BLASTX nr result

ID: Cimicifuga21_contig00010558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010558
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO61642.1| NAD-dependent isocitrate dehydrogenase alpha subu...   268   1e-69
ref|XP_002871023.1| hypothetical protein ARALYDRAFT_487101 [Arab...   267   1e-69
emb|CAB83285.1| 3-isopropylmalate dehydrogenase-like protein [Ar...   266   4e-69
ref|NP_568113.1| Isocitrate dehydrogenase [NAD] catalytic subuni...   266   4e-69
ref|XP_002281826.1| PREDICTED: isocitrate dehydrogenase [NAD] ca...   265   5e-69

>gb|AAO61642.1| NAD-dependent isocitrate dehydrogenase alpha subunit [Brassica
           napus] gi|28974494|gb|AAO61643.1| NAD-dependent
           isocitrate dehydrogenase alpha subunit [Brassica napus]
           gi|28974496|gb|AAO61644.1| NAD-dependent isocitrate
           dehydrogenase alpha subunit [Brassica napus]
          Length = 330

 Score =  268 bits (684), Expect = 1e-69
 Identities = 132/193 (68%), Positives = 157/193 (81%), Gaps = 1/193 (0%)
 Frame = -1

Query: 665 LITKR-SMGVAEYAFDYAKTHGRNRISAIHAANIVKGIDDIFVECCRDVAKKYPEVTYEE 489
           +IT++ S+ VAEYAF YAKTHGR R+SAIH ANI++  D +F++CCR+VA+KYPE+TYEE
Sbjct: 138 IITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEE 197

Query: 488 VSTEKCHTKLFRNPNTLDVLVMPNYHAFIIADFCENLFGDFGSTPSCNIGEGGIALVEAV 309
           V  + C   L +NP   DVLVMPN +  II+D C  L G  G TPSCNIGE G+AL EAV
Sbjct: 198 VVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEDGVALAEAV 257

Query: 308 HGSAPEIAGKDLANPAALLLSAVMMLRHLKLNDKADQIHNAIIKTIAEGKYRTADLGGSS 129
           HGSAP+IAGK+LANP ALLLS VMMLRHLKLN++A+QIH AII TIAEGKYRTADLGGSS
Sbjct: 258 HGSAPDIAGKNLANPTALLLSGVMMLRHLKLNEQAEQIHRAIINTIAEGKYRTADLGGSS 317

Query: 128 TTTAFTEAICRNL 90
           TTT FT+AIC +L
Sbjct: 318 TTTDFTKAICDHL 330


>ref|XP_002871023.1| hypothetical protein ARALYDRAFT_487101 [Arabidopsis lyrata subsp.
           lyrata] gi|297316860|gb|EFH47282.1| hypothetical protein
           ARALYDRAFT_487101 [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score =  267 bits (683), Expect = 1e-69
 Identities = 132/193 (68%), Positives = 158/193 (81%), Gaps = 1/193 (0%)
 Frame = -1

Query: 665 LITKR-SMGVAEYAFDYAKTHGRNRISAIHAANIVKGIDDIFVECCRDVAKKYPEVTYEE 489
           +IT++ S+ VAEYAF YAKTHGR R+SAIH ANI++  D +F++CCR+VA+KYPE+TYEE
Sbjct: 181 IITRQASLRVAEYAFLYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEE 240

Query: 488 VSTEKCHTKLFRNPNTLDVLVMPNYHAFIIADFCENLFGDFGSTPSCNIGEGGIALVEAV 309
           V  + C   L +NP   DVLVMPN +  II+D C  L G  G TPSCNIGE G+AL EAV
Sbjct: 241 VVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEDGVALAEAV 300

Query: 308 HGSAPEIAGKDLANPAALLLSAVMMLRHLKLNDKADQIHNAIIKTIAEGKYRTADLGGSS 129
           HGSAP+IAGK+LANP ALLLS VMMLRHLKLN++A+QIH+AII TIAEGKYRTADLGGSS
Sbjct: 301 HGSAPDIAGKNLANPTALLLSGVMMLRHLKLNEQAEQIHSAIINTIAEGKYRTADLGGSS 360

Query: 128 TTTAFTEAICRNL 90
           TTT FT+AIC +L
Sbjct: 361 TTTEFTKAICDHL 373


>emb|CAB83285.1| 3-isopropylmalate dehydrogenase-like protein [Arabidopsis thaliana]
           gi|9757780|dbj|BAB08389.1| 3-isopropylmalate
           dehydrogenase [Arabidopsis thaliana]
          Length = 372

 Score =  266 bits (679), Expect = 4e-69
 Identities = 131/193 (67%), Positives = 157/193 (81%), Gaps = 1/193 (0%)
 Frame = -1

Query: 665 LITKR-SMGVAEYAFDYAKTHGRNRISAIHAANIVKGIDDIFVECCRDVAKKYPEVTYEE 489
           +IT++ S+ VAEYAF YAKTHGR R+SAIH ANI++  D +F++CCR+VA+KYPE+TYEE
Sbjct: 180 IITRQASLRVAEYAFLYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEE 239

