BLASTX nr result

ID: Cimicifuga21_contig00010443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010443
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-contain...   353   2e-95
emb|CAN76269.1| hypothetical protein VITISV_004097 [Vitis vinifera]   352   5e-95
ref|XP_002321562.1| predicted protein [Populus trichocarpa] gi|2...   339   5e-91
ref|XP_003517744.1| PREDICTED: uncharacterized WD repeat-contain...   338   1e-90
ref|XP_002280390.1| PREDICTED: uncharacterized WD repeat-contain...   335   9e-90

>ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Vitis vinifera]
          Length = 427

 Score =  353 bits (907), Expect = 2e-95
 Identities = 175/257 (68%), Positives = 203/257 (78%), Gaps = 2/257 (0%)
 Frame = +3

Query: 3   FSAHQDNKIRVWGTEKYS-NREYMQLATLPTLTDQVMNWIPTKNYVQVRRNKKCTWVHHV 179
           FSAHQD KIRVW  +  S +++Y  +ATLPTL+D+ +      NYVQVRR+KKCTWVHHV
Sbjct: 143 FSAHQDQKIRVWKVDNDSPHQKYKCMATLPTLSDRALKLFSASNYVQVRRHKKCTWVHHV 202

Query: 180 DAVSTLILSRDESLLYSASWDGTFKIWKTSNYRCLESIGNAHDDAINAIALSNNGFVYTA 359
           D +S L LS D SLLYSASWD TFKIWKT+++RCLES   AHDDAINA+ LS +G VYT 
Sbjct: 203 DTISALALSEDGSLLYSASWDRTFKIWKTTDFRCLESAEKAHDDAINALVLSTDGIVYTG 262

Query: 360 SADKTIKVWKKDPGAKKHSLVDTLEKHQSGVNALALRSNGATLYSGACDRSIVVWEKEDX 539
           SAD+ IKVWKK  G KKH LV TLEKH+S VNALAL  +G+ LYSGACDRSI+VWEK+  
Sbjct: 263 SADRKIKVWKKHEGEKKHRLVATLEKHKSAVNALALSPDGSVLYSGACDRSIIVWEKDTS 322

Query: 540 XXXXXXXKHMVVAGALRGHTKAILCLAIISDLVCSGSADNTVRIWRRGVGRSYSCLAVLE 719
                   HMVVAGALRGHTKAILCLAI+SDLV SGSAD TVRIW++G+ RSYSCLAV E
Sbjct: 323 SSGG----HMVVAGALRGHTKAILCLAIVSDLVFSGSADKTVRIWKKGLQRSYSCLAVFE 378

Query: 720 GHKGPVKCLT-GIENYN 767
           GH+GPVKCLT  ++NYN
Sbjct: 379 GHRGPVKCLTAAVDNYN 395



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
 Frame = +3

Query: 3   FSAHQDNKIRVWGTEKYSNREYMQLA------TLPTLTDQVMNWIPTKNYVQVRRNKK-- 158
           +SA  D   ++W T  +   E  + A       L   TD ++        ++V +  +  
Sbjct: 218 YSASWDRTFKIWKTTDFRCLESAEKAHDDAINALVLSTDGIVYTGSADRKIKVWKKHEGE 277

Query: 159 ------CTWVHHVDAVSTLILSRDESLLYSASWDGTFKIWK-----TSNYRCLESIGNAH 305
                  T   H  AV+ L LS D S+LYS + D +  +W+     +  +  +      H
Sbjct: 278 KKHRLVATLEKHKSAVNALALSPDGSVLYSGACDRSIIVWEKDTSSSGGHMVVAGALRGH 337

Query: 306 DDAINAIALSNNGFVYTASADKTIKVWKKDPGAKKHSLVDTLEKHQSGVNALAL------ 467
             AI  +A+ ++  V++ SADKT+++WKK    + +S +   E H+  V  L        
Sbjct: 338 TKAILCLAIVSD-LVFSGSADKTVRIWKKGL-QRSYSCLAVFEGHRGPVKCLTAAVDNYN 395

Query: 468 -RSNGAT-----LYSGACDRSIVVWE 527
            RSN        +YSG+ D  I VW+
Sbjct: 396 GRSNSDDDAAYLIYSGSLDCEIKVWQ 421


>emb|CAN76269.1| hypothetical protein VITISV_004097 [Vitis vinifera]
          Length = 507

 Score =  352 bits (903), Expect = 5e-95
 Identities = 173/257 (67%), Positives = 202/257 (78%), Gaps = 2/257 (0%)
 Frame = +3

Query: 3   FSAHQDNKIRVWGTEK-YSNREYMQLATLPTLTDQVMNWIPTKNYVQVRRNKKCTWVHHV 179
           FSAHQD KIRVW  +    +++Y  +ATLPTL+D+ +      NYVQVRR+KKCTWVHHV
Sbjct: 223 FSAHQDQKIRVWKVDNDXPHQKYKCMATLPTLSDRALKLFSASNYVQVRRHKKCTWVHHV 282

