BLASTX nr result

ID: Cimicifuga21_contig00010599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010599
         (929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23199.1| unknown [Picea sitchensis] gi|224285611|gb|ACN405...   277   3e-72
ref|XP_004143603.1| PREDICTED: 50S ribosomal protein L10, chloro...   276   6e-72
ref|XP_004163071.1| PREDICTED: 50S ribosomal protein L10, chloro...   275   8e-72
ref|XP_003610379.1| 50S ribosomal protein L10 [Medicago truncatu...   275   1e-71
sp|O80362.1|RK10_TOBAC RecName: Full=50S ribosomal protein L10, ...   272   9e-71

>gb|ABK23199.1| unknown [Picea sitchensis] gi|224285611|gb|ACN40524.1| unknown
           [Picea sitchensis] gi|224285667|gb|ACN40549.1| unknown
           [Picea sitchensis]
          Length = 256

 Score =  277 bits (708), Expect = 3e-72
 Identities = 140/193 (72%), Positives = 153/193 (79%), Gaps = 2/193 (1%)
 Frame = +3

Query: 132 NPQYSTRR--RIPSIQAAISRXXXXXXXXXXXXHLENCYLVAGIKYKGLTVKQFQELRSS 305
           NPQ  +     +  IQ AISR             LENCYLVAGIKY GLTVKQ QELR S
Sbjct: 57  NPQNQSHGGGHLVRIQCAISRNKKEETVEKVKKQLENCYLVAGIKYTGLTVKQLQELRKS 116

Query: 306 LPDSVKLVVVKNTLVGKAIEGTQWEALKPCMKGMNAWMFVHTEEIPGALKPYRDFQKERK 485
           LP+S KLVV KN LVGKAIEGT WE LKPCMKGMNAWMFVH+EEIP ALKPYR+FQK++K
Sbjct: 117 LPESTKLVVAKNKLVGKAIEGTAWEVLKPCMKGMNAWMFVHSEEIPAALKPYRNFQKQQK 176

Query: 486 LEDNDFTGGVFEGKYYEPSEFKELESMPTKAEIYAKLLGSLQSPASALVSTLQAPARDLV 665
           LE+NDFTG VFEGK+Y P EFK LE+MPT+AEIYAK+LGSLQSPA  L+STLQAPARDLV
Sbjct: 177 LEENDFTGAVFEGKFYSPQEFKALETMPTRAEIYAKILGSLQSPAIGLISTLQAPARDLV 236

Query: 666 LVLKAYVQKLEEE 704
             LKAYVQKLEEE
Sbjct: 237 FTLKAYVQKLEEE 249


>ref|XP_004143603.1| PREDICTED: 50S ribosomal protein L10, chloroplastic-like [Cucumis
           sativus]
          Length = 235

 Score =  276 bits (705), Expect = 6e-72
 Identities = 136/202 (67%), Positives = 162/202 (80%), Gaps = 4/202 (1%)
 Frame = +3

Query: 123 TFRNPQYSTRR----RIPSIQAAISRXXXXXXXXXXXXHLENCYLVAGIKYKGLTVKQFQ 290
           +F  P++ST +    R   + AAISR             LE+CYL+AGIKYKG TVKQFQ
Sbjct: 32  SFSLPRHSTNQTRHYRGLKVSAAISRTKKEETVETVKQQLEDCYLLAGIKYKGFTVKQFQ 91

Query: 291 ELRSSLPDSVKLVVVKNTLVGKAIEGTQWEALKPCMKGMNAWMFVHTEEIPGALKPYRDF 470
           ELR SLP++ KL+V KNTLV KAIEGT WEALKPCMKGMN W+FVH+EEIP A+KPYRDF
Sbjct: 92  ELRRSLPETSKLIVAKNTLVLKAIEGTSWEALKPCMKGMNVWLFVHSEEIPAAIKPYRDF 151

Query: 471 QKERKLEDNDFTGGVFEGKYYEPSEFKELESMPTKAEIYAKLLGSLQSPASALVSTLQAP 650
           QKE+KLEDNDFTG VFEGKYY P EFK LE+MP++AE+YAK+LG LQ+PAS+LV T+QAP
Sbjct: 152 QKEKKLEDNDFTGAVFEGKYYGPDEFKALETMPSRAEVYAKMLGLLQAPASSLVGTIQAP 211

Query: 651 ARDLVLVLKAYVQKLEEEESGG 716
           AR+L++VLKAYVQKLEE+  GG
Sbjct: 212 ARELLMVLKAYVQKLEEQGGGG 233


>ref|XP_004163071.1| PREDICTED: 50S ribosomal protein L10, chloroplastic-like [Cucumis
           sativus]
          Length = 235

 Score =  275 bits (704), Expect = 8e-72
 Identities = 136/202 (67%), Positives = 162/202 (80%), Gaps = 4/202 (1%)
 Frame = +3

Query: 123 TFRNPQYSTRR----RIPSIQAAISRXXXXXXXXXXXXHLENCYLVAGIKYKGLTVKQFQ 290
           +F  P++ST +    R   + AAISR             LE+CYL+AGIKYKG TVKQFQ
Sbjct: 32  SFSLPRHSTNQTRHYRGLKVAAAISRTKKEETVETVKQQLEDCYLLAGIKYKGFTVKQFQ 91

