNYHIATVFLEELRPFLPLKQQVLEVL 188

Query: 594  VNPFVSVLGKSLDKVLLNKIKSSLFGCLLENGKKLLERKKVGDGAE-EGGNEVELFGTMA 770
            + PFVS +G+  DKVL+ KI+S +F  LL+ GK+LLE KK G   E +  +EV L GT+A
Sbjct: 189  LKPFVSAMGRVHDKVLVGKIRSGVFDLLLKMGKRLLEVKKSGVEVEVDSRDEVVLIGTVA 248

Query: 771  LTLGLSRKFFQLGSSLDCVQGNRKVLFALQMDFVKLEKDLANSGAVISIPHVTNVDNEDE 950
            L +G S + +++GSS +C+QGNRKVLFAL  +F+KLEK+  NSG    IP     + E+E
Sbjct: 249  LVMGFSGRLYEVGSSAECIQGNRKVLFALHSEFLKLEKESVNSGFEFVIPDFVVDEEEEE 308

Query: 951  VPELIPI----------TLEAEVSDKEVEAANESANKPSKKIK 1049
            VPEL+P+           L+    DK+V      + K  KK K
Sbjct: 309  VPELVPLGPAEVAGNGEVLKKCKKDKKVSVEGGKSKKKKKKKK 351


>ref|XP_002874005.1| hypothetical protein ARALYDRAFT_910101 [Arabidopsis lyrata subsp.
            lyrata] gi|297319842|gb|EFH50264.1| hypothetical protein
            ARALYDRAFT_910101 [Arabidopsis lyrata subsp. lyrata]
          Length = 535

 Score =  299 bits (765), Expect = 9e-79
 Identities = 153/331 (46%), Positives = 219/331 (66%), Gaps = 6/331 (1%)
 Frame = +3

Query: 69   SLAKHLASCNKTTRDKALH-LLKTWLPSQTEVSDDEMKKIWKGLFYCVWHADKQQFQIEL 245
            SL K LASC ++ RD++L  +L+TWLP QTE+SD++MKK+W+G+FYC+WHADK  +Q EL
Sbjct: 22   SLIKKLASCKQSIRDRSLRTVLRTWLPEQTEISDEDMKKLWQGIFYCIWHADKSLYQSEL 81

Query: 246  INRXXXXXXXXXXXXXIHYFEVFLLTIRREWSGIDYLRLDKFYXXXXXXXXXXXXXXKKN 425
            I+R             +HYF VFL T+RREWS ID LRLDKFY                N
Sbjct: 82   IDRLSSAIQSLPLSLSLHYFTVFLFTMRREWSRIDRLRLDKFYLLIRRFLHGFFSLLDSN 141

Query: 426  GWDSELVSRFIGVLEEKTLLSGDNFPAHGVNYHLVEVFLEELKSFLPLKLETVEVLVNPF 605
             WD E   R +GVL + T L+GD F  +GVNYH+   F+EEL+ FLPL+ E +E+L+ PF
Sbjct: 142  SWDLEFTRRLMGVLFDGTFLAGDKFQGNGVNYHIASTFVEELRPFLPLRKEVLELLLAPF 201

Query: 606  VSVLGKSLDKVLLNKIKSSLFGCLLENGKKLLERKKVGDGAEEGGNEVELFGTMALTLGL 785
            V++LG   DK+L+ KIKS+LF  LL+ GKKLL  KK G+      ++V + G++ALT+  
Sbjct: 202  VTILGVVTDKILVGKIKSNLFEELLKMGKKLLIIKKSGNDVVPEDDDVVVLGSIALTMEF 261

Query: 786  SRKFFQLGSSLDCVQGNRKVLFALQMDFVKLEKDLANSGAVISIPHVTNVDNEDEVPELI 965
            +++F+++GS+ +C QGNRK +FAL  +F++LEKD+++SG  +SI   +     DEVPEL+
Sbjct: 262  AKRFYEMGSTPECHQGNRKSIFALHKEFLQLEKDMSSSGIEVSIAEASR-PGSDEVPELV 320

Query: 966  PITLEAE-----VSDKEVEAANESANKPSKK 1043
            P++ E+E      S+K++ A   S+ K   K
Sbjct: 321  PVS-ESESNTGSKSNKKIVANGSSSKKKGLK 350


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