Query: 180 DAVSTLILSRDESLLYSASWDGTFKIWKTSNYRCLESIGNAHDDAINAIALSNNGFVYTA 359
           D +S L LS D SLLYSASWD TFKIWKT+++RCLES   AHDDAINA+ LS +G VYT 
Sbjct: 283 DTISALALSEDGSLLYSASWDRTFKIWKTTDFRCLESAEKAHDDAINALVLSTDGIVYTG 342

Query: 360 SADKTIKVWKKDPGAKKHSLVDTLEKHQSGVNALALRSNGATLYSGACDRSIVVWEKEDX 539
           SAD+ IKVWKK  G KKH LV TLEKH+S VNALAL  +G+ LYSGACDRSI+VWEK+  
Sbjct: 343 SADRKIKVWKKHEGEKKHRLVATLEKHKSAVNALALSPDGSVLYSGACDRSIIVWEKDTS 402

Query: 540 XXXXXXXKHMVVAGALRGHTKAILCLAIISDLVCSGSADNTVRIWRRGVGRSYSCLAVLE 719
                   HMVVAGALRGHTKAILCLA++SDLV SGSAD TVRIW++G+ RSYSCLAV E
Sbjct: 403 SSGG----HMVVAGALRGHTKAILCLAVVSDLVFSGSADKTVRIWKKGLQRSYSCLAVFE 458

Query: 720 GHKGPVKCLT-GIENYN 767
           GH+GPVKCLT  ++NYN
Sbjct: 459 GHRGPVKCLTAAVDNYN 475



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
 Frame = +3

Query: 3   FSAHQDNKIRVWGTEKYSNREYMQLA------TLPTLTDQVMNWIPTKNYVQVRRNKK-- 158
           +SA  D   ++W T  +   E  + A       L   TD ++        ++V +  +  
Sbjct: 298 YSASWDRTFKIWKTTDFRCLESAEKAHDDAINALVLSTDGIVYTGSADRKIKVWKKHEGE 357

Query: 159 ------CTWVHHVDAVSTLILSRDESLLYSASWDGTFKIWK-----TSNYRCLESIGNAH 305
                  T   H  AV+ L LS D S+LYS + D +  +W+     +  +  +      H
Sbjct: 358 KKHRLVATLEKHKSAVNALALSPDGSVLYSGACDRSIIVWEKDTSSSGGHMVVAGALRGH 417

Query: 306 DDAINAIALSNNGFVYTASADKTIKVWKKDPGAKKHSLVDTLEKHQSGVNALAL------ 467
             AI  +A+ ++  V++ SADKT+++WKK    + +S +   E H+  V  L        
Sbjct: 418 TKAILCLAVVSD-LVFSGSADKTVRIWKKGL-QRSYSCLAVFEGHRGPVKCLTAAVDNYN 475

Query: 468 -RSNGAT-----LYSGACDRSIVVWE 527
            RSN        +YSG+ D  I VW+
Sbjct: 476 GRSNSDDDAAYLIYSGSLDCEIKVWQ 501


>ref|XP_002321562.1| predicted protein [Populus trichocarpa] gi|222868558|gb|EEF05689.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score =  339 bits (869), Expect = 5e-91
 Identities = 168/251 (66%), Positives = 199/251 (79%), Gaps = 2/251 (0%)
 Frame = +3

Query: 3   FSAHQDNKIRVW--GTEKYSNREYMQLATLPTLTDQVMNWIPTKNYVQVRRNKKCTWVHH 176
           FSAHQDNKIRVW    ++ + ++Y +LATLPTL D+    +  +N VQ+RR+K CTWVHH
Sbjct: 72  FSAHQDNKIRVWKANNQETNQQKYTRLATLPTLGDRAFKSLLPRNQVQIRRHKTCTWVHH 131

Query: 177 VDAVSTLILSRDESLLYSASWDGTFKIWKTSNYRCLESIGNAHDDAINAIALSNNGFVYT 356
           VD VS L LS DES LYS SWD T KIW+T++++CLES+ NAHDDAINA+ALSN+G VYT
Sbjct: 132 VDTVSALALSSDESHLYSVSWDRTIKIWRTNDFKCLESVANAHDDAINAVALSNDGNVYT 191

Query: 357 ASADKTIKVWKKDPGAKKHSLVDTLEKHQSGVNALALRSNGATLYSGACDRSIVVWEKED 536
            SADK IKVW+K     KHSLV TLEKH SG+NALAL ++G+ LYSGACDRSIVVWEK+D
Sbjct: 192 GSADKKIKVWRKSSEENKHSLVATLEKHMSGINALALSTDGSVLYSGACDRSIVVWEKDD 251

