BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010537
         (1586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative ...   309   2e-81
ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal doma...   287   6e-75
ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal doma...   284   5e-74
ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal doma...   280   8e-73
dbj|BAJ87495.1| predicted protein [Hordeum vulgare subsp. vulgare]    271   4e-70

>ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
            gi|223534449|gb|EEF36151.1| RNA polymerase II ctd
            phosphatase, putative [Ricinus communis]
          Length = 478

 Score =  309 bits (791), Expect = 2e-81
 Identities = 164/330 (49%), Positives = 221/330 (66%), Gaps = 16/330 (4%)
 Frame = +1

Query: 643  MSLTTDSPVNXXXXXXX--FAALIDAELGAISSSGXXXXXXXNLSXXXXXXXXXXXXXIQ 816
            MSL TDSP++         FAAL+DAEL + SSS                         +
Sbjct: 1    MSLVTDSPLHSSHSSSSDDFAALLDAELDSKSSSSDSSPKAIKHDDASDANDDVNEEEEE 60

Query: 817  S--------------LKRRKVDALEDRQELKVSTSLVAIQQESDASADKVKCRLEGHPAF 954
                           +KR +V+ LE+ +  K ST  V++ Q   AS+ KV C    HP  
Sbjct: 61   EESDSDDDSDIATNRIKRSRVETLENGENPKESTR-VSLDQTLVASSSKVACT---HPGS 116

Query: 955  IKEMCVRCGQYVTDESAVAFGYIHKDLKIGNEEMARLRGSNLKDLLRSKKXXXXXXXXXX 1134
              +MC+ CG+ + +E+ V FGYIHK L++ N+E+ RLR +++K+LLR +K          
Sbjct: 117  FGDMCILCGERLIEETGVTFGYIHKGLRLANDEIVRLRNTDMKNLLRHRKLYLVLDLDHT 176

Query: 1135 XXNSTRLINISAEEEYLKAEVDSLQDISNGSLFKLDTMHMMTKLRPFVRTFLKEASSMYE 1314
              NST+L++++AEEEYLK+++DS+QD+SNGSLF +D MHMMTKLRPF+RTFLKEAS M+E
Sbjct: 177  LLNSTQLMHLTAEEEYLKSQIDSMQDVSNGSLFMVDFMHMMTKLRPFIRTFLKEASQMFE 236

Query: 1315 MYIYTMGERPYALQMAQLLDPERVYFNSKVVSQADCTQKHQKGLDVVLGADSAVVILDDT 1494
            MYIYTMG+R YAL+MA+ LDP R YFN++V+S+ D TQ+HQKGLD+VLG +SAV+ILDDT
Sbjct: 237  MYIYTMGDRAYALEMAKFLDPGREYFNARVISRDDGTQRHQKGLDIVLGQESAVLILDDT 296

Query: 1495 EFVWSKHKENLVLMERYHFFASSGREFGFK 1584
            E  W+KHK+NL+LMERYHFFASS R+FGF+
Sbjct: 297  ENAWTKHKDNLILMERYHFFASSCRQFGFE 326


>ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            4-like [Glycine max]
          Length = 442

 Score =  287 bits (734), Expect = 6e-75
 Identities = 160/315 (50%), Positives = 207/315 (65%), Gaps = 2/315 (0%)
 Frame = +1

Query: 643  MSLTTDSPVNXXXXXXXFAALIDAELGAISSSGXXXXXXXNLSXXXXXXXXXXXXXIQSL 822
            MS+ TDSPV+       F A +DAEL A S                          +QS+
Sbjct: 1    MSVVTDSPVHSSSSDD-FIAFLDAELDASSPDSSPDKEVVKQDDE-----------LQSV 48

Query: 823  --KRRKVDALEDRQELKVSTSLVAIQQESDASADKVKCRLEGHPAFIKEMCVRCGQYVTD 996
              KRRK +++E   E + STS   +++  +AS++   C    HP     MC+RCGQ +  
Sbjct: 49   RTKRRKFESIE---ETEGSTSEGIVKRSLEASSEVDVCCT--HPGSFGNMCIRCGQKLDG 103

Query: 997  ESAVAFGYIHKDLKIGNEEMARLRGSNLKDLLRSKKXXXXXXXXXXXXNSTRLINISAEE 1176
            ES V FGYIHK L++ +EE++RLR +++K LL  KK            NST L  +++EE
Sbjct: 104  ESGVTFGYIHKGLRLHDEEISRLRNTDMKSLLGRKKLYLVLDLDHTLLNSTHLAQLTSEE 163

