BLASTX nr result

ID: Cimicifuga21_contig00010420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010420
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21243.3| unnamed protein product [Vitis vinifera]              137   2e-30
ref|XP_002302824.1| predicted protein [Populus trichocarpa] gi|2...   135   9e-30
gb|ADE77588.1| unknown [Picea sitchensis]                             123   3e-26
ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat...   120   3e-25
emb|CBI21173.3| unnamed protein product [Vitis vinifera]              120   3e-25

>emb|CBI21243.3| unnamed protein product [Vitis vinifera]
          Length = 778

 Score =  137 bits (345), Expect = 2e-30
 Identities = 60/83 (72%), Positives = 71/83 (85%)
 Frame = +2

Query: 407 IQPDHITFVYVLSACSHSGLMEEGWRCFSSMTIEFGLTPRSEHYACMVDLLGRAGRLNEA 586
           I+PDHI FV VLSACSH GL+ EGW CF +M  +FG+TPR+EHYACMVDLLGRAGRL+EA
Sbjct: 395 IKPDHIAFVMVLSACSHGGLIAEGWECFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEA 454

Query: 587 RELIEHMPMKPDSGVWGSLLGAC 655
           +  IE MP+ PD+GVWG+LLGAC
Sbjct: 455 QAFIERMPITPDAGVWGALLGAC 477


>ref|XP_002302824.1| predicted protein [Populus trichocarpa] gi|222844550|gb|EEE82097.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score =  135 bits (339), Expect = 9e-30
 Identities = 57/83 (68%), Positives = 73/83 (87%)
 Frame = +2

Query: 407 IQPDHITFVYVLSACSHSGLMEEGWRCFSSMTIEFGLTPRSEHYACMVDLLGRAGRLNEA 586
           ++PDHITFV +LSACSHSGL+ EGW CF+SM  +FG+TPR EHYACMVD+LGRAG+L+EA
Sbjct: 306 VKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEA 365

Query: 587 RELIEHMPMKPDSGVWGSLLGAC 655
            + IE MP++P++ VWG+LLGAC
Sbjct: 366 CDFIERMPVRPNAAVWGALLGAC 388


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score =  123 bits (309), Expect = 3e-26
 Identities = 50/83 (60%), Positives = 70/83 (84%)
 Frame = +2

Query: 407 IQPDHITFVYVLSACSHSGLMEEGWRCFSSMTIEFGLTPRSEHYACMVDLLGRAGRLNEA 586
           ++P+ ITF+ VLSACSH+GL++EGW+C++ MT+++ +TP  EHYACMVDLLGRAG LNEA
Sbjct: 37  VKPNEITFISVLSACSHAGLVDEGWKCYNCMTLDYAITPTVEHYACMVDLLGRAGHLNEA 96

Query: 587 RELIEHMPMKPDSGVWGSLLGAC 655
            + IE MP++P + VWG+ LG+C
Sbjct: 97  WDFIEKMPIEPGASVWGAFLGSC 119


>ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  120 bits (300), Expect = 3e-25
 Identities = 54/83 (65%), Positives = 67/83 (80%)
 Frame = +2

Query: 407 IQPDHITFVYVLSACSHSGLMEEGWRCFSSMTIEFGLTPRSEHYACMVDLLGRAGRLNEA 586
           ++ DHITFV VL+ACSH GL+EEGW    SM  ++G+ PR EHYACM+DLLGRAGRL+EA
Sbjct: 503 VKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEA 562

Query: 587 RELIEHMPMKPDSGVWGSLLGAC 655
           + LIE MP +PD+ VW +LLGAC
Sbjct: 563 KALIEAMPFEPDAMVWKTLLGAC 585


>emb|CBI21173.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  120 bits (300), Expect = 3e-25
 Identities = 54/83 (65%), Positives = 67/83 (80%)
 Frame = +2

Query: 407 IQPDHITFVYVLSACSHSGLMEEGWRCFSSMTIEFGLTPRSEHYACMVDLLGRAGRLNEA 586
           ++ DHITFV VL+ACSH GL+EEGW    SM  ++G+ PR EHYACM+DLLGRAGRL+EA
Sbjct: 402 VKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEA 461

Query: 587 RELIEHMPMKPDSGVWGSLLGAC 655
           + LIE MP +PD+ VW +LLGAC
Sbjct: 462 KALIEAMPFEPDAMVWKTLLGAC 484


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