Query: 488 VSTEKCHTKLFRNPNTLDVLVMPNYHAFIIADFCENLFGDFGSTPSCNIGEGGIALVEAV 309
           V  + C   L +NP   DVLVMPN +  II+D C  L G  G TPSCNIGE G+AL EAV
Sbjct: 240 VVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEDGVALAEAV 299

Query: 308 HGSAPEIAGKDLANPAALLLSAVMMLRHLKLNDKADQIHNAIIKTIAEGKYRTADLGGSS 129
           HGSAP+IAGK+LANP ALLLS VMMLRHLK N++A+QIH+AII TIAEGKYRTADLGGSS
Sbjct: 300 HGSAPDIAGKNLANPTALLLSGVMMLRHLKFNEQAEQIHSAIINTIAEGKYRTADLGGSS 359

Query: 128 TTTAFTEAICRNL 90
           TTT FT+AIC +L
Sbjct: 360 TTTEFTKAICDHL 372


>ref|NP_568113.1| Isocitrate dehydrogenase [NAD] catalytic subunit 5 [Arabidopsis
           thaliana] gi|75249591|sp|Q945K7.1|IDH5_ARATH RecName:
           Full=Isocitrate dehydrogenase [NAD] catalytic subunit 5,
           mitochondrial; AltName: Full=IDH-V; AltName:
           Full=Isocitric dehydrogenase 5; AltName:
           Full=NAD(+)-specific ICDH 5; Flags: Precursor
           gi|15724320|gb|AAL06553.1|AF412100_1 W25EPL23M/W25EPL23M
           [Arabidopsis thaliana] gi|20466714|gb|AAM20674.1|
           putative protein [Arabidopsis thaliana]
           gi|30725594|gb|AAP37819.1| At5g03290 [Arabidopsis
           thaliana] gi|332003198|gb|AED90581.1| Isocitrate
           dehydrogenase [NAD] catalytic subunit 5 [Arabidopsis
           thaliana]
          Length = 374

 Score =  266 bits (679), Expect = 4e-69
 Identities = 131/193 (67%), Positives = 157/193 (81%), Gaps = 1/193 (0%)
 Frame = -1

Query: 665 LITKR-SMGVAEYAFDYAKTHGRNRISAIHAANIVKGIDDIFVECCRDVAKKYPEVTYEE 489
           +IT++ S+ VAEYAF YAKTHGR R+SAIH ANI++  D +F++CCR+VA+KYPE+TYEE
Sbjct: 182 IITRQASLRVAEYAFLYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEE 241

Query: 488 VSTEKCHTKLFRNPNTLDVLVMPNYHAFIIADFCENLFGDFGSTPSCNIGEGGIALVEAV 309
           V  + C   L +NP   DVLVMPN +  II+D C  L G  G TPSCNIGE G+AL EAV
Sbjct: 242 VVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEDGVALAEAV 301

Query: 308 HGSAPEIAGKDLANPAALLLSAVMMLRHLKLNDKADQIHNAIIKTIAEGKYRTADLGGSS 129
           HGSAP+IAGK+LANP ALLLS VMMLRHLK N++A+QIH+AII TIAEGKYRTADLGGSS
Sbjct: 302 HGSAPDIAGKNLANPTALLLSGVMMLRHLKFNEQAEQIHSAIINTIAEGKYRTADLGGSS 361

Query: 128 TTTAFTEAICRNL 90
           TTT FT+AIC +L
Sbjct: 362 TTTEFTKAICDHL 374


>ref|XP_002281826.1| PREDICTED: isocitrate dehydrogenase [NAD] catalytic subunit 5,
           mitochondrial-like [Vitis vinifera]
          Length = 367

 Score =  265 bits (678), Expect = 5e-69
 Identities = 130/193 (67%), Positives = 157/193 (81%), Gaps = 1/193 (0%)
 Frame = -1

Query: 665 LITKR-SMGVAEYAFDYAKTHGRNRISAIHAANIVKGIDDIFVECCRDVAKKYPEVTYEE 489
           +IT++ S+ VAEYAF YAKTHGR R+SAIH ANI++  D +F++CCR+VA+KYPE+ YEE
Sbjct: 175 IITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIKYEE 234

Query: 488 VSTEKCHTKLFRNPNTLDVLVMPNYHAFIIADFCENLFGDFGSTPSCNIGEGGIALVEAV 309
           V  + C   L +NP   DVLVMPN +  II+D C  L G  G TPSCNIGEGGIAL EAV
Sbjct: 235 VVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAV 294

Query: 308 HGSAPEIAGKDLANPAALLLSAVMMLRHLKLNDKADQIHNAIIKTIAEGKYRTADLGGSS 129
           HGSAP+IAGK++ANP AL+LSAV MLRHLKL+DKADQI NAI+ TI+EG+YRTADLGGSS
Sbjct: 295 HGSAPDIAGKNMANPTALMLSAVTMLRHLKLHDKADQIQNAILNTISEGRYRTADLGGSS 354

Query: 128 TTTAFTEAICRNL 90
           TTT FT+AIC +L
Sbjct: 355 TTTDFTKAICDHL 367


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