Query: 1177 EYLKAEVDSLQDISNGSLFKLDTMHMMTKLRPFVRTFLKEASSMYEMYIYTMGERPYALQ 1356
             +L  + DSL ++S GSLFKL+ M+MMTKLRPFVR FLKEAS M+EMYIYTMG+RPYAL+
Sbjct: 164  LHLLNQTDSLTNVSKGSLFKLEHMNMMTKLRPFVRPFLKEASEMFEMYIYTMGDRPYALE 223

Query: 1357 MAQLLDPERVYFNSKVVSQADCTQKHQKGLDVVLGADSAVVILDDTEFVWSKHKENLVLM 1536
            MA+LLDP+  YFN+KV+S+ D TQKHQKGLDVVLG +SAV+ILDDTE  W KHK+NL+LM
Sbjct: 224  MAKLLDPQGEYFNAKVISRDDGTQKHQKGLDVVLGQESAVIILDDTEHAWMKHKDNLILM 283

Query: 1537 ERYHFFASSGREFGF 1581
            ERYHFF SS R+FGF
Sbjct: 284  ERYHFFGSSCRQFGF 298


>ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            4-like [Glycine max]
          Length = 428

 Score =  284 bits (726), Expect = 5e-74
 Identities = 156/313 (49%), Positives = 199/313 (63%)
 Frame = +1

Query: 643  MSLTTDSPVNXXXXXXXFAALIDAELGAISSSGXXXXXXXNLSXXXXXXXXXXXXXIQSL 822
            MS+ TDSPV+       F A +DAEL A S            S                +
Sbjct: 1    MSVVTDSPVHSSSSDD-FIAFLDAELDASSPDS---------SPDKEVEKQDDDELESGI 50

Query: 823  KRRKVDALEDRQELKVSTSLVAIQQESDASADKVKCRLEGHPAFIKEMCVRCGQYVTDES 1002
            KRRK +++E                E++ S  +  C    HP     MC+RCGQ +  ES
Sbjct: 51   KRRKFESIE----------------ETEGSTSEGVCT---HPGSFGNMCIRCGQKLDGES 91

Query: 1003 AVAFGYIHKDLKIGNEEMARLRGSNLKDLLRSKKXXXXXXXXXXXXNSTRLINISAEEEY 1182
             V FGYIHK L++ +EE++RLR +++K LL  KK            NST L ++++EE +
Sbjct: 92   GVTFGYIHKGLRLHDEEISRLRNTDMKSLLCRKKLYLVLDLDHTLLNSTHLAHLTSEESH 151

Query: 1183 LKAEVDSLQDISNGSLFKLDTMHMMTKLRPFVRTFLKEASSMYEMYIYTMGERPYALQMA 1362
            L  + DSL+D+S GSLFKL+ M+MMTKLRPFVR FLKEAS M+EMYIYTMG+RPYAL+MA
Sbjct: 152  LLNQTDSLRDVSKGSLFKLEHMNMMTKLRPFVRPFLKEASEMFEMYIYTMGDRPYALEMA 211

Query: 1363 QLLDPERVYFNSKVVSQADCTQKHQKGLDVVLGADSAVVILDDTEFVWSKHKENLVLMER 1542
            +LLDP+  YFN+KV+S+ D TQKHQKGLDVVLG +SAV+ILDDTE  W KHK+NL+LMER
Sbjct: 212  KLLDPQGEYFNAKVISRDDGTQKHQKGLDVVLGQESAVLILDDTEHAWMKHKDNLILMER 271

Query: 1543 YHFFASSGREFGF 1581
            YHFF SS R+FGF
Sbjct: 272  YHFFGSSCRQFGF 284


>ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            4-like [Cucumis sativus]
          Length = 452

 Score =  280 bits (716), Expect = 8e-73
 Identities = 154/315 (48%), Positives = 204/315 (64%), Gaps = 2/315 (0%)
 Frame = +1

Query: 643  MSLTTDSPVNXXXXXXXFAALIDAELGAISSSGXXXXXXXNLSXXXXXXXXXXXXXIQSL 822
            MSL T+SP +       FAA +  +L + SS           S                +
Sbjct: 1    MSLATNSPAHSSSSDD-FAAFLAVDLDSHSSD----------SSPDEETEGDNNAESVRI 49