Query: 537 XXXXXXXXKHMVVAGALRGHTKAILCLAIISDLVCSGSADNTVRIWRRGVGRSYSCLAVL 716
                    +MVV GALRGHT++ILCLA++SDLV SGSAD T+RIW RGV RSYSCLAVL
Sbjct: 252 DG-------NMVVLGALRGHTQSILCLAVVSDLVFSGSADKTIRIW-RGVDRSYSCLAVL 303

Query: 717 EGHKGPVKCLT 749
           EGH GPVKCLT
Sbjct: 304 EGHGGPVKCLT 314


>ref|XP_003517744.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Glycine max]
          Length = 433

 Score =  338 bits (866), Expect = 1e-90
 Identities = 165/256 (64%), Positives = 199/256 (77%), Gaps = 8/256 (3%)
 Frame = +3

Query: 3   FSAHQDNKIRVW-------GTEKYSNREYMQ-LATLPTLTDQVMNWIPTKNYVQVRRNKK 158
           F+AHQD+KIRVW       G    +N  Y + +ATLPTL D++     +KNYV++RR+KK
Sbjct: 138 FTAHQDHKIRVWKTTTDQPGNNNNNNPNYYKCVATLPTLHDRISKLFSSKNYVEIRRHKK 197

Query: 159 CTWVHHVDAVSTLILSRDESLLYSASWDGTFKIWKTSNYRCLESIGNAHDDAINAIALSN 338
            TWVHHVD VS L LSRD SLLYSASWD TFKIW+TS+++CLES+ NAH+DAIN++ LSN
Sbjct: 198 RTWVHHVDTVSALALSRDGSLLYSASWDRTFKIWRTSDFKCLESVKNAHEDAINSLVLSN 257

Query: 339 NGFVYTASADKTIKVWKKDPGAKKHSLVDTLEKHQSGVNALALRSNGATLYSGACDRSIV 518
           NGFVYT SAD  IK+WKK  G KKHSL+ TLEKH+S VNALAL S+G+ LYSGACDRSI+
Sbjct: 258 NGFVYTGSADTRIKMWKKLEGEKKHSLIGTLEKHKSAVNALALNSDGSVLYSGACDRSIL 317

Query: 519 VWEKEDXXXXXXXXKHMVVAGALRGHTKAILCLAIISDLVCSGSADNTVRIWRRGVGRSY 698
           VWE +           MV+ GALRGHTKAILCL +++DLVCSGSADN+VR+WRRG  +SY
Sbjct: 318 VWESDQ----NENNNTMVLVGALRGHTKAILCLVVVADLVCSGSADNSVRVWRRGAEKSY 373

Query: 699 SCLAVLEGHKGPVKCL 746
           SCLAV EGH+ PVKCL
Sbjct: 374 SCLAVFEGHRRPVKCL 389


>ref|XP_002280390.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Vitis vinifera]
          Length = 409

 Score =  335 bits (858), Expect = 9e-90
 Identities = 168/271 (61%), Positives = 209/271 (77%), Gaps = 3/271 (1%)
 Frame = +3

Query: 3   FSAHQDNKIRVW--GTEKYSNREYMQLATLPTLTDQVMNWIPTKNYVQVRRNKKCTWVHH 176
           FSAHQD+KIRVW    +   +++  +LATLPTL D+ +  +   N+VQ+RR+KKCTWVHH
Sbjct: 131 FSAHQDHKIRVWKINDQDPHHQKCTRLATLPTLGDRAIKLLTPNNHVQIRRHKKCTWVHH 190

Query: 177 VDAVSTLILSRDESLLYSASWDGTFKIWKTSNYRCLESIGNAHDDAINAIALSNNGFVYT 356
           VD VS L LS D SLLYS SWD + KIW+T++++CLES+GNAHDDAINA+ALS++G++YT
Sbjct: 191 VDTVSVLALSEDNSLLYSVSWDRSLKIWRTTDFKCLESVGNAHDDAINALALSHDGYIYT 250

Query: 357 ASADKTIKVWKKDPGAKKHSLVDTLEKHQSGVNALALRSNGATLYSGACDRSIVVWEKED 536
            SADKTIKVW+K P  KKHS V TLEKH SG+NALAL ++G+ LYSGA DRSIVVWEK+ 
Sbjct: 251 GSADKTIKVWRKAPEDKKHSQVATLEKHNSGINALALSTDGSVLYSGASDRSIVVWEKD- 309

Query: 537 XXXXXXXXKHMVVAGALRGHTKAILCLAIISDLVCSGSADNTVRIWRRGVGRSYSCLAVL 716
                    +MVV GALRGH+K+ILCLA++SD+V SGSADNT+RIW RG+ +SYSCLA+L
Sbjct: 310 ------YSGNMVVVGALRGHSKSILCLAVVSDVVFSGSADNTIRIW-RGIHKSYSCLAIL 362

Query: 717 EGHKGPVKCLTGIEN-YNXXXXXXXXXYLVY 806
           EGH GPVKCLT   + YN         YLVY
Sbjct: 363 EGHTGPVKCLTAATDCYN--PSNTSTSYLVY 391


Top