BLASTX nr result

ID: Cimicifuga21_contig00010460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010460
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO34911.1| hypothetical protein [Amblyomma maculatum]             203   3e-50
gb|ACH63218.1| ribosomal protein L36 [Rheum australe]                 197   1e-48
emb|CBI40362.3| unnamed protein product [Vitis vinifera]              196   4e-48
ref|XP_002268801.1| PREDICTED: 60S ribosomal protein L36-3 isofo...   195   7e-48
ref|XP_003563645.1| PREDICTED: 60S ribosomal protein L36-3-like ...   194   1e-47

>gb|AEO34911.1| hypothetical protein [Amblyomma maculatum]
          Length = 110

 Score =  203 bits (517), Expect = 3e-50
 Identities = 102/110 (92%), Positives = 107/110 (97%)
 Frame = +2

Query: 116 MAPPQPKSGLFVGLNRGHIVTKRELALRPSSRKGKTSKRVHFVRNLIREVAGFAPYEKRI 295
           MAPPQP SGL VGLN+GHIVTKRELA RPSSRKGKTSKR+HFV+NLIREVAGFAPYEKRI
Sbjct: 1   MAPPQPNSGLAVGLNKGHIVTKRELAPRPSSRKGKTSKRIHFVKNLIREVAGFAPYEKRI 60

Query: 296 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSAGVTEKKK 445
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEM+NVLRKMRSAGVT+KKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMANVLRKMRSAGVTDKKK 110


>gb|ACH63218.1| ribosomal protein L36 [Rheum australe]
          Length = 110

 Score =  197 bits (502), Expect = 1e-48
 Identities = 100/110 (90%), Positives = 103/110 (93%)
 Frame = +2

Query: 116 MAPPQPKSGLFVGLNRGHIVTKRELALRPSSRKGKTSKRVHFVRNLIREVAGFAPYEKRI 295
           MAP QP SGLFVGLN+GHIVTK+EL  +PS RKGKTSKRVHFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPSSGLFVGLNKGHIVTKKELPAKPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 296 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSAGVTEKKK 445
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSAG  EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSAGGAEKKK 110


>emb|CBI40362.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  196 bits (498), Expect = 4e-48
 Identities = 98/112 (87%), Positives = 104/112 (92%)
 Frame = +2

Query: 110 QAMAPPQPKSGLFVGLNRGHIVTKRELALRPSSRKGKTSKRVHFVRNLIREVAGFAPYEK 289
           Q MAP QP +GLFVGLN+GH+VTK+EL  RPS RKGKTSKRVHFVRN+IREVAGFAPYEK
Sbjct: 34  QVMAPKQPNTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNIIREVAGFAPYEK 93

Query: 290 RITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSAGVTEKKK 445
           RITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKMRS GV EKKK
Sbjct: 94  RITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSGGVGEKKK 145


>ref|XP_002268801.1| PREDICTED: 60S ribosomal protein L36-3 isoform 2 [Vitis vinifera]
           gi|225464489|ref|XP_002268754.1| PREDICTED: 60S
           ribosomal protein L36-3 isoform 1 [Vitis vinifera]
           gi|302143845|emb|CBI22706.3| unnamed protein product
           [Vitis vinifera]
          Length = 110

 Score =  195 bits (496), Expect = 7e-48
 Identities = 99/110 (90%), Positives = 103/110 (93%)
 Frame = +2

Query: 116 MAPPQPKSGLFVGLNRGHIVTKRELALRPSSRKGKTSKRVHFVRNLIREVAGFAPYEKRI 295
           MAP QP +GLFVGLN+GHIVTK+EL  RPS RKGKTSKRVHFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 296 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSAGVTEKKK 445
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKMRS GV EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSGGVGEKKK 110


>ref|XP_003563645.1| PREDICTED: 60S ribosomal protein L36-3-like [Brachypodium
           distachyon]
          Length = 110

 Score =  194 bits (494), Expect = 1e-47
 Identities = 97/110 (88%), Positives = 103/110 (93%)
 Frame = +2

Query: 116 MAPPQPKSGLFVGLNRGHIVTKRELALRPSSRKGKTSKRVHFVRNLIREVAGFAPYEKRI 295
           MAP  PK+GLFVG+N+GH+VTKREL  RPS RKGK +KRVHFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPATPKTGLFVGINKGHVVTKRELPPRPSDRKGKITKRVHFVRNLIREVAGFAPYEKRI 60

Query: 296 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSAGVTEKKK 445
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSAGV +KKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSAGVADKKK 110


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