Query: 823  KRRKVDALEDRQELKVSTSLVAIQQESDASADKV--KCRLEGHPAFIKEMCVRCGQYVTD 996
            KRRKV+ LE+ +E         I  E +  + +V  K +L  HP     MC+ CGQ + +
Sbjct: 50   KRRKVEKLENSEE--------DIMHEVEEQSLEVLSKQQLCSHPGSFGNMCIICGQRLDE 101

Query: 997  ESAVAFGYIHKDLKIGNEEMARLRGSNLKDLLRSKKXXXXXXXXXXXXNSTRLINISAEE 1176
            ES V FGYIHK+L++ N+E+ R+R   +K+LL+ KK            NST L  ++ EE
Sbjct: 102  ESGVTFGYIHKELRLNNDEINRMRNKEMKELLQRKKLILVLDLDHTLLNSTELRYLTVEE 161

Query: 1177 EYLKAEVDSLQDISNGSLFKLDTMHMMTKLRPFVRTFLKEASSMYEMYIYTMGERPYALQ 1356
            EYL+++ DSL D++ GSLF L+++H MTKLRPFV +FLKEAS ++EMYIYTMGER YA +
Sbjct: 162  EYLRSQTDSLDDVTKGSLFLLNSVHTMTKLRPFVHSFLKEASKLFEMYIYTMGERRYAFE 221

Query: 1357 MAQLLDPERVYFNSKVVSQADCTQKHQKGLDVVLGADSAVVILDDTEFVWSKHKENLVLM 1536
            MA+LLDP++ YF+SKV+S+ D TQKHQKGLDVVLG +SAV+ILDDTE  W+KHKENL+LM
Sbjct: 222  MAKLLDPKKEYFSSKVISRDDGTQKHQKGLDVVLGKESAVLILDDTENAWTKHKENLILM 281

Query: 1537 ERYHFFASSGREFGF 1581
            ERYHFFASS R+FGF
Sbjct: 282  ERYHFFASSCRQFGF 296


>dbj|BAJ87495.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 384

 Score =  271 bits (693), Expect = 4e-70
 Identities = 155/327 (47%), Positives = 199/327 (60%), Gaps = 14/327 (4%)
 Frame = +1

Query: 643  MSLTTDSPV---NXXXXXXXFAALIDAELGAISSSGXXXXXXXNLSXXXXXXXXXXXXXI 813
            MSL  +SP    +       FAAL+DAEL   S+         + S             +
Sbjct: 1    MSLAAESPSPSPSSSSGSEDFAALLDAELDLASAVDSASAGDPSTSPTSSDDEEDDDEDV 60

Query: 814  ---------QSLKRRKVDALEDRQELKVSTSLVAIQQESDASADKVKCRLEGHPAFIKEM 966
                      S KRRKV      +E        +I    DA   ++K     HP F   +
Sbjct: 61   VSDVETVEQSSAKRRKVKVQHQDRETTTRPDEDSIGSFKDA---QIKI-CPPHPGFFGGL 116

Query: 967  CVRCGQYVTDESA--VAFGYIHKDLKIGNEEMARLRGSNLKDLLRSKKXXXXXXXXXXXX 1140
            C RCG+   +E    VAFGY+HK L++G  E+ RLRGS+LK+LLR +K            
Sbjct: 117  CFRCGKRQDEEDVPGVAFGYVHKGLRLGTSEIDRLRGSDLKNLLRERKLILILDLDHTLI 176

Query: 1141 NSTRLINISAEEEYLKAEVDSLQDISNGSLFKLDTMHMMTKLRPFVRTFLKEASSMYEMY 1320
            NST+L +ISA E  L  +  + +D  NGSLF L+ M M+TKLRPFVR FLKEAS+M+EMY
Sbjct: 177  NSTKLHDISAAENNLGIQAAASKDDPNGSLFTLEGMQMLTKLRPFVRKFLKEASNMFEMY 236

Query: 1321 IYTMGERPYALQMAQLLDPERVYFNSKVVSQADCTQKHQKGLDVVLGADSAVVILDDTEF 1500
            IYTMG++ YA+++A+LLDP  VYFNSKV+S +DCTQ+HQKGLD+VLGA+S  VILDDTE+
Sbjct: 237  IYTMGDKAYAIEIAKLLDPRNVYFNSKVISNSDCTQRHQKGLDMVLGAESVAVILDDTEY 296

Query: 1501 VWSKHKENLVLMERYHFFASSGREFGF 1581
            VW KHKENL+LMERYH+FASS R+FGF
Sbjct: 297  VWQKHKENLILMERYHYFASSCRQFGF 323