BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010378
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloro...    92   3e-17
emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]    92   3e-17
ref|XP_002879729.1| plastid-specific ribosomal protein 4 [Arabid...    92   6e-17
ref|XP_004147884.1| PREDICTED: 30S ribosomal protein S31, chloro...    91   1e-16
ref|NP_181349.1| 30S ribosomal protein S31 [Arabidopsis thaliana...    90   2e-16

>ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Vitis
           vinifera] gi|297740225|emb|CBI30407.3| unnamed protein
           product [Vitis vinifera]
          Length = 118

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/64 (67%), Positives = 50/64 (78%)
 Frame = -3

Query: 359 LPSVYCGRGDRKTAKGKRFNHSFGNARPRNKNKXXXXXXXXXXPSPLKKDPFDDNDKIKL 180
           +PSVYCGRGD+KTAKGKRFNHSFGNARPRNK K          PSP KKD F+D++ +K+
Sbjct: 51  IPSVYCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKI 110

Query: 179 EIDE 168
           EIDE
Sbjct: 111 EIDE 114


>emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]
          Length = 117

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/64 (67%), Positives = 50/64 (78%)
 Frame = -3

Query: 359 LPSVYCGRGDRKTAKGKRFNHSFGNARPRNKNKXXXXXXXXXXPSPLKKDPFDDNDKIKL 180
           +PSVYCGRGD+KTAKGKRFNHSFGNARPRNK K          PSP KKD F+D++ +K+
Sbjct: 50  IPSVYCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKI 109

Query: 179 EIDE 168
           EIDE
Sbjct: 110 EIDE 113


>ref|XP_002879729.1| plastid-specific ribosomal protein 4 [Arabidopsis lyrata subsp.
           lyrata] gi|297325568|gb|EFH55988.1| plastid-specific
           ribosomal protein 4 [Arabidopsis lyrata subsp. lyrata]
          Length = 114

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 42/64 (65%), Positives = 51/64 (79%)
 Frame = -3

Query: 359 LPSVYCGRGDRKTAKGKRFNHSFGNARPRNKNKXXXXXXXXXXPSPLKKDPFDDNDKIKL 180
           +P VYCGRGDRKTAKGKRFNHSFGNARPRNKNK          P+P +KD F++++KIK+
Sbjct: 50  IPLVYCGRGDRKTAKGKRFNHSFGNARPRNKNKGRGPERVPVPPAPPRKDKFENDEKIKI 109

Query: 179 EIDE 168
           +IDE
Sbjct: 110 DIDE 113


>ref|XP_004147884.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Cucumis
           sativus] gi|449520074|ref|XP_004167059.1| PREDICTED: 30S
           ribosomal protein S31, chloroplastic-like [Cucumis
           sativus]
          Length = 118

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 40/64 (62%), Positives = 50/64 (78%)
 Frame = -3

Query: 359 LPSVYCGRGDRKTAKGKRFNHSFGNARPRNKNKXXXXXXXXXXPSPLKKDPFDDNDKIKL 180
           +P++YCGRGD+KT +GKRFNHS+GNARPR+K K          PSP +KD FDDN+KIK+
Sbjct: 50  IPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKI 109

Query: 179 EIDE 168
           EIDE
Sbjct: 110 EIDE 113


>ref|NP_181349.1| 30S ribosomal protein S31 [Arabidopsis thaliana]
           gi|75275034|sp|O80439.1|RR31_ARATH RecName: Full=30S
           ribosomal protein S31, chloroplastic; AltName:
           Full=Plastid-specific 30S ribosomal protein 4;
           Short=PSRP-4; Flags: Precursor
           gi|7578852|gb|AAF64153.1|AF236826_1 plastid-specific
           ribosomal protein 4 precursor [Arabidopsis thaliana]
           gi|3335362|gb|AAC27163.1| 30S ribosomal protein S31
           [Arabidopsis thaliana] gi|15529182|gb|AAK97685.1|
           At2g38140/F16M14.7 [Arabidopsis thaliana]
           gi|16974357|gb|AAL31104.1| At2g38140/F16M14.7
           [Arabidopsis thaliana] gi|21618289|gb|AAM67339.1| 30S
           ribosomal protein S31 [Arabidopsis thaliana]
           gi|330254400|gb|AEC09494.1| 30S ribosomal protein S31
           [Arabidopsis thaliana]
          Length = 118

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/64 (64%), Positives = 51/64 (79%)
 Frame = -3

Query: 359 LPSVYCGRGDRKTAKGKRFNHSFGNARPRNKNKXXXXXXXXXXPSPLKKDPFDDNDKIKL 180
           +P VYCGRGDRKTAKGKRFNHSFGNARPRNK+K          P+P +KD F++++KIK+
Sbjct: 50  IPLVYCGRGDRKTAKGKRFNHSFGNARPRNKSKGRGPERVPVPPAPPRKDKFENDEKIKI 109

Query: 179 EIDE 168
           +IDE
Sbjct: 110 DIDE 113