BLASTX nr result

ID: Cimicifuga21_contig00010349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010349
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17870.3| unnamed protein product [Vitis vinifera]              199   2e-49
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like...   199   2e-49
ref|XP_002511366.1| ring finger protein, putative [Ricinus commu...   180   1e-43
ref|XP_004162811.1| PREDICTED: RING-H2 finger protein ATL43-like...   179   2e-43
gb|ADK92879.1| ring H2 finger protein [Hypericum perforatum]          174   5e-42

>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score =  199 bits (507), Expect = 2e-49
 Identities = 96/118 (81%), Positives = 103/118 (87%)
 Frame = -1

Query: 356 RPNAAPFRPSIAVIVAVLTTMFSVTFLLLLYAKHCKGGNQGNANSTAQTLSTARRNSGID 177
           RPN +PFRPSIAVIV VLTTMFS+TFLLLLYAKHCK GN      T    S AR+NSGID
Sbjct: 46  RPNFSPFRPSIAVIVGVLTTMFSITFLLLLYAKHCKRGNGVVYTGTPPLSSAARKNSGID 105

Query: 176 RTVIESLPIFRFASLRGQKEGLECSVCLNRFEPNEVLRLLPKCKHAFHVECVDTWLDA 3
           RTVIESLP+FRFASLRGQK+GLEC+VCLNRFEP E+LRLLPKCKHAFHVECVDTWLDA
Sbjct: 106 RTVIESLPVFRFASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFHVECVDTWLDA 163


>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
          Length = 404

 Score =  199 bits (507), Expect = 2e-49
 Identities = 96/118 (81%), Positives = 103/118 (87%)
 Frame = -1

Query: 356 RPNAAPFRPSIAVIVAVLTTMFSVTFLLLLYAKHCKGGNQGNANSTAQTLSTARRNSGID 177
           RPN +PFRPSIAVIV VLTTMFS+TFLLLLYAKHCK GN      T    S AR+NSGID
Sbjct: 46  RPNFSPFRPSIAVIVGVLTTMFSITFLLLLYAKHCKRGNGVVYTGTPPLSSAARKNSGID 105

Query: 176 RTVIESLPIFRFASLRGQKEGLECSVCLNRFEPNEVLRLLPKCKHAFHVECVDTWLDA 3
           RTVIESLP+FRFASLRGQK+GLEC+VCLNRFEP E+LRLLPKCKHAFHVECVDTWLDA
Sbjct: 106 RTVIESLPVFRFASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFHVECVDTWLDA 163


>ref|XP_002511366.1| ring finger protein, putative [Ricinus communis]
           gi|223550481|gb|EEF51968.1| ring finger protein,
           putative [Ricinus communis]
          Length = 493

 Score =  180 bits (457), Expect = 1e-43
 Identities = 91/122 (74%), Positives = 100/122 (81%), Gaps = 6/122 (4%)
 Frame = -1

Query: 350 NAAPFRPSIAVIVAVLTTMFSVTFLLLLYAKHCKGG------NQGNANSTAQTLSTARRN 189
           +A PF+PSIAVIV VLTTMFS+T LLLLYAKHCK        N G   +  QT + AR+N
Sbjct: 71  SAPPFKPSIAVIVGVLTTMFSITLLLLLYAKHCKRAHIYNSFNNGGGGTGGQT-AEARKN 129

Query: 188 SGIDRTVIESLPIFRFASLRGQKEGLECSVCLNRFEPNEVLRLLPKCKHAFHVECVDTWL 9
           SGIDR VIESLPIFRF+SLRGQK+GLEC+VCL RFEP EVLRLLPKCKHAFHVECVDTWL
Sbjct: 130 SGIDRAVIESLPIFRFSSLRGQKDGLECAVCLTRFEPPEVLRLLPKCKHAFHVECVDTWL 189

Query: 8   DA 3
           DA
Sbjct: 190 DA 191


>ref|XP_004162811.1| PREDICTED: RING-H2 finger protein ATL43-like [Cucumis sativus]
          Length = 391

 Score =  179 bits (455), Expect = 2e-43
 Identities = 91/127 (71%), Positives = 100/127 (78%), Gaps = 9/127 (7%)
 Frame = -1

Query: 356 RPNAAPFRPSIAVIVAVLTTMFSVTFLLLLYAKHCKGGNQG---------NANSTAQTLS 204
           +P  +PFRPS+AV+V VLTT FS+TFLLLLYAKHCK GN           N      + S
Sbjct: 69  KPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKRGNAAVVVGYSMRPNTMMGVPSFS 128

Query: 203 TARRNSGIDRTVIESLPIFRFASLRGQKEGLECSVCLNRFEPNEVLRLLPKCKHAFHVEC 24
           T R+NSGID+TVIESLPIFRF SL GQKEGLEC+VCLNRFEP EVLRLLPKCKHAFHVEC
Sbjct: 129 T-RKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNRFEPTEVLRLLPKCKHAFHVEC 187

Query: 23  VDTWLDA 3
           VDTWLDA
Sbjct: 188 VDTWLDA 194


>gb|ADK92879.1| ring H2 finger protein [Hypericum perforatum]
          Length = 485

 Score =  174 bits (442), Expect = 5e-42
 Identities = 86/123 (69%), Positives = 100/123 (81%), Gaps = 6/123 (4%)
 Frame = -1

Query: 356 RPNAAPFRPSIAVIVAVLTTMFSVTFLLLLYAKHCKGGNQGNANSTA-----QTLSTARR 192
           R  A+P RP +AV+VAVLT +FS+TFLL+LYA+HCK G  G   S+A      TL+T R+
Sbjct: 66  RSEASPVRPGVAVVVAVLTCIFSITFLLVLYARHCKVGVTGGGTSSAGMTSAATLATGRK 125

Query: 191 NSGIDRTVIESLPIFRFASLRG-QKEGLECSVCLNRFEPNEVLRLLPKCKHAFHVECVDT 15
           NSGIDR V+ESLP+FRF SL G QKEGLEC+VCLNRFE +EVLRLLPKCKHAFHVECVDT
Sbjct: 126 NSGIDRAVVESLPVFRFGSLSGRQKEGLECAVCLNRFEGSEVLRLLPKCKHAFHVECVDT 185

Query: 14  WLD 6
           WLD
Sbjct: 186 WLD 188


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