Query: 291 ELRSSLPDSVKLVVVKNTLVGKAIEGTQWEALKPCMKGMNAWMFVHTEEIPGALKPYRDF 470
           ELR SLP++ KL+V KNTLV KAIEGT WEALKPCMKGMN W+FVH+EEIP A+KPYRDF
Sbjct: 92  ELRRSLPETSKLIVAKNTLVLKAIEGTSWEALKPCMKGMNVWLFVHSEEIPAAIKPYRDF 151

Query: 471 QKERKLEDNDFTGGVFEGKYYEPSEFKELESMPTKAEIYAKLLGSLQSPASALVSTLQAP 650
           QKE+KLEDNDFTG VFEGKYY P EFK LE+MP++AE+YAK+LG LQ+PAS+LV T+QAP
Sbjct: 152 QKEKKLEDNDFTGAVFEGKYYGPDEFKALETMPSRAEVYAKMLGLLQAPASSLVGTIQAP 211

Query: 651 ARDLVLVLKAYVQKLEEEESGG 716
           AR+L++VLKAYVQKLEE+  GG
Sbjct: 212 ARELLMVLKAYVQKLEEQGGGG 233


>ref|XP_003610379.1| 50S ribosomal protein L10 [Medicago truncatula]
           gi|217071998|gb|ACJ84359.1| unknown [Medicago
           truncatula] gi|355511434|gb|AES92576.1| 50S ribosomal
           protein L10 [Medicago truncatula]
           gi|388522083|gb|AFK49103.1| unknown [Medicago
           truncatula]
          Length = 234

 Score =  275 bits (702), Expect = 1e-71
 Identities = 132/200 (66%), Positives = 162/200 (81%)
 Frame = +3

Query: 114 PKTTFRNPQYSTRRRIPSIQAAISRXXXXXXXXXXXXHLENCYLVAGIKYKGLTVKQFQE 293
           P T++++   S   R+ SI AAISR             LENCYL+AGI YKG TVKQFQE
Sbjct: 32  PPTSYKHRPISKTHRL-SINAAISRTKKEETVETVKEQLENCYLLAGINYKGFTVKQFQE 90

Query: 294 LRSSLPDSVKLVVVKNTLVGKAIEGTQWEALKPCMKGMNAWMFVHTEEIPGALKPYRDFQ 473
           LR +LP++ KLVV KNTLV KA+EGTQWE LKPCM GMN W+FVHTEEIP A+KPYRDFQ
Sbjct: 91  LRKTLPETTKLVVAKNTLVYKALEGTQWETLKPCMTGMNVWLFVHTEEIPSAIKPYRDFQ 150

Query: 474 KERKLEDNDFTGGVFEGKYYEPSEFKELESMPTKAEIYAKLLGSLQSPASALVSTLQAPA 653
           KE+KLE+NDFTG VFEGK+Y P EFK+LE++PT+ EIYA LLGSL+SP+SALV+T+QAPA
Sbjct: 151 KEKKLEENDFTGAVFEGKFYGPDEFKKLETLPTRGEIYANLLGSLKSPSSALVTTIQAPA 210

Query: 654 RDLVLVLKAYVQKLEEEESG 713
           R+L++VLKA+++KLEE+E G
Sbjct: 211 RELIMVLKAHIKKLEEQEQG 230


>sp|O80362.1|RK10_TOBAC RecName: Full=50S ribosomal protein L10, chloroplastic; AltName:
           Full=CL10; Flags: Precursor gi|3298441|dbj|BAA31511.1|
           chloroplast ribosomal protein L10 [Nicotiana tabacum]
          Length = 227

 Score =  272 bits (695), Expect = 9e-71
 Identities = 136/204 (66%), Positives = 163/204 (79%)
 Frame = +3

Query: 93  FTKPLILPKTTFRNPQYSTRRRIPSIQAAISRXXXXXXXXXXXXHLENCYLVAGIKYKGL 272
           F   L LP     +P +  + +  +I++AISR             LE+CYL+AGI YKGL
Sbjct: 24  FNNSLTLPT----HPHFKPKSKNLTIRSAISRTKKEETVETVKQQLEDCYLLAGIGYKGL 79

Query: 273 TVKQFQELRSSLPDSVKLVVVKNTLVGKAIEGTQWEALKPCMKGMNAWMFVHTEEIPGAL 452
           TVKQFQELRS LPD+ KL+V KNTLV KAIEGT+WEALKPCMKGMNAW+FVH+EEIP AL
Sbjct: 80  TVKQFQELRSQLPDTTKLLVAKNTLVLKAIEGTKWEALKPCMKGMNAWLFVHSEEIPAAL 139

Query: 453 KPYRDFQKERKLEDNDFTGGVFEGKYYEPSEFKELESMPTKAEIYAKLLGSLQSPASALV 632
           KPYR FQKE+KLE+NDFTG VFEGK+Y P EFK LE++PT+AEIYA+LLGSL+ PASA+V
Sbjct: 140 KPYRTFQKEKKLEENDFTGAVFEGKFYGPEEFKALETLPTRAEIYAQLLGSLKGPASAVV 199

Query: 633 STLQAPARDLVLVLKAYVQKLEEE 704
            T+QAPAR+LV+VLKAYV+KLEEE
Sbjct: 200 GTIQAPARNLVMVLKAYVKKLEEE 223


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