BLASTX nr result

ID: Cimicifuga21_contig00010409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010409
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332782.1| BED finger-nbs-lrr resistance protein [Popul...    89   4e-16
ref|XP_002332784.1| BED finger-nbs-lrr resistance protein [Popul...    86   2e-15
ref|XP_002325714.1| BED finger-nbs-lrr resistance protein [Popul...    86   3e-15
ref|XP_002317520.1| nbs-lrr resistance protein [Populus trichoca...    86   4e-15
ref|XP_002333828.1| BED finger-nbs resistance protein [Populus t...    86   4e-15

>ref|XP_002332782.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222833191|gb|EEE71668.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1214

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 48/109 (44%), Positives = 63/109 (57%)
 Frame = +3

Query: 3   DETRMIGVYGMGGVGKTTMIKEINNRLLDHKHCFDKVIWVTVSKNGNVHKLQHDIAKQVD 182
           DE   IG+YGMGGVGKTT++K I+N LL     +D V WVTVS++ N+++LQ+ IA Q+ 
Sbjct: 331 DEVPTIGIYGMGGVGKTTILKHIHNELLQRPDIYDHVWWVTVSQDFNINRLQNFIATQLH 390

Query: 183 PNLPSDLSIEQDETXXXXXXXXXXXXXXXXXXILDDMWEPFSLTEIGIP 329
            N    LS E D+                   ILDD+W  F L E+GIP
Sbjct: 391 LN----LSREDDDLHRAVKLSEELKRKQKWILILDDLWNNFELEEVGIP 435


>ref|XP_002332784.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222833193|gb|EEE71670.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1012

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 47/109 (43%), Positives = 62/109 (56%)
 Frame = +3

Query: 3   DETRMIGVYGMGGVGKTTMIKEINNRLLDHKHCFDKVIWVTVSKNGNVHKLQHDIAKQVD 182
           DE   IG+YGMGGVGKT ++K I+N LL     +D V WVTVS++ N+++LQ+ IA Q+ 
Sbjct: 367 DEVPTIGIYGMGGVGKTIILKHIHNELLQRPDIYDHVWWVTVSQDFNINRLQNLIATQLH 426

Query: 183 PNLPSDLSIEQDETXXXXXXXXXXXXXXXXXXILDDMWEPFSLTEIGIP 329
            N    LS E D+                   ILDD+W  F L E+GIP
Sbjct: 427 LN----LSREDDDLHRAAKLSEELKREQKWILILDDLWNNFELEEVGIP 471


>ref|XP_002325714.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862589|gb|EEF00096.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1010

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 48/109 (44%), Positives = 61/109 (55%)
 Frame = +3

Query: 3   DETRMIGVYGMGGVGKTTMIKEINNRLLDHKHCFDKVIWVTVSKNGNVHKLQHDIAKQVD 182
           DE   IG+YGMGGVGKT M++ I+N LL+ +     V WVTVS+N N+ +LQ  IAK + 
Sbjct: 189 DEVSTIGIYGMGGVGKTAMLQHIHNELLERRDISHCVYWVTVSQNFNIKRLQTCIAKCLG 248

Query: 183 PNLPSDLSIEQDETXXXXXXXXXXXXXXXXXXILDDMWEPFSLTEIGIP 329
            NL S    E DE                   ILDD+W  F+L E+GIP
Sbjct: 249 FNLSS----EDDELHRARKLLKELRKKQKWILILDDLWNTFNLHEVGIP 293


>ref|XP_002317520.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222860585|gb|EEE98132.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 802

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/109 (39%), Positives = 65/109 (59%)
 Frame = +3

Query: 3   DETRMIGVYGMGGVGKTTMIKEINNRLLDHKHCFDKVIWVTVSKNGNVHKLQHDIAKQVD 182
           D+   IG+YG+GGVGKT++++ IN++LL     F  V W+TV+++ +++KLQ+ IAK VD
Sbjct: 52  DDVLSIGIYGIGGVGKTSLLRHINDQLLQRPSSFQNVFWITVTQDFSIYKLQNLIAKAVD 111

Query: 183 PNLPSDLSIEQDETXXXXXXXXXXXXXXXXXXILDDMWEPFSLTEIGIP 329
                DLS E+DE                   ILDD+W  FS  ++G+P
Sbjct: 112 ----LDLSNEEDEKKRAVKLSNGLIAKKKFVLILDDLWNHFSPEKVGVP 156


>ref|XP_002333828.1| BED finger-nbs resistance protein [Populus trichocarpa]
           gi|222838647|gb|EEE77012.1| BED finger-nbs resistance
           protein [Populus trichocarpa]
          Length = 1153

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/109 (39%), Positives = 65/109 (59%)
 Frame = +3

Query: 3   DETRMIGVYGMGGVGKTTMIKEINNRLLDHKHCFDKVIWVTVSKNGNVHKLQHDIAKQVD 182
           D+   IG+YG+GGVGKT++++ IN++LL     F  V W+TV+++ +++KLQ+ IAK VD
Sbjct: 172 DDVLSIGIYGIGGVGKTSLLRHINDQLLQRPSSFQNVFWITVTQDFSIYKLQNLIAKAVD 231

Query: 183 PNLPSDLSIEQDETXXXXXXXXXXXXXXXXXXILDDMWEPFSLTEIGIP 329
                DLS E+DE                   ILDD+W  FS  ++G+P
Sbjct: 232 ----LDLSNEEDEKKRAVNLSNGLIAKKKFVLILDDLWNHFSPEKVGVP 276


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